RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 TSPAN18Q96SJ8 248 aa9.85□□□□□ -0.83
CHD6-201ENST00000309279 ASTN2O75129 1339 aaPredicted RBP9.85□□□□□ -0.83
CHD6-201ENST00000309279 TCRBV5S4A2TA0A5A2 114 aa9.84□□□□□ -0.83
CHD6-201ENST00000309279 EPB41L2O43491 1005 aaKnown RBP9.84□□□□□ -0.83
CHD6-201ENST00000309279 PDE6AP16499 860 aa9.84□□□□□ -0.83
CHD6-201ENST00000309279 ADD2P35612 726 aa9.84□□□□□ -0.83
CHD6-201ENST00000309279 RHBDL3P58872 404 aa9.84□□□□□ -0.83
CHD6-201ENST00000309279 PPP4CP60510 307 aa9.84□□□□□ -0.83
CHD6-201ENST00000309279 UBE3CQ15386 1083 aa9.84□□□□□ -0.83
CHD6-201ENST00000309279 SPDYE2Q495Y8 402 aa9.84□□□□□ -0.83
CHD6-201ENST00000309279 ANGEL2Q5VTE6 544 aaKnown RBP9.84□□□□□ -0.83
CHD6-201ENST00000309279 FKBP1CQ5VVH2 108 aa9.84□□□□□ -0.83
CHD6-201ENST00000309279 CHADLQ6NUI6 762 aa9.84□□□□□ -0.83
CHD6-201ENST00000309279 ADGRA1Q86SQ6 560 aa9.84□□□□□ -0.83
CHD6-201ENST00000309279 MAGEB6Q8N7X4 407 aa9.84□□□□□ -0.83
CHD6-201ENST00000309279 CXorf38Q8TB03 319 aa9.84□□□□□ -0.83
CHD6-201ENST00000309279 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.84□□□□□ -0.832e-6■■■□□ 17.1
CHD6-201ENST00000309279 TDRD3Q9H7E2 651 aaKnown RBP9.84□□□□□ -0.83
CHD6-201ENST00000309279 AK9Q5TCS8 1911 aa9.83□□□□□ -0.84
CHD6-201ENST00000309279 NRDCO43847 1150 aa9.83□□□□□ -0.84
CHD6-201ENST00000309279 ITGBL1O95965 494 aaPredicted RBP9.83□□□□□ -0.84
CHD6-201ENST00000309279 ZFYP08048 801 aaPredicted RBP9.83□□□□□ -0.84
CHD6-201ENST00000309279 CYP7A1P22680 504 aa9.83□□□□□ -0.84
CHD6-201ENST00000309279 LRRFIP1Q32MZ4 808 aaKnown RBP9.83□□□□□ -0.84
CHD6-201ENST00000309279 TTC22Q5TAA0 569 aa9.83□□□□□ -0.84
CHD6-201ENST00000309279 ZSCAN25Q6NSZ9 544 aa9.83□□□□□ -0.84
CHD6-201ENST00000309279 CDC42EP5Q6NZY7 148 aa9.83□□□□□ -0.84
CHD6-201ENST00000309279 CNTROBQ8N137 903 aa9.83□□□□□ -0.84
CHD6-201ENST00000309279 SMC1BQ8NDV3 1235 aa9.83□□□□□ -0.84
CHD6-201ENST00000309279 DCPSQ96C86 337 aaKnown RBP9.83□□□□□ -0.84
CHD6-201ENST00000309279 GGA3Q9NZ52 723 aa9.83□□□□□ -0.84
CHD6-201ENST00000309279 ZNF70Q9UC06 446 aaPredicted RBP9.83□□□□□ -0.84
CHD6-201ENST00000309279 CLEC11AQ9Y240 323 aa9.83□□□□□ -0.84
CHD6-201ENST00000309279 ZNF532Q9HCE3 1301 aa9.83□□□□□ -0.84
CHD6-201ENST00000309279 STK25O00506 426 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 BAG3O95817 575 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 GSPT1P15170 499 aaKnown RBP9.82□□□□□ -0.84
CHD6-201ENST00000309279 BTDP43251 543 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 FSTL1Q12841 308 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 C4orf46Q504U0 113 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 MAP1SQ66K74 1059 aaPredicted RBP9.82□□□□□ -0.84
CHD6-201ENST00000309279 SMYD5Q6GMV2 418 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 CDC37L1Q7L3B6 337 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 IDI2Q9BXS1 227 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 JADE2Q9NQC1 790 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 RYDENQ9NUL5 291 aaKnown RBP9.82□□□□□ -0.84
CHD6-201ENST00000309279 USP40Q9NVE5 1235 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 CDK5RAP2Q96SN8 1893 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 CLRN2A0PK11 232 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 RNF113AO15541 343 aaKnown RBP9.82□□□□□ -0.84
CHD6-201ENST00000309279 CHGBP05060 677 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 PLCG2P16885 1265 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 TNFAIP1Q13829 316 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 KRT26Q7Z3Y9 468 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 FAM83AQ86UY5 434 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 SKAP1Q86WV1 359 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 APOBEC3FQ8IUX4 373 aaKnown RBP9.82□□□□□ -0.84
CHD6-201ENST00000309279 SULF1Q8IWU6 871 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 CEP120Q8N960 986 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 RIOK1Q9BRS2 568 aaKnown RBP9.82□□□□□ -0.84
CHD6-201ENST00000309279 FSD1Q9BTV5 496 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 DEFB129Q9H1M3 183 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 AATFQ9NY61 560 aaKnown RBP eCLIP9.82□□□□□ -0.84
CHD6-201ENST00000309279 COMMD10Q9Y6G5 202 aa9.82□□□□□ -0.84
CHD6-201ENST00000309279 RFX7Q2KHR2 1363 aa9.81□□□□□ -0.84
CHD6-201ENST00000309279 FOCADQ5VW36 1801 aa9.81□□□□□ -0.84
CHD6-201ENST00000309279 TRIM6-TRIM34B2RNG4 842 aa9.81□□□□□ -0.84
CHD6-201ENST00000309279 WDHD1O75717 1129 aaPredicted RBP9.81□□□□□ -0.84
CHD6-201ENST00000309279 SLFNL1Q499Z3 407 aa9.81□□□□□ -0.84
CHD6-201ENST00000309279 ZNF280DQ6N043 979 aa9.81□□□□□ -0.84
CHD6-201ENST00000309279 APPBP2Q92624 585 aa9.81□□□□□ -0.84
CHD6-201ENST00000309279 NOL10Q9BSC4 688 aaKnown RBP9.81□□□□□ -0.84
CHD6-201ENST00000309279 PPP2R3BQ9Y5P8 575 aa9.81□□□□□ -0.84
CHD6-201ENST00000309279 PASKQ96RG2 1323 aa9.81□□□□□ -0.84
CHD6-201ENST00000309279 CNTNAP1P78357 1384 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 MAGEB6P1A0A0J9YX57 407 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 TBC1D12O60347 775 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 SDSP20132 328 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 IGBP1P78318 339 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 NFIAQ12857 509 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 BMP2KLQ5H9B9 411 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 ZMYM1Q5SVZ6 1142 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 NOP9Q86U38 636 aaKnown RBP9.8□□□□□ -0.84
CHD6-201ENST00000309279 USP48Q86UV5 1035 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 MIGA1Q8NAN2 632 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 OSBP2Q969R2 916 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 RILPL2Q969X0 211 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 GLIS2Q9BZE0 524 aaPredicted RBP9.8□□□□□ -0.84
CHD6-201ENST00000309279 PUS7LQ9H0K6 701 aaKnown RBP9.8□□□□□ -0.84
CHD6-201ENST00000309279 VEZTQ9HBM0 779 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 TMOD2Q9NZR1 351 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 GABBR1Q9UBS5 961 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 FAM198AQ9UFP1 575 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 NUB1Q9Y5A7 615 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 TRPM7Q96QT4 1865 aa9.8□□□□□ -0.84
CHD6-201ENST00000309279 TCP10L2B9ZVM9 353 aa9.79□□□□□ -0.84
CHD6-201ENST00000309279 ADM5C9JUS6 153 aa9.79□□□□□ -0.84
CHD6-201ENST00000309279 ENTPD3O75355 529 aa9.79□□□□□ -0.84
CHD6-201ENST00000309279 BDNFP23560 247 aa9.79□□□□□ -0.84
CHD6-201ENST00000309279 TNNI2P48788 182 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms