RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 TGFBRAP1Q8WUH2 860 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 INTS4Q96HW7 963 aaKnown RBP8.22□□□□□ -1.09
PTCD2-201ENST00000308077 NOL10Q9BSC4 688 aaKnown RBP8.22□□□□□ -1.09
PTCD2-201ENST00000308077 SH2B1Q9NRF2 756 aaPredicted RBP8.22□□□□□ -1.09
PTCD2-201ENST00000308077 RAPGEFL1Q9UHV5 662 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 WDR19Q8NEZ3 1342 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 USP17L8P0C7I0 530 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 IARSP41252 1262 aaKnown RBP8.22□□□□□ -1.09
PTCD2-201ENST00000308077 APOBRQ0VD83 1088 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 TRDNQ13061 729 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 SBK1Q52WX2 424 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 MFSD6Q6ZSS7 791 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 KIAA0825Q8IV33 1275 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 CIZ1Q9ULV3 898 aaPredicted RBP8.22□□□□□ -1.09
PTCD2-201ENST00000308077 BCS1LQ9Y276 419 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 PCDHAC2Q9Y5I4 1007 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 KDM4AO75164 1064 aa8.21□□□□□ -1.09
PTCD2-201ENST00000308077 USP5P45974 858 aa8.21□□□□□ -1.09
PTCD2-201ENST00000308077 STK3Q13188 491 aa8.21□□□□□ -1.09
PTCD2-201ENST00000308077 PKP1Q13835 747 aa8.21□□□□□ -1.09
PTCD2-201ENST00000308077 SLC4A8Q2Y0W8 1093 aa8.21□□□□□ -1.09
PTCD2-201ENST00000308077 HHIPL2Q6UWX4 724 aa8.21□□□□□ -1.09
PTCD2-201ENST00000308077 CERS3Q8IU89 383 aa8.21□□□□□ -1.09
PTCD2-201ENST00000308077 MAPKAPK5Q8IW41 473 aa8.21□□□□□ -1.09
PTCD2-201ENST00000308077 TEX11Q8IYF3 940 aa8.21□□□□□ -1.09
PTCD2-201ENST00000308077 VPS33BQ9H267 617 aa8.21□□□□□ -1.09
PTCD2-201ENST00000308077 CWC22Q9HCG8 908 aaKnown RBP8.21□□□□□ -1.09
PTCD2-201ENST00000308077 MCM9Q9NXL9 1143 aa8.21□□□□□ -1.09
PTCD2-201ENST00000308077 ARPP21Q9UBL0 812 aaPredicted RBP8.21□□□□□ -1.09
PTCD2-201ENST00000308077 UNC79Q9P2D8 2635 aa8.21□□□□□ -1.1
PTCD2-201ENST00000308077 FLT1P17948 1338 aa8.21□□□□□ -1.1
PTCD2-201ENST00000308077 PSMD14O00487 310 aa8.21□□□□□ -1.1
PTCD2-201ENST00000308077 SH2B2O14492 632 aaPredicted RBP8.21□□□□□ -1.1
PTCD2-201ENST00000308077 RAD17O75943 681 aa8.21□□□□□ -1.1
PTCD2-201ENST00000308077 FGRP09769 529 aa8.21□□□□□ -1.1
PTCD2-201ENST00000308077 PLCG2P16885 1265 aa8.21□□□□□ -1.1
PTCD2-201ENST00000308077 CRKP46108 304 aa8.21□□□□□ -1.1
PTCD2-201ENST00000308077 FGD1P98174 961 aa8.21□□□□□ -1.1
PTCD2-201ENST00000308077 RRP12Q5JTH9 1297 aaKnown RBP8.21□□□□□ -1.1
PTCD2-201ENST00000308077 APOBEC3HQ6NTF7 200 aaKnown RBP8.21□□□□□ -1.1
PTCD2-201ENST00000308077 TEKT1Q969V4 418 aa8.21□□□□□ -1.1
PTCD2-201ENST00000308077 KRT23Q9C075 422 aa8.21□□□□□ -1.1
PTCD2-201ENST00000308077 TAOK3Q9H2K8 898 aa8.21□□□□□ -1.1
PTCD2-201ENST00000308077 CNNM2Q9H8M5 875 aa8.21□□□□□ -1.1
PTCD2-201ENST00000308077 SENP2Q9HC62 589 aa8.21□□□□□ -1.1
PTCD2-201ENST00000308077 ZSWIM5Q9P217 1185 aa8.21□□□□□ -1.1
PTCD2-201ENST00000308077 BRPF3Q9ULD4 1205 aa8.21□□□□□ -1.1
PTCD2-201ENST00000308077 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.21□□□□□ -1.1
PTCD2-201ENST00000308077 ROBO3Q96MS0 1386 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 PRDM1O75626 825 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 WDHD1O75717 1129 aaPredicted RBP8.2□□□□□ -1.1
PTCD2-201ENST00000308077 VIL1P09327 827 aaKnown RBP8.2□□□□□ -1.1
PTCD2-201ENST00000308077 EVCP57679 992 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 RASSF7Q02833 373 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 RAB3GAP1Q15042 981 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 C12orf60Q5U649 245 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 IGDCC4Q8TDY8 1250 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 GTF3C6Q969F1 213 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 ZDHHC15Q96MV8 337 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 MRIQ9BWK5 157 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 RNF41Q9H4P4 317 aaPredicted RBP8.2□□□□□ -1.1
PTCD2-201ENST00000308077 DDX4Q9NQI0 724 aaKnown RBP8.2□□□□□ -1.1
PTCD2-201ENST00000308077 TOMM22Q9NS69 142 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 SAP30BPQ9UHR5 308 aaKnown RBP8.2□□□□□ -1.1
PTCD2-201ENST00000308077 LTBP3Q9NS15 1303 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 PFKFB2O60825 505 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 PDIA3P30101 505 aaKnown RBP8.2□□□□□ -1.1
PTCD2-201ENST00000308077 PLCD1P51178 756 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 HDLBPQ00341 1268 aaKnown RBP8.2□□□□□ -1.1
PTCD2-201ENST00000308077 SCRN1Q12765 414 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 CDC42EP5Q6NZY7 148 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 RSBN1LQ6PCB5 846 aaPredicted RBP8.2□□□□□ -1.1
PTCD2-201ENST00000308077 NIM1KQ8IY84 436 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 DYNLL2Q96FJ2 89 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 GMLQ99445 158 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 LY9Q9HBG7 655 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 ZNRF3Q9ULT6 936 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 ZDHHC9Q9Y397 364 aa8.2□□□□□ -1.1
PTCD2-201ENST00000308077 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.2□□□□□ -1.1
PTCD2-201ENST00000308077 SIPA1L1O43166 1804 aa8.19□□□□□ -1.1
PTCD2-201ENST00000308077 KLF18A0A0U1RQI7 1052 aa8.19□□□□□ -1.1
PTCD2-201ENST00000308077 ORC4O43929 436 aa8.19□□□□□ -1.1
PTCD2-201ENST00000308077 RGS20O76081 388 aa8.19□□□□□ -1.1
PTCD2-201ENST00000308077 MYCNP04198 464 aaPredicted RBP8.19□□□□□ -1.1
PTCD2-201ENST00000308077 ZNF274Q96GC6 653 aaPredicted RBP8.19□□□□□ -1.1
PTCD2-201ENST00000308077 TMEM87BQ96K49 555 aa8.19□□□□□ -1.1
PTCD2-201ENST00000308077 ZKSCAN3Q9BRR0 538 aa8.19□□□□□ -1.1
PTCD2-201ENST00000308077 USP40Q9NVE5 1235 aa8.19□□□□□ -1.1
PTCD2-201ENST00000308077 SERPINA10Q9UK55 444 aa8.19□□□□□ -1.1
PTCD2-201ENST00000308077 ANGEL1Q9UNK9 670 aaKnown RBP8.19□□□□□ -1.1
PTCD2-201ENST00000308077 HPS5Q9UPZ3 1129 aa8.19□□□□□ -1.1
PTCD2-201ENST00000308077 COLQQ9Y215 455 aaPredicted RBP8.19□□□□□ -1.1
PTCD2-201ENST00000308077 ZBTB12Q9Y330 459 aaPredicted RBP8.19□□□□□ -1.1
PTCD2-201ENST00000308077 GJB2P29033 226 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 CCT2P78371 535 aaKnown RBP8.18□□□□□ -1.1
PTCD2-201ENST00000308077 CXCL9Q07325 125 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 NFIAQ12857 509 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 PICALMQ13492 652 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 NFKBIBQ15653 356 aa8.18□□□□□ -1.1
PTCD2-201ENST00000308077 TMEM67Q5HYA8 995 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms