RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 FHDC1Q9C0D6 1143 aaPredicted RBP20.59■□□□□ 0.89
KRT28-201ENST00000306658 FOCADQ5VW36 1801 aa20.59■□□□□ 0.89
KRT28-201ENST00000306658 DHX16O60231 1041 aaKnown RBP20.58■□□□□ 0.89
KRT28-201ENST00000306658 PRDM1O75626 825 aa20.58■□□□□ 0.89
KRT28-201ENST00000306658 PICALMQ13492 652 aa20.58■□□□□ 0.89
KRT28-201ENST00000306658 TNIP1Q15025 636 aa20.58■□□□□ 0.89
KRT28-201ENST00000306658 CIAPIN1Q6FI81 312 aa20.58■□□□□ 0.89
KRT28-201ENST00000306658 NFXL1Q6ZNB6 911 aa20.58■□□□□ 0.89
KRT28-201ENST00000306658 TTC6Q86TZ1 520 aa20.58■□□□□ 0.89
KRT28-201ENST00000306658 SGMS1Q86VZ5 419 aa20.58■□□□□ 0.89
KRT28-201ENST00000306658 GMLQ99445 158 aa20.58■□□□□ 0.89
KRT28-201ENST00000306658 LY9Q9HBG7 655 aa20.58■□□□□ 0.89
KRT28-201ENST00000306658 BRPF3Q9ULD4 1205 aa20.58■□□□□ 0.89
KRT28-201ENST00000306658 MYH1P12882 1939 aa20.58■□□□□ 0.89
KRT28-201ENST00000306658 PDIA4P13667 645 aaKnown RBP20.58■□□□□ 0.88
KRT28-201ENST00000306658 GJB2P29033 226 aa20.58■□□□□ 0.88
KRT28-201ENST00000306658 PLCD1P51178 756 aa20.58■□□□□ 0.88
KRT28-201ENST00000306658 CXCL9Q07325 125 aa20.58■□□□□ 0.88
KRT28-201ENST00000306658 WTAPQ15007 396 aa20.58■□□□□ 0.88
KRT28-201ENST00000306658 SLC4A8Q2Y0W8 1093 aa20.58■□□□□ 0.88
KRT28-201ENST00000306658 MKNK2Q9HBH9 465 aa20.58■□□□□ 0.88
KRT28-201ENST00000306658 CCDC69A6NI79 296 aa20.57■□□□□ 0.88
KRT28-201ENST00000306658 GOLGA8BA8MQT2 603 aa20.57■□□□□ 0.88
KRT28-201ENST00000306658 CCT2P78371 535 aaKnown RBP20.57■□□□□ 0.88
KRT28-201ENST00000306658 EVX2Q03828 476 aa20.57■□□□□ 0.88
KRT28-201ENST00000306658 CFAP100Q494V2 611 aa20.57■□□□□ 0.88
KRT28-201ENST00000306658 SYNE3Q6ZMZ3 975 aa20.57■□□□□ 0.88
KRT28-201ENST00000306658 ZKSCAN3Q9BRR0 538 aa20.57■□□□□ 0.88
KRT28-201ENST00000306658 ZSCAN10Q96SZ4 725 aaPredicted RBP20.56■□□□□ 0.88
KRT28-201ENST00000306658 SLC12A7Q9Y666 1083 aa20.56■□□□□ 0.88
KRT28-201ENST00000306658 ADAMTSL1Q8N6G6 1762 aa20.56■□□□□ 0.88
KRT28-201ENST00000306658 TSPY2A6NKD2 308 aa20.55■□□□□ 0.88
KRT28-201ENST00000306658 MMP14P50281 582 aa20.55■□□□□ 0.88
KRT28-201ENST00000306658 APOA5Q6Q788 366 aa20.55■□□□□ 0.88
KRT28-201ENST00000306658 ZNF444Q8N0Y2 327 aaPredicted RBP20.55■□□□□ 0.88
KRT28-201ENST00000306658 TNPO1Q92973 898 aaKnown RBP20.55■□□□□ 0.88
KRT28-201ENST00000306658 DYNLL2Q96FJ2 89 aa20.55■□□□□ 0.88
KRT28-201ENST00000306658 IDI2Q9BXS1 227 aa20.55■□□□□ 0.88
KRT28-201ENST00000306658 OSBPL5Q9H0X9 879 aaPredicted RBP20.55■□□□□ 0.88
KRT28-201ENST00000306658 DDX4Q9NQI0 724 aaKnown RBP20.55■□□□□ 0.88
KRT28-201ENST00000306658 ZBTB12Q9Y330 459 aaPredicted RBP20.55■□□□□ 0.88
KRT28-201ENST00000306658 ECM29Q5VYK3 1845 aa20.55■□□□□ 0.88
KRT28-201ENST00000306658 DDX60LQ5H9U9 1706 aaKnown RBP20.55■□□□□ 0.88
KRT28-201ENST00000306658 TNKSO95271 1327 aa20.55■□□□□ 0.88
KRT28-201ENST00000306658 NPM3O75607 178 aaKnown RBP20.54■□□□□ 0.88
KRT28-201ENST00000306658 PDCP20941 246 aa20.54■□□□□ 0.88
KRT28-201ENST00000306658 RASSF7Q02833 373 aa20.54■□□□□ 0.88
KRT28-201ENST00000306658 C16orf86Q6ZW13 317 aa20.54■□□□□ 0.88
KRT28-201ENST00000306658 HPS5Q9UPZ3 1129 aa20.54■□□□□ 0.88
KRT28-201ENST00000306658 ZBTB43O43298 467 aa20.54■□□□□ 0.88
KRT28-201ENST00000306658 HMGN5P82970 282 aaKnown RBP20.54■□□□□ 0.88
KRT28-201ENST00000306658 PKP1Q13835 747 aa20.54■□□□□ 0.88
KRT28-201ENST00000306658 DLGAP5Q15398 846 aa20.54■□□□□ 0.88
KRT28-201ENST00000306658 NFKBIBQ15653 356 aa20.54■□□□□ 0.88
KRT28-201ENST00000306658 CCDC178Q5BJE1 867 aa20.54■□□□□ 0.88
KRT28-201ENST00000306658 PCDHAC2Q9Y5I4 1007 aa20.54■□□□□ 0.88
KRT28-201ENST00000306658 WDR33Q9C0J8 1336 aaKnown RBP20.53■□□□□ 0.88
KRT28-201ENST00000306658 HLA-DOAP06340 250 aa20.53■□□□□ 0.88
KRT28-201ENST00000306658 CDK8P49336 464 aa20.53■□□□□ 0.88
KRT28-201ENST00000306658 METAP2P50579 478 aaKnown RBP eCLIP20.53■□□□□ 0.88
KRT28-201ENST00000306658 EIF6P56537 245 aaKnown RBP20.53■□□□□ 0.88
KRT28-201ENST00000306658 SEC23AQ15436 765 aa20.53■□□□□ 0.88
KRT28-201ENST00000306658 FAM47AQ5JRC9 791 aa20.53■□□□□ 0.88
KRT28-201ENST00000306658 PRMT6Q96LA8 375 aaPredicted RBP20.53■□□□□ 0.88
KRT28-201ENST00000306658 SYT17Q9BSW7 474 aa20.53■□□□□ 0.88
KRT28-201ENST00000306658 DHX36Q9H2U1 1008 aaKnown RBP20.53■□□□□ 0.88
KRT28-201ENST00000306658 SENP2Q9HC62 589 aa20.53■□□□□ 0.88
KRT28-201ENST00000306658 NCOA5Q9HCD5 579 aaKnown RBP20.53■□□□□ 0.88
KRT28-201ENST00000306658 KIF3AQ9Y496 699 aa20.53■□□□□ 0.88
KRT28-201ENST00000306658 SPDYE2BA6NHP3 402 aa20.52■□□□□ 0.88
KRT28-201ENST00000306658 CPLX1O14810 134 aa20.52■□□□□ 0.88
KRT28-201ENST00000306658 BRD1O95696 1058 aa20.52■□□□□ 0.88
KRT28-201ENST00000306658 SPDYE6P0CI01 402 aa20.52■□□□□ 0.88
KRT28-201ENST00000306658 SYT1P21579 422 aa20.52■□□□□ 0.88
KRT28-201ENST00000306658 RPS12P25398 132 aaKnown RBP20.52■□□□□ 0.88
KRT28-201ENST00000306658 RCAN1P53805 252 aa20.52■□□□□ 0.88
KRT28-201ENST00000306658 TFAP4Q01664 338 aa20.52■□□□□ 0.88
KRT28-201ENST00000306658 NFIAQ12857 509 aa20.52■□□□□ 0.88
KRT28-201ENST00000306658 IFIT1BQ5T764 474 aaKnown RBP20.52■□□□□ 0.88
KRT28-201ENST00000306658 ARHGAP27Q6ZUM4 889 aa20.52■□□□□ 0.88
KRT28-201ENST00000306658 ENAHQ8N8S7 591 aaPredicted RBP20.52■□□□□ 0.88
KRT28-201ENST00000306658 NSUN7Q8NE18 718 aaKnown RBP20.52■□□□□ 0.88
KRT28-201ENST00000306658 SMARCC2Q8TAQ2 1214 aa20.52■□□□□ 0.88
KRT28-201ENST00000306658 GBP4Q96PP9 640 aa20.52■□□□□ 0.88
KRT28-201ENST00000306658 TDRD3Q9H7E2 651 aaKnown RBP20.52■□□□□ 0.88
KRT28-201ENST00000306658 TMOD2Q9NZR1 351 aa20.52■□□□□ 0.88
KRT28-201ENST00000306658 FZD9O00144 591 aa20.51■□□□□ 0.87
KRT28-201ENST00000306658 STX6O43752 255 aa20.51■□□□□ 0.87
KRT28-201ENST00000306658 TSPY3P0CV98 308 aa20.51■□□□□ 0.87
KRT28-201ENST00000306658 TSPY8P0CW00 308 aa20.51■□□□□ 0.87
KRT28-201ENST00000306658 LARP1BQ659C4 914 aaKnown RBP20.51■□□□□ 0.87
KRT28-201ENST00000306658 MTMR14Q8NCE2 650 aa20.51■□□□□ 0.87
KRT28-201ENST00000306658 ZDHHC9Q9Y397 364 aa20.51■□□□□ 0.87
KRT28-201ENST00000306658 CPLX2Q6PUV4 134 aaKnown RBP20.51■□□□□ 0.87
KRT28-201ENST00000306658 MICU3Q86XE3 530 aa20.51■□□□□ 0.87
KRT28-201ENST00000306658 FAM184AQ8NB25 1140 aa20.51■□□□□ 0.87
KRT28-201ENST00000306658 SWAP70Q9UH65 585 aa20.51■□□□□ 0.87
KRT28-201ENST00000306658 SERPINB13Q9UIV8 391 aa20.51■□□□□ 0.87
KRT28-201ENST00000306658 PTPDC1A2A3K4 754 aa20.5■□□□□ 0.87
KRT28-201ENST00000306658 GOLGA8AA7E2F4 631 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms