RNA–Protein interactions for RNA: ENST00000313084.9

SEC16A-204, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SEC16A, Length 3,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-204ENST00000313084 DHX58Q96C10 678 aa11.46□□□□□ -0.57
SEC16A-204ENST00000313084 NLRP3Q96P20 1036 aa11.46□□□□□ -0.57
SEC16A-204ENST00000313084 MCM9Q9NXL9 1143 aa11.46□□□□□ -0.57
SEC16A-204ENST00000313084 CCNL1Q9UK58 526 aaPredicted RBP11.46□□□□□ -0.57
SEC16A-204ENST00000313084 KCNH3Q9ULD8 1083 aa11.46□□□□□ -0.57
SEC16A-204ENST00000313084 YEATS4O95619 227 aa11.46□□□□□ -0.57
SEC16A-204ENST00000313084 RASGRP2Q7LDG7 609 aa11.46□□□□□ -0.57
SEC16A-204ENST00000313084 DZIP1Q86YF9 867 aaKnown RBP11.46□□□□□ -0.57
SEC16A-204ENST00000313084 SMYD4Q8IYR2 804 aaPredicted RBP11.46□□□□□ -0.57
SEC16A-204ENST00000313084 ESR2Q92731 530 aa11.46□□□□□ -0.57
SEC16A-204ENST00000313084 DYNLL2Q96FJ2 89 aa11.46□□□□□ -0.57
SEC16A-204ENST00000313084 TSPY2A6NKD2 308 aa11.46□□□□□ -0.58
SEC16A-204ENST00000313084 RRP9O43818 475 aaKnown RBP11.46□□□□□ -0.58
SEC16A-204ENST00000313084 USP17L8P0C7I0 530 aa11.46□□□□□ -0.58
SEC16A-204ENST00000313084 PRR29P0C7W0 189 aa11.46□□□□□ -0.58
SEC16A-204ENST00000313084 EVCP57679 992 aa11.46□□□□□ -0.58
SEC16A-204ENST00000313084 RPS8P62241 208 aaKnown RBP11.46□□□□□ -0.58
SEC16A-204ENST00000313084 MECOMQ03112 1051 aa11.46□□□□□ -0.58
SEC16A-204ENST00000313084 EARS2Q5JPH6 523 aaKnown RBP11.46□□□□□ -0.58
SEC16A-204ENST00000313084 ENAHQ8N8S7 591 aaPredicted RBP11.46□□□□□ -0.58
SEC16A-204ENST00000313084 SLC44A5Q8NCS7 719 aa11.46□□□□□ -0.58
SEC16A-204ENST00000313084 PCDHA5Q9Y5H7 936 aa11.46□□□□□ -0.58
SEC16A-204ENST00000313084 SHANK3Q9BYB0 1731 aa11.45□□□□□ -0.58
SEC16A-204ENST00000313084 NWD2Q9ULI1 1742 aa11.45□□□□□ -0.58
SEC16A-204ENST00000313084 CDK11BP21127 795 aaKnown RBP11.45□□□□□ -0.58
SEC16A-204ENST00000313084 LRRC8AQ8IWT6 810 aa11.45□□□□□ -0.58
SEC16A-204ENST00000313084 RASGRP4Q8TDF6 673 aa11.45□□□□□ -0.58
SEC16A-204ENST00000313084 DPF2Q92785 391 aa11.45□□□□□ -0.58
SEC16A-204ENST00000313084 PLIN2Q99541 437 aa11.45□□□□□ -0.58
SEC16A-204ENST00000313084 CNNM2Q9H8M5 875 aa11.45□□□□□ -0.58
SEC16A-204ENST00000313084 UBR2Q8IWV8 1755 aa11.45□□□□□ -0.58
SEC16A-204ENST00000313084 F8W031 263 aaPredicted RBP11.45□□□□□ -0.58
SEC16A-204ENST00000313084 WNT7AO00755 349 aa11.45□□□□□ -0.58
SEC16A-204ENST00000313084 JMYQ8N9B5 988 aa11.45□□□□□ -0.58
SEC16A-204ENST00000313084 ZNF384Q8TF68 577 aa11.45□□□□□ -0.58
SEC16A-204ENST00000313084 EPSTI1Q96J88 318 aa11.45□□□□□ -0.58
SEC16A-204ENST00000313084 SERTAD1Q9UHV2 236 aa11.45□□□□□ -0.58
SEC16A-204ENST00000313084 STX8Q9UNK0 236 aa11.45□□□□□ -0.58
SEC16A-204ENST00000313084 ITGB4P16144 1822 aa11.45□□□□□ -0.58
SEC16A-204ENST00000313084 RAD21O60216 631 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 TOB1P50616 345 aaPredicted RBP11.44□□□□□ -0.58
SEC16A-204ENST00000313084 NFIXQ14938 502 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 MYRIPQ8NFW9 859 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 GPKOWQ92917 476 aaPredicted RBP eCLIP11.44□□□□□ -0.58
SEC16A-204ENST00000313084 EEF2KMTQ96G04 330 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 FANCLQ9NW38 375 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 MAPK8IP1Q9UQF2 711 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 COL4A1P02462 1669 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 TMEM232C9JQI7 657 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 CMA1P23946 247 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 HIBADHP31937 336 aaKnown RBP11.44□□□□□ -0.58
SEC16A-204ENST00000313084 USP5P45974 858 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 CATIPQ7Z7H3 387 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 IQCA1Q86XH1 822 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 RASSF8Q8NHQ8 419 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 UIMC1Q96RL1 719 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 BCL2L12Q9HB09 334 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 SPATA31A5Q5VU36 1347 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 SPATA31A7Q8IWB4 1347 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 DISP2A7MBM2 1401 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 VWA3AA6NCI4 1184 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 MMP1P03956 469 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 GOLGA8HP0CJ92 632 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 RFC4P35249 363 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 METTL16Q86W50 562 aaKnown RBP11.44□□□□□ -0.58
SEC16A-204ENST00000313084 HOMER1Q86YM7 354 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 FOXP4Q8IVH2 680 aaPredicted RBP11.44□□□□□ -0.58
SEC16A-204ENST00000313084 CRACR2BQ8N4Y2 399 aaPredicted RBP11.44□□□□□ -0.58
SEC16A-204ENST00000313084 KRI1Q8N9T8 703 aaKnown RBP11.44□□□□□ -0.58
SEC16A-204ENST00000313084 CPLX3Q8WVH0 158 aa11.44□□□□□ -0.58
SEC16A-204ENST00000313084 RNF41Q9H4P4 317 aaPredicted RBP11.44□□□□□ -0.58
SEC16A-204ENST00000313084 A0A1W2PQ27 194 aa11.43□□□□□ -0.58
SEC16A-204ENST00000313084 A0A1W2PQ64 194 aa11.43□□□□□ -0.58
SEC16A-204ENST00000313084 A0A1W2PQD8 194 aa11.43□□□□□ -0.58
SEC16A-204ENST00000313084 FMNL1O95466 1100 aaPredicted RBP11.43□□□□□ -0.58
SEC16A-204ENST00000313084 CBX1P83916 185 aa11.43□□□□□ -0.58
SEC16A-204ENST00000313084 PDE4BQ07343 736 aa11.43□□□□□ -0.58
SEC16A-204ENST00000313084 GRIK5Q16478 980 aa11.43□□□□□ -0.58
SEC16A-204ENST00000313084 MEX3CQ5U5Q3 659 aaKnown RBP11.43□□□□□ -0.58
SEC16A-204ENST00000313084 OLFM4Q6UX06 510 aa11.43□□□□□ -0.58
SEC16A-204ENST00000313084 ZSCAN10Q96SZ4 725 aaPredicted RBP11.43□□□□□ -0.58
SEC16A-204ENST00000313084 CSRNP2Q9H175 543 aa11.43□□□□□ -0.58
SEC16A-204ENST00000313084 VAT1LQ9HCJ6 419 aa11.43□□□□□ -0.58
SEC16A-204ENST00000313084 NUP98P52948 1817 aa11.43□□□□□ -0.58
SEC16A-204ENST00000313084 ADAMTS3O15072 1205 aa11.43□□□□□ -0.58
SEC16A-204ENST00000313084 MCM7P33993 719 aa11.43□□□□□ -0.58
SEC16A-204ENST00000313084 UBASH3AP57075 661 aa11.43□□□□□ -0.58
SEC16A-204ENST00000313084 TPM4P67936 248 aa11.43□□□□□ -0.58
SEC16A-204ENST00000313084 PTPAQ15257 358 aa11.43□□□□□ -0.58
SEC16A-204ENST00000313084 STAG1Q8WVM7 1258 aa11.43□□□□□ -0.58
SEC16A-204ENST00000313084 RTCBQ9Y3I0 505 aaKnown RBP11.43□□□□□ -0.58
SEC16A-204ENST00000313084 AKAP11Q9UKA4 1901 aa11.43□□□□□ -0.58
SEC16A-204ENST00000313084 DYNC1I1O14576 645 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 IFNAR1P17181 557 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 SFPQP23246 707 aaKnown RBP eCLIP11.42□□□□□ -0.58
SEC16A-204ENST00000313084 LIFRP42702 1097 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 FANCCQ00597 558 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 CTR9Q6PD62 1173 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 PIK3AP1Q6ZUJ8 805 aa11.42□□□□□ -0.58
SEC16A-204ENST00000313084 SGMS1Q86VZ5 419 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms