RNA–Protein interactions for RNA: ENST00000306049.9

TEFM-201, Transcript of transcription elongation factor, mitochondrial, humanhuman

TSL 2

Gene TEFM, Length 1,262 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEFM-201ENST00000306049 PTPRAP18433 802 aa11.82□□□□□ -0.52
TEFM-201ENST00000306049 PLA2G5P39877 138 aa11.82□□□□□ -0.52
TEFM-201ENST00000306049 FAM122AQ96E09 287 aa11.82□□□□□ -0.52
TEFM-201ENST00000306049 CDX2Q99626 313 aaPredicted RBP11.82□□□□□ -0.52
TEFM-201ENST00000306049 RAPGEFL1Q9UHV5 662 aa11.82□□□□□ -0.52
TEFM-201ENST00000306049 RFX5P48382 616 aaPredicted RBP11.81□□□□□ -0.52
TEFM-201ENST00000306049 RGS3P49796 1198 aa11.81□□□□□ -0.52
TEFM-201ENST00000306049 SMCR8Q8TEV9 937 aaPredicted RBP11.81□□□□□ -0.52
TEFM-201ENST00000306049 USP44Q9H0E7 712 aa11.81□□□□□ -0.52
TEFM-201ENST00000306049 HMX1Q9NP08 348 aaPredicted RBP11.81□□□□□ -0.52
TEFM-201ENST00000306049 LRRFIP2Q9Y608 721 aaKnown RBP11.81□□□□□ -0.52
TEFM-201ENST00000306049 DNAH12Q6ZR08 3092 aa11.81□□□□□ -0.52
TEFM-201ENST00000306049 SALL1Q9NSC2 1324 aa11.81□□□□□ -0.52
TEFM-201ENST00000306049 MUC3AQ02505 3323 aa11.81□□□□□ -0.52
TEFM-201ENST00000306049 RFX7Q2KHR2 1363 aa11.8□□□□□ -0.52
TEFM-201ENST00000306049 TNFRSF10AO00220 468 aa11.8□□□□□ -0.52
TEFM-201ENST00000306049 ENTPD3O75355 529 aa11.8□□□□□ -0.52
TEFM-201ENST00000306049 SLURP2P0DP57 97 aa11.8□□□□□ -0.52
TEFM-201ENST00000306049 ATP2B3Q16720 1220 aa11.8□□□□□ -0.52
TEFM-201ENST00000306049 SH3BP5LQ7L8J4 393 aa11.8□□□□□ -0.52
TEFM-201ENST00000306049 ATG9AQ7Z3C6 839 aa11.8□□□□□ -0.52
TEFM-201ENST00000306049 ZSCAN29Q8IWY8 852 aaPredicted RBP11.8□□□□□ -0.52
TEFM-201ENST00000306049 MRPL50Q8N5N7 158 aaKnown RBP11.8□□□□□ -0.52
TEFM-201ENST00000306049 IDI2Q9BXS1 227 aa11.8□□□□□ -0.52
TEFM-201ENST00000306049 GNL3LQ9NVN8 582 aaKnown RBP11.8□□□□□ -0.52
TEFM-201ENST00000306049 FRMPD3Q5JV73 1810 aa11.8□□□□□ -0.52
TEFM-201ENST00000306049 CDK5RAP2Q96SN8 1893 aa11.8□□□□□ -0.52
TEFM-201ENST00000306049 DDTLA6NHG4 134 aaPredicted RBP11.79□□□□□ -0.52
TEFM-201ENST00000306049 TRIM75PA6NK02 468 aa11.79□□□□□ -0.52
TEFM-201ENST00000306049 CTNND1O60716 968 aaKnown RBP11.79□□□□□ -0.52
TEFM-201ENST00000306049 HMGCRP04035 888 aa11.79□□□□□ -0.52
TEFM-201ENST00000306049 PHKA1P46020 1223 aa11.79□□□□□ -0.52
TEFM-201ENST00000306049 MAP3K10Q02779 954 aa11.79□□□□□ -0.52
TEFM-201ENST00000306049 ANKRD13CQ8N6S4 541 aa11.79□□□□□ -0.52
TEFM-201ENST00000306049 LBHD1Q9BQE6 289 aaPredicted RBP11.79□□□□□ -0.52
TEFM-201ENST00000306049 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.79□□□□□ -0.52
TEFM-201ENST00000306049 DENND2AQ9ULE3 1009 aa11.79□□□□□ -0.52
TEFM-201ENST00000306049 AGTPBP1Q9UPW5 1226 aa11.79□□□□□ -0.52
TEFM-201ENST00000306049 GAKO14976 1311 aa11.79□□□□□ -0.52
TEFM-201ENST00000306049 PTPRCP08575 1304 aa11.79□□□□□ -0.52
TEFM-201ENST00000306049 COL2A1P02458 1487 aaPredicted RBP11.78□□□□□ -0.52
TEFM-201ENST00000306049 TMEM265A0A087WTH1 108 aa11.78□□□□□ -0.52
TEFM-201ENST00000306049 SEMA3EO15041 775 aa11.78□□□□□ -0.52
TEFM-201ENST00000306049 FAM110CQ1W6H9 321 aa11.78□□□□□ -0.52
TEFM-201ENST00000306049 CCDC84Q86UT8 332 aaPredicted RBP11.78□□□□□ -0.52
TEFM-201ENST00000306049 SIL1Q9H173 461 aa11.78□□□□□ -0.52
TEFM-201ENST00000306049 SEMA6BQ9H3T3 888 aa11.78□□□□□ -0.52
TEFM-201ENST00000306049 DDX4Q9NQI0 724 aaKnown RBP11.78□□□□□ -0.52
TEFM-201ENST00000306049 PNMA3Q9UL41 463 aa11.78□□□□□ -0.52
TEFM-201ENST00000306049 OGDHLQ9ULD0 1010 aa11.78□□□□□ -0.52
TEFM-201ENST00000306049 PFASO15067 1338 aa11.78□□□□□ -0.52
TEFM-201ENST00000306049 SIPA1L1O43166 1804 aa11.77□□□□□ -0.52
TEFM-201ENST00000306049 CIAO1O76071 339 aa11.77□□□□□ -0.53
TEFM-201ENST00000306049 FOSL2P15408 326 aa11.77□□□□□ -0.53
TEFM-201ENST00000306049 PICALMQ13492 652 aa11.77□□□□□ -0.53
TEFM-201ENST00000306049 TREML2Q5T2D2 321 aa11.77□□□□□ -0.53
TEFM-201ENST00000306049 DZIP1Q86YF9 867 aaKnown RBP11.77□□□□□ -0.53
TEFM-201ENST00000306049 ZGPATQ8N5A5 531 aaKnown RBP11.77□□□□□ -0.53
TEFM-201ENST00000306049 MYLIPQ8WY64 445 aa11.77□□□□□ -0.53
TEFM-201ENST00000306049 CEP126Q9P2H0 1117 aa11.77□□□□□ -0.53
TEFM-201ENST00000306049 FBXO3Q9UK99 471 aa11.77□□□□□ -0.53
TEFM-201ENST00000306049 BTDP43251 543 aa11.76□□□□□ -0.53
TEFM-201ENST00000306049 TRIM32Q13049 653 aa11.76□□□□□ -0.53
TEFM-201ENST00000306049 LRRC26Q2I0M4 334 aa11.76□□□□□ -0.53
TEFM-201ENST00000306049 TJAP1Q5JTD0 557 aa11.76□□□□□ -0.53
TEFM-201ENST00000306049 SLF2Q8IX21 1173 aa11.76□□□□□ -0.53
TEFM-201ENST00000306049 PROCA1Q8NCQ7 364 aaPredicted RBP11.76□□□□□ -0.53
TEFM-201ENST00000306049 ABCF2Q9UG63 623 aa11.76□□□□□ -0.53
TEFM-201ENST00000306049 FOCADQ5VW36 1801 aa11.76□□□□□ -0.53
TEFM-201ENST00000306049 MYO5AQ9Y4I1 1855 aaKnown RBP11.76□□□□□ -0.53
TEFM-201ENST00000306049 FAM196BA6NMK8 535 aa11.75□□□□□ -0.53
TEFM-201ENST00000306049 TBC1D12O60347 775 aa11.75□□□□□ -0.53
TEFM-201ENST00000306049 ADORA1P30542 326 aa11.75□□□□□ -0.53
TEFM-201ENST00000306049 GCLCP48506 637 aaPredicted RBP11.75□□□□□ -0.53
TEFM-201ENST00000306049 RASGRF1Q13972 1273 aa11.75□□□□□ -0.53
TEFM-201ENST00000306049 CCDC102BQ68D86 513 aa11.75□□□□□ -0.53
TEFM-201ENST00000306049 SSH1Q8WYL5 1049 aa11.75□□□□□ -0.53
TEFM-201ENST00000306049 FAM163AQ96GL9 167 aaPredicted RBP11.75□□□□□ -0.53
TEFM-201ENST00000306049 GJD2Q9UKL4 321 aa11.75□□□□□ -0.53
TEFM-201ENST00000306049 MROH7-TTC4A0A0A0MT08 1334 aa11.75□□□□□ -0.53
TEFM-201ENST00000306049 TTC28Q96AY4 2481 aa11.74□□□□□ -0.53
TEFM-201ENST00000306049 IL15P40933 162 aaPredicted RBP11.74□□□□□ -0.53
TEFM-201ENST00000306049 SPP2Q13103 211 aa11.74□□□□□ -0.53
TEFM-201ENST00000306049 ZNF280CQ8ND82 737 aa11.74□□□□□ -0.53
TEFM-201ENST00000306049 OSBPL5Q9H0X9 879 aaPredicted RBP11.74□□□□□ -0.53
TEFM-201ENST00000306049 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.74□□□□□ -0.53
TEFM-201ENST00000306049 PRKAG2Q9UGJ0 569 aa11.74□□□□□ -0.53
TEFM-201ENST00000306049 PA2G4Q9UQ80 394 aaKnown RBP11.74□□□□□ -0.53
TEFM-201ENST00000306049 ZNF521Q96K83 1311 aa11.74□□□□□ -0.53
TEFM-201ENST00000306049 CDH23Q9H251 3354 aa11.74□□□□□ -0.53
TEFM-201ENST00000306049 C19orf67A6NJJ6 358 aa11.73□□□□□ -0.53
TEFM-201ENST00000306049 UBTFL1P0CB47 393 aaPredicted RBP11.73□□□□□ -0.53
TEFM-201ENST00000306049 COL6A1P12109 1028 aa11.73□□□□□ -0.53
TEFM-201ENST00000306049 HMGCS2P54868 508 aa11.73□□□□□ -0.53
TEFM-201ENST00000306049 RHBDL3P58872 404 aa11.73□□□□□ -0.53
TEFM-201ENST00000306049 PABPC4Q13310 644 aaKnown RBP eCLIP11.73□□□□□ -0.53
TEFM-201ENST00000306049 PDS5AQ29RF7 1337 aaKnown RBP11.73□□□□□ -0.53
TEFM-201ENST00000306049 SPTY2D1Q68D10 685 aaPredicted RBP11.73□□□□□ -0.53
TEFM-201ENST00000306049 MAST2Q6P0Q8 1798 aa11.73□□□□□ -0.53
TEFM-201ENST00000306049 FAM9BQ8IZU0 186 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms