RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 ARL1P40616 181 aaPredicted RBP15.2■□□□□ 0.02
RFFL-201ENST00000315249 TRPC3Q13507 836 aa15.2■□□□□ 0.02
RFFL-201ENST00000315249 KIF18AQ8NI77 898 aa15.2■□□□□ 0.02
RFFL-201ENST00000315249 PALLDQ8WX93 1383 aa15.2■□□□□ 0.02
RFFL-201ENST00000315249 ANKARQ7Z5J8 1434 aa15.2■□□□□ 0.02
RFFL-201ENST00000315249 SUPT20HL1Q3ZLR7 823 aa15.2■□□□□ 0.02
RFFL-201ENST00000315249 NACA2Q9H009 215 aa15.2■□□□□ 0.02
RFFL-201ENST00000315249 WDR44Q5JSH3 913 aa15.2■□□□□ 0.02
RFFL-201ENST00000315249 TRPC6Q9Y210 931 aa15.2■□□□□ 0.02
RFFL-201ENST00000315249 CALCRLQ16602 461 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 SPICE1Q8N0Z3 855 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.19■□□□□ 0.02
RFFL-201ENST00000315249 ERBB3P21860 1342 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 ADCY5O95622 1261 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 ARHGEF6Q15052 776 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 NBPF3Q9H094 633 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 TTC12Q9H892 705 aaPredicted RBP15.19■□□□□ 0.02
RFFL-201ENST00000315249 LEMD3Q9Y2U8 911 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 ARID4AP29374 1257 aaPredicted RBP15.19■□□□□ 0.02
RFFL-201ENST00000315249 RAPGEF1Q13905 1077 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 AOPEPQ8N6M6 819 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 TRAF5O00463 557 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 BBOX1O75936 387 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 ABCB5Q2M3G0 1257 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 PLVAPQ9BX97 442 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 PIM2Q9P1W9 311 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 SPATA31A3Q5VYP0 1347 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 GSDMDP57764 484 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 CMTR1Q8N1G2 835 aaKnown RBP15.19■□□□□ 0.02
RFFL-201ENST00000315249 RNF34Q969K3 372 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 SLC8A3P57103 927 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 ICA1Q05084 483 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 UBE4AQ14139 1066 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 CCDC50Q8IVM0 306 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 NEK11Q8NG66 645 aa15.19■□□□□ 0.02
RFFL-201ENST00000315249 EPB41P11171 864 aaKnown RBP15.18■□□□□ 0.02
RFFL-201ENST00000315249 RPL13P26373 211 aaKnown RBP15.18■□□□□ 0.02
RFFL-201ENST00000315249 UBXN1Q04323 297 aa15.18■□□□□ 0.02
RFFL-201ENST00000315249 MSANTD4Q8NCY6 345 aa15.18■□□□□ 0.02
RFFL-201ENST00000315249 TBC1D7Q9P0N9 293 aa15.18■□□□□ 0.02
RFFL-201ENST00000315249 GIGYF2Q6Y7W6 1299 aaKnown RBP15.18■□□□□ 0.02
RFFL-201ENST00000315249 NAA15Q9BXJ9 866 aaKnown RBP15.18■□□□□ 0.02
RFFL-201ENST00000315249 CSPG5O95196 566 aa15.18■□□□□ 0.02
RFFL-201ENST00000315249 PHKA1P46020 1223 aa15.18■□□□□ 0.02
RFFL-201ENST00000315249 LZTS2Q9BRK4 669 aa15.18■□□□□ 0.02
RFFL-201ENST00000315249 MAPK8IP1Q9UQF2 711 aa15.18■□□□□ 0.02
RFFL-201ENST00000315249 DTNBO60941 627 aa15.18■□□□□ 0.02
RFFL-201ENST00000315249 GNPTABQ3T906 1256 aa15.18■□□□□ 0.02
RFFL-201ENST00000315249 TPH2Q8IWU9 490 aa15.18■□□□□ 0.02
RFFL-201ENST00000315249 PLCB3Q01970 1234 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 KIAA0753Q2KHM9 967 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 PUS3Q9BZE2 481 aaKnown RBP15.17■□□□□ 0.02
RFFL-201ENST00000315249 MYOM2P54296 1465 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 ADORA1P30542 326 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 SMC5Q8IY18 1101 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 TSNARE1Q96NA8 513 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 A0A1B0GVL5 298 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 KRT9P35527 623 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 GJD4Q96KN9 370 aaPredicted RBP15.17■□□□□ 0.02
RFFL-201ENST00000315249 MBD5Q9P267 1494 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 KRT19P08727 400 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 UTP14CQ5TAP6 766 aaKnown RBP15.17■□□□□ 0.02
RFFL-201ENST00000315249 MIGA2Q7L4E1 593 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 C16orf45Q96MC5 204 aaPredicted RBP15.17■□□□□ 0.02
RFFL-201ENST00000315249 CWC15Q9P013 229 aaKnown RBP15.17■□□□□ 0.02
RFFL-201ENST00000315249 VPS54Q9P1Q0 977 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 DNM3Q9UQ16 869 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 BLMP54132 1417 aaPredicted RBP15.17■□□□□ 0.02
RFFL-201ENST00000315249 NPR1P16066 1061 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 CYLC1P35663 651 aaPredicted RBP15.17■□□□□ 0.02
RFFL-201ENST00000315249 MYCT1Q8N699 235 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 USP44Q9H0E7 712 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 KIAA0754O94854 1291 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 PDE4DQ08499 809 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 GSTA5Q7RTV2 222 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 GPR101Q96P66 508 aaPredicted RBP15.17■□□□□ 0.02
RFFL-201ENST00000315249 USP26Q9BXU7 913 aa15.17■□□□□ 0.02
RFFL-201ENST00000315249 PLCD1P51178 756 aa15.16■□□□□ 0.02
RFFL-201ENST00000315249 MAP2K1Q02750 393 aaPredicted RBP15.16■□□□□ 0.02
RFFL-201ENST00000315249 SNX29Q8TEQ0 813 aa15.16■□□□□ 0.02
RFFL-201ENST00000315249 DNAJC25Q9H1X3 360 aa15.16■□□□□ 0.02
RFFL-201ENST00000315249 PDE8BO95263 885 aa15.16■□□□□ 0.02
RFFL-201ENST00000315249 KCNJ14Q9UNX9 436 aa15.16■□□□□ 0.02
RFFL-201ENST00000315249 IKBKGQ9Y6K9 419 aa15.16■□□□□ 0.02
RFFL-201ENST00000315249 GAS7O60861 476 aa15.16■□□□□ 0.02
RFFL-201ENST00000315249 MAP9Q49MG5 647 aa15.16■□□□□ 0.02
RFFL-201ENST00000315249 ANO3Q9BYT9 981 aa15.16■□□□□ 0.02
RFFL-201ENST00000315249 CDC42BPAQ5VT25 1732 aa15.16■□□□□ 0.02
RFFL-201ENST00000315249 GOLGA8HP0CJ92 632 aa15.16■□□□□ 0.02
RFFL-201ENST00000315249 ATP5JP18859 108 aa15.16■□□□□ 0.02
RFFL-201ENST00000315249 CCPG1Q9ULG6 757 aa15.16■□□□□ 0.02
RFFL-201ENST00000315249 SMCO2A6NFE2 343 aa15.16■□□□□ 0.02
RFFL-201ENST00000315249 OSBPP22059 807 aa15.16■□□□□ 0.02
RFFL-201ENST00000315249 NONOQ15233 471 aaKnown RBP eCLIP15.16■□□□□ 0.02
RFFL-201ENST00000315249 REXO1Q8N1G1 1221 aaKnown RBP15.16■□□□□ 0.02
RFFL-201ENST00000315249 PDE6AP16499 860 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 HSPA1LP34931 641 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 SPAG1Q07617 926 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 CIAPIN1Q6FI81 312 aa15.15■□□□□ 0.02
RFFL-201ENST00000315249 IFNL3Q8IZI9 196 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms