RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 ZSCAN16Q9H4T2 348 aaPredicted RBP26.2■■□□□ 1.78
PDLIM2-202ENST00000308354 MKRN1Q9UHC7 482 aaKnown RBP26.2■■□□□ 1.78
PDLIM2-202ENST00000308354 UBE2Q2LH0YL09 131 aa26.19■■□□□ 1.78
PDLIM2-202ENST00000308354 FGRP09769 529 aa26.19■■□□□ 1.78
PDLIM2-202ENST00000308354 FAM47AQ5JRC9 791 aa26.19■■□□□ 1.78
PDLIM2-202ENST00000308354 MYH2Q9UKX2 1941 aa26.19■■□□□ 1.78
PDLIM2-202ENST00000308354 PPP4CP60510 307 aa26.19■■□□□ 1.78
PDLIM2-202ENST00000308354 CEBPZQ03701 1054 aaKnown RBP26.19■■□□□ 1.78
PDLIM2-202ENST00000308354 CCDC173Q0VFZ6 552 aa26.19■■□□□ 1.78
PDLIM2-202ENST00000308354 SEC23AQ15436 765 aa26.19■■□□□ 1.78
PDLIM2-202ENST00000308354 NTRK3Q16288 839 aa26.19■■□□□ 1.78
PDLIM2-202ENST00000308354 MAPKAPK5Q8IW41 473 aa26.19■■□□□ 1.78
PDLIM2-202ENST00000308354 TBC1D22AQ8WUA7 517 aa26.19■■□□□ 1.78
PDLIM2-202ENST00000308354 NUP133Q8WUM0 1156 aa26.19■■□□□ 1.78
PDLIM2-202ENST00000308354 ZSCAN10Q96SZ4 725 aaPredicted RBP26.19■■□□□ 1.78
PDLIM2-202ENST00000308354 TSPY26PQ9H489 355 aa26.19■■□□□ 1.78
PDLIM2-202ENST00000308354 BAG6P46379 1132 aa26.18■■□□□ 1.78
PDLIM2-202ENST00000308354 SBK1Q52WX2 424 aa26.18■■□□□ 1.78
PDLIM2-202ENST00000308354 CMTR1Q8N1G2 835 aaKnown RBP26.18■■□□□ 1.78
PDLIM2-202ENST00000308354 ENAHQ8N8S7 591 aaPredicted RBP26.18■■□□□ 1.78
PDLIM2-202ENST00000308354 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.18■■□□□ 1.78
PDLIM2-202ENST00000308354 NMT2O60551 498 aa26.18■■□□□ 1.78
PDLIM2-202ENST00000308354 CCDC82Q8N4S0 544 aa26.18■■□□□ 1.78
PDLIM2-202ENST00000308354 RNF214Q8ND24 703 aa26.18■■□□□ 1.78
PDLIM2-202ENST00000308354 DYNLL2Q96FJ2 89 aa26.18■■□□□ 1.78
PDLIM2-202ENST00000308354 SPATA32Q96LK8 384 aa26.18■■□□□ 1.78
PDLIM2-202ENST00000308354 SAP30BPQ9UHR5 308 aaKnown RBP26.18■■□□□ 1.78
PDLIM2-202ENST00000308354 ELP1O95163 1332 aa26.18■■□□□ 1.78
PDLIM2-202ENST00000308354 FAM205AQ6ZU69 1335 aa26.18■■□□□ 1.78
PDLIM2-202ENST00000308354 G3V3G9 751 aa26.17■■□□□ 1.78
PDLIM2-202ENST00000308354 DCAF8Q5TAQ9 597 aa26.17■■□□□ 1.78
PDLIM2-202ENST00000308354 FTOQ9C0B1 505 aaKnown RBP eCLIP26.17■■□□□ 1.78
PDLIM2-202ENST00000308354 MYH15Q9Y2K3 1946 aa26.17■■□□□ 1.78
PDLIM2-202ENST00000308354 CPLX2Q6PUV4 134 aaKnown RBP26.16■■□□□ 1.78
PDLIM2-202ENST00000308354 ZNF654Q8IZM8 581 aa26.16■■□□□ 1.78
PDLIM2-202ENST00000308354 CERS5Q8N5B7 392 aa26.16■■□□□ 1.78
PDLIM2-202ENST00000308354 FBXO18Q8NFZ0 1043 aa26.16■■□□□ 1.78
PDLIM2-202ENST00000308354 PPP1R9BQ96SB3 815 aa26.16■■□□□ 1.78
PDLIM2-202ENST00000308354 DBNDD1Q9H9R9 158 aa26.16■■□□□ 1.78
PDLIM2-202ENST00000308354 GPR75-ASB3A0A0A6YYF3 556 aa26.16■■□□□ 1.78
PDLIM2-202ENST00000308354 CDKL5O76039 1030 aa26.16■■□□□ 1.78
PDLIM2-202ENST00000308354 C12orf60Q5U649 245 aa26.16■■□□□ 1.78
PDLIM2-202ENST00000308354 STYK1Q6J9G0 422 aa26.16■■□□□ 1.78
PDLIM2-202ENST00000308354 ILDR1Q86SU0 546 aaPredicted RBP26.16■■□□□ 1.78
PDLIM2-202ENST00000308354 TMTC2Q8N394 836 aa26.16■■□□□ 1.78
PDLIM2-202ENST00000308354 LEO1Q8WVC0 666 aaPredicted RBP26.16■■□□□ 1.78
PDLIM2-202ENST00000308354 SCAND2PQ9GZW5 306 aaPredicted RBP26.16■■□□□ 1.78
PDLIM2-202ENST00000308354 KCNQ5Q9NR82 932 aa26.16■■□□□ 1.78
PDLIM2-202ENST00000308354 KIAA1551Q9HCM1 1747 aa26.16■■□□□ 1.78
PDLIM2-202ENST00000308354 IGSF3O75054 1194 aa26.15■■□□□ 1.78
PDLIM2-202ENST00000308354 IARSP41252 1262 aaKnown RBP26.15■■□□□ 1.78
PDLIM2-202ENST00000308354 IQCA1Q86XH1 822 aa26.15■■□□□ 1.78
PDLIM2-202ENST00000308354 MTA3Q9BTC8 594 aa26.15■■□□□ 1.78
PDLIM2-202ENST00000308354 RRAGDQ9NQL2 400 aaPredicted RBP26.15■■□□□ 1.78
PDLIM2-202ENST00000308354 SLC3A2P08195 630 aaKnown RBP26.15■■□□□ 1.78
PDLIM2-202ENST00000308354 RTN1Q16799 776 aa26.15■■□□□ 1.78
PDLIM2-202ENST00000308354 ALG1Q9BT22 464 aa26.15■■□□□ 1.78
PDLIM2-202ENST00000308354 SLC26A6Q9BXS9 759 aa26.15■■□□□ 1.78
PDLIM2-202ENST00000308354 SLX4Q8IY92 1834 aa26.14■■□□□ 1.78
PDLIM2-202ENST00000308354 ORC4O43929 436 aa26.14■■□□□ 1.78
PDLIM2-202ENST00000308354 PCP11498 1178 aaKnown RBP26.14■■□□□ 1.78
PDLIM2-202ENST00000308354 PLCD1P51178 756 aa26.14■■□□□ 1.78
PDLIM2-202ENST00000308354 PDE4BQ07343 736 aa26.14■■□□□ 1.78
PDLIM2-202ENST00000308354 IFIT1BQ5T764 474 aaKnown RBP26.14■■□□□ 1.78
PDLIM2-202ENST00000308354 TEX11Q8IYF3 940 aa26.14■■□□□ 1.78
PDLIM2-202ENST00000308354 TRIM44Q96DX7 344 aaPredicted RBP26.14■■□□□ 1.77
PDLIM2-202ENST00000308354 FANCBQ8NB91 859 aa26.13■■□□□ 1.77
PDLIM2-202ENST00000308354 POLR3DP05423 398 aaPredicted RBP26.12■■□□□ 1.77
PDLIM2-202ENST00000308354 RHBDL3P58872 404 aa26.12■■□□□ 1.77
PDLIM2-202ENST00000308354 DAGLAQ9Y4D2 1042 aa26.12■■□□□ 1.77
PDLIM2-202ENST00000308354 LAMB1P07942 1786 aa26.12■■□□□ 1.77
PDLIM2-202ENST00000308354 TSPY2A6NKD2 308 aa26.12■■□□□ 1.77
PDLIM2-202ENST00000308354 SLC44A5Q8NCS7 719 aa26.12■■□□□ 1.77
PDLIM2-202ENST00000308354 EYA3Q99504 573 aa26.12■■□□□ 1.77
PDLIM2-202ENST00000308354 GUCY1A2P33402 732 aa26.11■■□□□ 1.77
PDLIM2-202ENST00000308354 SCNN1DP51172 638 aa26.11■■□□□ 1.77
PDLIM2-202ENST00000308354 FAM163AQ96GL9 167 aaPredicted RBP26.11■■□□□ 1.77
PDLIM2-202ENST00000308354 USP28Q96RU2 1077 aa26.11■■□□□ 1.77
PDLIM2-202ENST00000308354 TTF2Q9UNY4 1162 aaKnown RBP26.11■■□□□ 1.77
PDLIM2-202ENST00000308354 GAKO14976 1311 aa26.11■■□□□ 1.77
PDLIM2-202ENST00000308354 KIF28PB7ZC32 967 aa26.11■■□□□ 1.77
PDLIM2-202ENST00000308354 LETM1O95202 739 aaPredicted RBP26.11■■□□□ 1.77
PDLIM2-202ENST00000308354 SSRP1Q08945 709 aaKnown RBP26.11■■□□□ 1.77
PDLIM2-202ENST00000308354 SLF2Q8IX21 1173 aa26.11■■□□□ 1.77
PDLIM2-202ENST00000308354 CNKSR1Q969H4 720 aa26.11■■□□□ 1.77
PDLIM2-202ENST00000308354 IFNAR1P17181 557 aa26.1■■□□□ 1.77
PDLIM2-202ENST00000308354 CFAP45Q9UL16 551 aa26.1■■□□□ 1.77
PDLIM2-202ENST00000308354 LIG1P18858 919 aa26.1■■□□□ 1.77
PDLIM2-202ENST00000308354 AMOTL1Q8IY63 956 aa26.1■■□□□ 1.77
PDLIM2-202ENST00000308354 FLT1P17948 1338 aa26.09■■□□□ 1.77
PDLIM2-202ENST00000308354 FMNL1O95466 1100 aaPredicted RBP26.09■■□□□ 1.77
PDLIM2-202ENST00000308354 TFAP4Q01664 338 aa26.09■■□□□ 1.77
PDLIM2-202ENST00000308354 KRT40Q6A162 431 aa26.09■■□□□ 1.77
PDLIM2-202ENST00000308354 PGBD1Q96JS3 809 aa26.09■■□□□ 1.77
PDLIM2-202ENST00000308354 MKNK2Q9HBH9 465 aa26.09■■□□□ 1.77
PDLIM2-202ENST00000308354 NID2Q14112 1375 aa26.09■■□□□ 1.77
PDLIM2-202ENST00000308354 GOLGA6L4A6NEF3 574 aa26.08■■□□□ 1.77
PDLIM2-202ENST00000308354 CATIPQ7Z7H3 387 aa26.08■■□□□ 1.77
PDLIM2-202ENST00000308354 NBPF11Q86T75 865 aa26.08■■□□□ 1.77
PDLIM2-202ENST00000308354 C7orf43Q8WVR3 580 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms