RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 ARMT1Q9H993 441 aa11.09□□□□□ -0.63
LSMEM1-201ENST00000312849 TRMT1Q9NXH9 659 aaKnown RBP11.09□□□□□ -0.63
LSMEM1-201ENST00000312849 SLC4A4Q9Y6R1 1079 aa11.09□□□□□ -0.63
LSMEM1-201ENST00000312849 RXRAP19793 462 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 METTL16Q86W50 562 aaKnown RBP11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 VSTM4Q8IW00 320 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 CRACR2BQ8N4Y2 399 aaPredicted RBP11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 MLKLQ8NB16 471 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 HELBQ8NG08 1087 aaPredicted RBP11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 PPP1R13BQ96KQ4 1090 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 CCDC87Q9NVE4 849 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 ANAPC4Q9UJX5 808 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 DLEC1Q9Y238 1755 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 PCP11498 1178 aaKnown RBP11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 XBP1P17861 261 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 MDM2Q00987 491 aaPredicted RBP11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 PNOCQ13519 176 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 LONRF3Q496Y0 759 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 NT5DC1Q5TFE4 455 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 SUSD4Q5VX71 490 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 DIS3L2Q8IYB7 885 aaKnown RBP11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 NKX2-3Q8TAU0 364 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 CLIC6Q96NY7 704 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 ARID3AQ99856 593 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 BCL11BQ9C0K0 894 aaPredicted RBP11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 HSD3B7Q9H2F3 369 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 L2HGDHQ9H9P8 463 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 GNL3LQ9NVN8 582 aaKnown RBP11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 PCDHA5Q9Y5H7 936 aa11.08□□□□□ -0.64
LSMEM1-201ENST00000312849 PHLPP2Q6ZVD8 1323 aa11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 BMP15O95972 392 aa11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 CBX1P83916 185 aa11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 DMTNQ08495 405 aa11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 CFAP100Q494V2 611 aa11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 TMED8Q6PL24 325 aaPredicted RBP11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 ZNF654Q8IZM8 581 aa11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 STK11IPQ8N1F8 1099 aa11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 FANCBQ8NB91 859 aa11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 ESR2Q92731 530 aa11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 UBAC1Q9BSL1 405 aa11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 MYL10Q9BUA6 226 aa11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 RNF26Q9BY78 433 aaPredicted RBP11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 TMX1Q9H3N1 280 aa11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 LRP2BPQ9P2M1 347 aa11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 FBXO2Q9UK22 296 aaPredicted RBP11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 SRPRBQ9Y5M8 271 aaKnown RBP11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 SLIT2O94813 1529 aa11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 A0A1B0GUL6 1792 aa11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 MYH2Q9UKX2 1941 aa11.07□□□□□ -0.64
LSMEM1-201ENST00000312849 GOLGA6L9A6NEM1 432 aa11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 BTBD18B2RXH4 712 aa11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 ZSCAN12O43309 604 aa11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 TOP1P11387 765 aaKnown RBP11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 TOB1P50616 345 aaPredicted RBP11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 AKAP17AQ02040 695 aaKnown RBP11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 POSTNQ15063 836 aa11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 LCORLQ8N3X6 602 aa11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 ENOX1Q8TC92 643 aaKnown RBP11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 SMARCE1Q969G3 411 aa11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 SRRTQ9BXP5 876 aaKnown RBP11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 TOMM22Q9NS69 142 aa11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 ZNF215Q9UL58 517 aaPredicted RBP11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 ZNF335Q9H4Z2 1342 aaPredicted RBP11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 CALM1P0DP23 149 aa11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 CALM2P0DP24 149 aa11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 CALM3P0DP25 149 aa11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 ATP1A3P13637 1013 aa11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 SARSP49591 514 aaKnown RBP11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 PPARAQ07869 468 aa11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 RRP12Q5JTH9 1297 aaKnown RBP11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 ISM2Q6H9L7 571 aa11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 INTS5Q6P9B9 1019 aaKnown RBP11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 INCENPQ9NQS7 918 aa11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 DDX41Q9UJV9 622 aaKnown RBP11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 MAN1B1Q9UKM7 699 aa11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 TACC3Q9Y6A5 838 aa11.06□□□□□ -0.64
LSMEM1-201ENST00000312849 MAGEB6P1A0A0J9YX57 407 aa11.05□□□□□ -0.64
LSMEM1-201ENST00000312849 ARHGAP6O43182 974 aa11.05□□□□□ -0.64
LSMEM1-201ENST00000312849 PRKAB2O43741 272 aa11.05□□□□□ -0.64
LSMEM1-201ENST00000312849 CAMTA2O94983 1202 aa11.05□□□□□ -0.64
LSMEM1-201ENST00000312849 CYP7A1P22680 504 aa11.05□□□□□ -0.64
LSMEM1-201ENST00000312849 ERCC5P28715 1186 aaPredicted RBP11.05□□□□□ -0.64
LSMEM1-201ENST00000312849 BCAMP50895 628 aa11.05□□□□□ -0.64
LSMEM1-201ENST00000312849 ETF1P62495 437 aaKnown RBP11.05□□□□□ -0.64
LSMEM1-201ENST00000312849 MORC3Q14149 939 aa11.05□□□□□ -0.64
LSMEM1-201ENST00000312849 CCDC93Q567U6 631 aa11.05□□□□□ -0.64
LSMEM1-201ENST00000312849 FOXP4Q8IVH2 680 aaPredicted RBP11.05□□□□□ -0.64
LSMEM1-201ENST00000312849 SYTL4Q96C24 671 aaPredicted RBP11.05□□□□□ -0.64
LSMEM1-201ENST00000312849 RBM28Q9NW13 759 aaKnown RBP11.05□□□□□ -0.64
LSMEM1-201ENST00000312849 FANCLQ9NW38 375 aa11.05□□□□□ -0.64
LSMEM1-201ENST00000312849 AATFQ9NY61 560 aaKnown RBP eCLIP11.05□□□□□ -0.64
LSMEM1-201ENST00000312849 ZNF652Q9Y2D9 606 aa11.05□□□□□ -0.64
LSMEM1-201ENST00000312849 ZNF804BA4D1E1 1349 aa11.05□□□□□ -0.64
LSMEM1-201ENST00000312849 COL16A1Q07092 1604 aaPredicted RBP11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 ZSCAN20P17040 1043 aaPredicted RBP11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 CHRNDQ07001 517 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 TBX2Q13207 712 aaPredicted RBP11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 SEC23AQ15436 765 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 SYT10Q6XYQ8 523 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 HOMER1Q86YM7 354 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms