RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 LAMB1P07942 1786 aa10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 WTIPA6NIX2 430 aaPredicted RBP10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 FIBPO43427 364 aa10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 PDE8BO95263 885 aa10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 FGAP02671 866 aa10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 PDIA3P30101 505 aaKnown RBP10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 ADD2P35612 726 aa10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 PEX19P40855 299 aa10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 ERCC6LQ2NKX8 1250 aa10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 CHST3Q7LGC8 479 aa10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 SNX1Q13596 522 aa10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 LARP1BQ659C4 914 aaKnown RBP10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 RBM43Q6ZSC3 357 aaKnown RBP10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 FERMT3Q86UX7 667 aa10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 N4BP2L2Q92802 583 aaPredicted RBP10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 SRRTQ9BXP5 876 aaKnown RBP10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 SEC31BQ9NQW1 1179 aa10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 FHOD1Q9Y613 1164 aa10.92□□□□□ -0.66
RBFOX1-201ENST00000311745 FKBP4Q02790 459 aaKnown RBP eCLIP10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 TMCO3Q6UWJ1 677 aa10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 AMIGO3Q86WK7 504 aa10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 PROCA1Q8NCQ7 364 aaPredicted RBP10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 ERCC4Q92889 916 aaPredicted RBP10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 ACSBG1Q96GR2 724 aa10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 FAXDC2Q96IV6 333 aa10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 AKAP2Q9Y2D5 859 aa10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 MAST2Q6P0Q8 1798 aa10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 IRX1P78414 480 aaPredicted RBP10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 CCDC183Q5T5S1 534 aa10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 GORABQ5T7V8 394 aa10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 ARL10Q8N8L6 244 aa10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 SYAP1Q96A49 352 aaPredicted RBP10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 DDX11Q96FC9 970 aa10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 NCOA5Q9HCD5 579 aaKnown RBP10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 CCDC87Q9NVE4 849 aa10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 WWC3Q9ULE0 1092 aa10.91□□□□□ -0.66
RBFOX1-201ENST00000311745 LOC102724428A0A0B4J2F2 783 aa10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 ACTN2P35609 894 aa10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 CLCN6P51797 869 aa10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 SIK1P57059 783 aa10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 CCDC102BQ68D86 513 aa10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 TBC1D10CQ8IV04 446 aa10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 LINC00116Q8NCU8 138 aa10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 APPBP2Q92624 585 aa10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 MRFAP1L1Q96HT8 127 aa10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 RMI1Q9H9A7 625 aa10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 FAM53CQ9NYF3 392 aa10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 CDK5RAP2Q96SN8 1893 aa10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 BAZ2AQ9UIF9 1905 aaKnown RBP10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 NEDD4P46934 1319 aa10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 VPS37CA5D8V6 355 aaPredicted RBP10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 KINO60870 393 aaKnown RBP10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 TTC39AQ5SRH9 613 aa10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 LDHAL6AQ6ZMR3 332 aa10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 ANKRD23Q86SG2 305 aa10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 SENP2Q9HC62 589 aa10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 TRMT112Q9UI30 125 aaKnown RBP10.9□□□□□ -0.66
RBFOX1-201ENST00000311745 SKAP2O75563 359 aaPredicted RBP10.9□□□□□ -0.67
RBFOX1-201ENST00000311745 SEC31AO94979 1220 aaKnown RBP10.9□□□□□ -0.67
RBFOX1-201ENST00000311745 ADAMTS2O95450 1211 aa10.9□□□□□ -0.67
RBFOX1-201ENST00000311745 ATP2B2Q01814 1243 aa10.9□□□□□ -0.67
RBFOX1-201ENST00000311745 FMNL3Q8IVF7 1028 aa10.9□□□□□ -0.67
RBFOX1-201ENST00000311745 KLHL23Q8NBE8 558 aa10.9□□□□□ -0.67
RBFOX1-201ENST00000311745 LEO1Q8WVC0 666 aaPredicted RBP10.9□□□□□ -0.67
RBFOX1-201ENST00000311745 TRIM6Q9C030 488 aaPredicted RBP10.9□□□□□ -0.67
RBFOX1-201ENST00000311745 FTOQ9C0B1 505 aaKnown RBP eCLIP10.9□□□□□ -0.67
RBFOX1-201ENST00000311745 VEZTQ9HBM0 779 aa10.9□□□□□ -0.67
RBFOX1-201ENST00000311745 EPB41L4AQ9HCS5 686 aaPredicted RBP10.9□□□□□ -0.67
RBFOX1-201ENST00000311745 ANKRD18BA2A2Z9 1011 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 IVLP07476 585 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 MYBL2P10244 700 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 METTL24Q5JXM2 366 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 ATL2Q8NHH9 583 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 LLPHQ9BRT6 129 aaKnown RBP10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 EME2A4GXA9 379 aaPredicted RBP10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 GPAA1O43292 621 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 ABCD1P33897 745 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 GCKP35557 465 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 LIG3P49916 1009 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 CCNHP51946 323 aaPredicted RBP10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 WWC2Q6AWC2 1192 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 CPLX2Q6PUV4 134 aaKnown RBP10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 SMIM5Q71RC9 77 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 CYB5R4Q7L1T6 521 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 CCDC186Q7Z3E2 898 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 CTCFLQ8NI51 663 aaPredicted RBP10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 ZNF274Q96GC6 653 aaPredicted RBP10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 UBR3Q6ZT12 1888 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 PAX3P23760 479 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 NF2P35240 595 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 RDXP35241 583 aaKnown RBP10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 DDB1Q16531 1140 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 CCDC158Q5M9N0 1113 aa10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 RPUSD2Q8IZ73 545 aaKnown RBP10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 HELBQ8NG08 1087 aaPredicted RBP10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 SYTL4Q96C24 671 aaPredicted RBP10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 CDCA7Q9BWT1 371 aaPredicted RBP10.89□□□□□ -0.67
RBFOX1-201ENST00000311745 CARMIL3Q8ND23 1372 aa10.88□□□□□ -0.67
RBFOX1-201ENST00000311745 PTPDC1A2A3K4 754 aa10.88□□□□□ -0.67
RBFOX1-201ENST00000311745 RASGRF1Q13972 1273 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms