RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 LMTK3Q96Q04 1460 aa9.25□□□□□ -0.93
PPARGC1B-201ENST00000309241 CETN3O15182 167 aa9.25□□□□□ -0.93
PPARGC1B-201ENST00000309241 DRC3Q9H069 523 aa9.25□□□□□ -0.93
PPARGC1B-201ENST00000309241 RTCBQ9Y3I0 505 aaKnown RBP9.25□□□□□ -0.93
PPARGC1B-201ENST00000309241 FLOT1O75955 427 aa9.25□□□□□ -0.93
PPARGC1B-201ENST00000309241 HSPA8P11142 646 aaKnown RBP9.25□□□□□ -0.93
PPARGC1B-201ENST00000309241 CYP7A1P22680 504 aa9.25□□□□□ -0.93
PPARGC1B-201ENST00000309241 GINS2Q9Y248 185 aa9.25□□□□□ -0.93
PPARGC1B-201ENST00000309241 ZNF131P52739 623 aa9.25□□□□□ -0.93
PPARGC1B-201ENST00000309241 KRT28Q7Z3Y7 464 aa9.25□□□□□ -0.93
PPARGC1B-201ENST00000309241 ITGB1BP2Q9UKP3 347 aa9.25□□□□□ -0.93
PPARGC1B-201ENST00000309241 ASIC1P78348 528 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 GPR162Q16538 588 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 MUM1Q2TAK8 710 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 ESR2Q92731 530 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 ZC3H12CQ9C0D7 883 aaKnown RBP9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 SPC25Q9HBM1 224 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 USP16Q9Y5T5 823 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 WDR7Q9Y4E6 1490 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 LRRD1A4D1F6 860 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 SMIM23A6NLE4 172 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 ATP5J2-PTCD1G3V325 749 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 GNAT2P19087 354 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 PSMD2Q13200 908 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 NAA16Q6N069 864 aaPredicted RBP9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 KARSQ15046 597 aaKnown RBP9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 FAM71BQ8TC56 605 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 HVCN1Q96D96 273 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 COG7P83436 770 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 CALCOCO2Q13137 446 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 FAM169AQ9Y6X4 670 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 STK10O94804 968 aaKnown RBP9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 HARSP12081 509 aaKnown RBP9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 LGSNQ5TDP6 509 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 IFNL2Q8IZJ0 200 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 STAG1Q8WVM7 1258 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 ZNF189O75820 626 aaPredicted RBP9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 RAB11FIP4Q86YS3 637 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 NCOA7Q8NI08 942 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 CCDC8Q9H0W5 538 aaPredicted RBP9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 UBASH3AP57075 661 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 RRP36Q96EU6 259 aaKnown RBP9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 MRGBPQ9NV56 204 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 RNF14Q9UBS8 474 aa9.24□□□□□ -0.93
PPARGC1B-201ENST00000309241 RTL9Q8NET4 1388 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 UQCRFS1P1P0C7P4 283 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 ZSCAN20P17040 1043 aaPredicted RBP9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 CCT5P48643 541 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 EXOC4Q96A65 974 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 SMARCA5O60264 1052 aaPredicted RBP9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 LMNB2Q03252 620 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 CCDC84Q86UT8 332 aaPredicted RBP9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 TSC22D3Q99576 134 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 SEC24BO95487 1268 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 RARSP54136 660 aaKnown RBP9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 EIF6P56537 245 aaKnown RBP9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 DUOX2Q9NRD8 1548 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 DDB1Q16531 1140 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 RTN1Q16799 776 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 POLR3AO14802 1390 aaPredicted RBP9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 KIAA0586Q9BVV6 1533 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 E7EVH7 732 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 NUCB1Q02818 461 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 SEMA3FQ13275 785 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 CCDC62Q6P9F0 684 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 PRDM4Q9UKN5 801 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 TRAPPC8Q9Y2L5 1435 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 GNGT1P63211 74 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 PAK2Q13177 524 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 INTS8Q75QN2 995 aaKnown RBP9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 SRGAP1Q7Z6B7 1085 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 CCDC125Q86Z20 511 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 TMTC1Q8IUR5 882 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 CCDC68Q9H2F9 335 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 DDX41Q9UJV9 622 aaKnown RBP9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 AMOTL2Q9Y2J4 779 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 CHRNA2Q15822 529 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 PRPF38AQ8NAV1 312 aaKnown RBP9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 PKD2L1Q9P0L9 805 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 NIP7Q9Y221 180 aaKnown RBP eCLIP9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 PSMD7P51665 324 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 TMED1Q13445 227 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 RBM17Q96I25 401 aaKnown RBP9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 EPSTI1Q96J88 318 aa9.23□□□□□ -0.93
PPARGC1B-201ENST00000309241 PLCB4Q15147 1175 aa9.22□□□□□ -0.93
PPARGC1B-201ENST00000309241 TTC22Q5TAA0 569 aa9.22□□□□□ -0.93
PPARGC1B-201ENST00000309241 THUMPD2Q9BTF0 503 aaKnown RBP9.22□□□□□ -0.93
PPARGC1B-201ENST00000309241 CAPS2Q9BXY5 557 aa9.22□□□□□ -0.93
PPARGC1B-201ENST00000309241 MAN1A1P33908 653 aa9.22□□□□□ -0.93
PPARGC1B-201ENST00000309241 ARID5AQ03989 594 aa9.22□□□□□ -0.93
PPARGC1B-201ENST00000309241 CD109Q6YHK3 1445 aa9.22□□□□□ -0.93
PPARGC1B-201ENST00000309241 GOLGA8KD6RF30 607 aa9.22□□□□□ -0.93
PPARGC1B-201ENST00000309241 STX10O60499 249 aa9.22□□□□□ -0.93
PPARGC1B-201ENST00000309241 SEC31AO94979 1220 aaKnown RBP9.22□□□□□ -0.93
PPARGC1B-201ENST00000309241 FBXO38Q6PIJ6 1188 aa9.22□□□□□ -0.93
PPARGC1B-201ENST00000309241 POLE3Q9NRF9 147 aa9.22□□□□□ -0.93
PPARGC1B-201ENST00000309241 SNRPA1P09661 255 aaKnown RBP9.22□□□□□ -0.93
PPARGC1B-201ENST00000309241 TMX3Q96JJ7 454 aa9.22□□□□□ -0.93
PPARGC1B-201ENST00000309241 PARD3Q8TEW0 1356 aa9.22□□□□□ -0.93
PPARGC1B-201ENST00000309241 GIPC1O14908 333 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms