RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 MAP4K4O95819 1239 aaPredicted RBP25.17■■□□□ 1.62
RER1-201ENST00000306256 CCDC158Q5M9N0 1113 aa25.17■■□□□ 1.62
RER1-201ENST00000306256 NAA16Q6N069 864 aaPredicted RBP25.17■■□□□ 1.62
RER1-201ENST00000306256 LOC285556D6RIA3 1793 aa25.17■■□□□ 1.62
RER1-201ENST00000306256 NOL10Q9BSC4 688 aaKnown RBP25.16■■□□□ 1.62
RER1-201ENST00000306256 AATFQ9NY61 560 aaKnown RBP eCLIP25.16■■□□□ 1.629e-8■□□□□ 9.1
RER1-201ENST00000306256 TLR7Q9NYK1 1049 aaKnown RBP25.16■■□□□ 1.62
RER1-201ENST00000306256 MYPNQ86TC9 1320 aa25.15■■□□□ 1.62
RER1-201ENST00000306256 CYP2E1P05181 493 aaPredicted RBP25.15■■□□□ 1.62
RER1-201ENST00000306256 ADGRA1Q86SQ6 560 aa25.15■■□□□ 1.62
RER1-201ENST00000306256 RAET1EQ8TD07 263 aa25.15■■□□□ 1.62
RER1-201ENST00000306256 DBNLQ9UJU6 430 aaKnown RBP25.15■■□□□ 1.62
RER1-201ENST00000306256 NOP58Q9Y2X3 529 aaKnown RBP25.15■■□□□ 1.62
RER1-201ENST00000306256 MYH1P12882 1939 aa25.14■■□□□ 1.62
RER1-201ENST00000306256 HOXD10P28358 340 aa25.14■■□□□ 1.62
RER1-201ENST00000306256 ZAP70P43403 619 aa25.14■■□□□ 1.62
RER1-201ENST00000306256 RRP1BQ14684 758 aaKnown RBP25.14■■□□□ 1.62
RER1-201ENST00000306256 CCDC8Q9H0W5 538 aaPredicted RBP25.14■■□□□ 1.62
RER1-201ENST00000306256 FCGRTP55899 365 aa25.13■■□□□ 1.61
RER1-201ENST00000306256 MTFR1Q15390 333 aa25.13■■□□□ 1.61
RER1-201ENST00000306256 PANK1Q8TE04 598 aa25.13■■□□□ 1.61
RER1-201ENST00000306256 PIH1D3Q9NQM4 214 aaKnown RBP25.13■■□□□ 1.61
RER1-201ENST00000306256 SLC45A1Q9Y2W3 748 aa25.13■■□□□ 1.61
RER1-201ENST00000306256 ZBED9Q6R2W3 1325 aa25.12■■□□□ 1.61
RER1-201ENST00000306256 PRKCZQ05513 592 aa25.12■■□□□ 1.61
RER1-201ENST00000306256 TREML2Q5T2D2 321 aa25.12■■□□□ 1.61
RER1-201ENST00000306256 CEP85Q6P2H3 762 aa25.12■■□□□ 1.61
RER1-201ENST00000306256 MAPKAPK5Q8IW41 473 aa25.12■■□□□ 1.61
RER1-201ENST00000306256 SMCR8Q8TEV9 937 aaPredicted RBP25.12■■□□□ 1.61
RER1-201ENST00000306256 EAF2Q96CJ1 260 aaPredicted RBP25.12■■□□□ 1.61
RER1-201ENST00000306256 AGTPBP1Q9UPW5 1226 aa25.12■■□□□ 1.61
RER1-201ENST00000306256 CEP290O15078 2479 aa25.12■■□□□ 1.61
RER1-201ENST00000306256 BAG3O95817 575 aa25.11■■□□□ 1.61
RER1-201ENST00000306256 GRK4P32298 578 aa25.11■■□□□ 1.61
RER1-201ENST00000306256 SPP2Q13103 211 aa25.11■■□□□ 1.61
RER1-201ENST00000306256 TGFBRAP1Q8WUH2 860 aa25.11■■□□□ 1.61
RER1-201ENST00000306256 ZNF512BQ96KM6 892 aaPredicted RBP25.11■■□□□ 1.61
RER1-201ENST00000306256 GABRQQ9UN88 632 aa25.11■■□□□ 1.61
RER1-201ENST00000306256 PLCG2P16885 1265 aa25.1■■□□□ 1.61
RER1-201ENST00000306256 CAP2P40123 477 aa25.1■■□□□ 1.61
RER1-201ENST00000306256 FLT1P17948 1338 aa25.1■■□□□ 1.61
RER1-201ENST00000306256 PPP4CP60510 307 aa25.09■■□□□ 1.61
RER1-201ENST00000306256 ZNF280CQ8ND82 737 aa25.09■■□□□ 1.61
RER1-201ENST00000306256 PI4KBQ9UBF8 816 aa25.09■■□□□ 1.61
RER1-201ENST00000306256 HERC5Q9UII4 1024 aaKnown RBP25.09■■□□□ 1.61
RER1-201ENST00000306256 EXOC6BQ9Y2D4 811 aa25.09■■□□□ 1.61
RER1-201ENST00000306256 NDUFB9Q9Y6M9 179 aa25.09■■□□□ 1.61
RER1-201ENST00000306256 HMGCS2P54868 508 aa25.08■■□□□ 1.61
RER1-201ENST00000306256 ANKRD13CQ8N6S4 541 aa25.08■■□□□ 1.61
RER1-201ENST00000306256 SHISA4Q96DD7 197 aa25.08■■□□□ 1.61
RER1-201ENST00000306256 BIN2Q9UBW5 565 aaPredicted RBP25.08■■□□□ 1.61
RER1-201ENST00000306256 IDH1O75874 414 aaKnown RBP25.07■■□□□ 1.6
RER1-201ENST00000306256 DYNLL1P63167 89 aaKnown RBP25.07■■□□□ 1.6
RER1-201ENST00000306256 DHX36Q9H2U1 1008 aaKnown RBP25.07■■□□□ 1.6
RER1-201ENST00000306256 DNAJC18Q9H819 358 aa25.07■■□□□ 1.6
RER1-201ENST00000306256 SAP30BPQ9UHR5 308 aaKnown RBP25.07■■□□□ 1.6
RER1-201ENST00000306256 PALD1Q9ULE6 856 aa25.07■■□□□ 1.6
RER1-201ENST00000306256 USP17L5A8MUK1 530 aa25.06■■□□□ 1.6
RER1-201ENST00000306256 CYP7A1P22680 504 aa25.06■■□□□ 1.6
RER1-201ENST00000306256 SHROOM1Q2M3G4 852 aaPredicted RBP25.06■■□□□ 1.6
RER1-201ENST00000306256 PROCA1Q8NCQ7 364 aaPredicted RBP25.06■■□□□ 1.6
RER1-201ENST00000306256 PNMA3Q9UL41 463 aa25.06■■□□□ 1.6
RER1-201ENST00000306256 TNPO2O14787 897 aaKnown RBP25.05■■□□□ 1.6
RER1-201ENST00000306256 CCL5P13501 91 aa25.05■■□□□ 1.6
RER1-201ENST00000306256 FLT3LGP49771 235 aa25.05■■□□□ 1.6
RER1-201ENST00000306256 JAG1P78504 1218 aa25.05■■□□□ 1.6
RER1-201ENST00000306256 AACSQ86V21 672 aa25.05■■□□□ 1.6
RER1-201ENST00000306256 CRACR2BQ8N4Y2 399 aaPredicted RBP25.04■■□□□ 1.6
RER1-201ENST00000306256 MIGA1Q8NAN2 632 aa25.04■■□□□ 1.6
RER1-201ENST00000306256 SLAIN1Q8ND83 568 aa25.04■■□□□ 1.6
RER1-201ENST00000306256 TBC1D2Q9BYX2 928 aa25.04■■□□□ 1.6
RER1-201ENST00000306256 ANTXR1Q9H6X2 564 aa25.04■■□□□ 1.6
RER1-201ENST00000306256 AS3MTQ9HBK9 375 aa25.04■■□□□ 1.6
RER1-201ENST00000306256 ADCY3O60266 1144 aa25.03■■□□□ 1.6
RER1-201ENST00000306256 GDF11O95390 407 aa25.03■■□□□ 1.6
RER1-201ENST00000306256 ELNP15502 786 aa25.03■■□□□ 1.6
RER1-201ENST00000306256 MTMR2Q13614 643 aa25.03■■□□□ 1.6
RER1-201ENST00000306256 ERC1Q8IUD2 1116 aa25.03■■□□□ 1.6
RER1-201ENST00000306256 MAGEB6Q8N7X4 407 aa25.03■■□□□ 1.6
RER1-201ENST00000306256 GCC1Q96CN9 775 aa25.03■■□□□ 1.6
RER1-201ENST00000306256 TRIM34Q9BYJ4 488 aa25.03■■□□□ 1.6
RER1-201ENST00000306256 RNF208Q9H0X6 261 aa25.03■■□□□ 1.6
RER1-201ENST00000306256 IL1RAPL2Q9NP60 686 aa25.03■■□□□ 1.6
RER1-201ENST00000306256 UBXN2AP68543 259 aa25.02■■□□□ 1.6
RER1-201ENST00000306256 FAM110CQ1W6H9 321 aa25.02■■□□□ 1.6
RER1-201ENST00000306256 UNC93B1Q9H1C4 597 aa25.02■■□□□ 1.6
RER1-201ENST00000306256 ASCC2Q9H1I8 757 aaPredicted RBP25.02■■□□□ 1.6
RER1-201ENST00000306256 TAOK2Q9UL54 1235 aa25.02■■□□□ 1.6
RER1-201ENST00000306256 NAV1Q8NEY1 1877 aa25.01■■□□□ 1.59
RER1-201ENST00000306256 ASNSP08243 561 aa25.01■■□□□ 1.59
RER1-201ENST00000306256 SH3D19Q5HYK7 790 aa25.01■■□□□ 1.59
RER1-201ENST00000306256 METTL16Q86W50 562 aaKnown RBP25.01■■□□□ 1.59
RER1-201ENST00000306256 FOXP4Q8IVH2 680 aaPredicted RBP25.01■■□□□ 1.59
RER1-201ENST00000306256 IGSF3O75054 1194 aa25■■□□□ 1.59
RER1-201ENST00000306256 HLA-DOAP06340 250 aa25■■□□□ 1.59
RER1-201ENST00000306256 GJB1P08034 283 aa25■■□□□ 1.59
RER1-201ENST00000306256 PABPC4Q13310 644 aaKnown RBP eCLIP25■■□□□ 1.593e-6■□□□□ 8
RER1-201ENST00000306256 WDR18Q9BV38 432 aa25■■□□□ 1.59
RER1-201ENST00000306256 ZBTB21Q9ULJ3 1066 aa25■■□□□ 1.59
RER1-201ENST00000306256 PLXNB2O15031 1838 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms