RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 TAB2Q9NYJ8 693 aa15.58■□□□□ 0.09
PRKCB-201ENST00000303531 TMEM63CQ9P1W3 806 aa15.58■□□□□ 0.09
PRKCB-201ENST00000303531 KCNJ14Q9UNX9 436 aa15.58■□□□□ 0.09
PRKCB-201ENST00000303531 ZAP70P43403 619 aa15.58■□□□□ 0.08
PRKCB-201ENST00000303531 LONRF3Q496Y0 759 aa15.58■□□□□ 0.08
PRKCB-201ENST00000303531 CNBD1Q8NA66 436 aa15.58■□□□□ 0.08
PRKCB-201ENST00000303531 TXNDC16Q9P2K2 825 aa15.58■□□□□ 0.08
PRKCB-201ENST00000303531 LPIN2Q92539 896 aa15.58■□□□□ 0.08
PRKCB-201ENST00000303531 NAP1L3Q99457 506 aaPredicted RBP15.58■□□□□ 0.08
PRKCB-201ENST00000303531 C10orf67Q8IYJ2 551 aa15.58■□□□□ 0.08
PRKCB-201ENST00000303531 TOM1O60784 492 aa15.58■□□□□ 0.08
PRKCB-201ENST00000303531 SECISBP2LQ93073 1101 aaKnown RBP15.58■□□□□ 0.08
PRKCB-201ENST00000303531 E7EWF7 191 aa15.58■□□□□ 0.08
PRKCB-201ENST00000303531 BRD1O95696 1058 aa15.58■□□□□ 0.08
PRKCB-201ENST00000303531 ME3Q16798 604 aa15.58■□□□□ 0.08
PRKCB-201ENST00000303531 MYRIPQ8NFW9 859 aa15.58■□□□□ 0.08
PRKCB-201ENST00000303531 ZNF532Q9HCE3 1301 aa15.57■□□□□ 0.08
PRKCB-201ENST00000303531 TRAPPC3LQ5T215 181 aa15.57■□□□□ 0.08
PRKCB-201ENST00000303531 FNBP1Q96RU3 617 aa15.57■□□□□ 0.08
PRKCB-201ENST00000303531 NUP58Q9BVL2 599 aa15.57■□□□□ 0.08
PRKCB-201ENST00000303531 ARHGAP6O43182 974 aa15.57■□□□□ 0.08
PRKCB-201ENST00000303531 WDR44Q5JSH3 913 aa15.57■□□□□ 0.08
PRKCB-201ENST00000303531 APBB1IPQ7Z5R6 666 aaPredicted RBP15.57■□□□□ 0.08
PRKCB-201ENST00000303531 KIFAP3Q92845 792 aa15.57■□□□□ 0.08
PRKCB-201ENST00000303531 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.57■□□□□ 0.08
PRKCB-201ENST00000303531 TBX22Q9Y458 520 aa15.57■□□□□ 0.08
PRKCB-201ENST00000303531 CALUO43852 315 aaPredicted RBP15.57■□□□□ 0.08
PRKCB-201ENST00000303531 SETDB1Q15047 1291 aa15.57■□□□□ 0.08
PRKCB-201ENST00000303531 SPATA5Q8NB90 893 aa15.57■□□□□ 0.08
PRKCB-201ENST00000303531 KRBA2Q6ZNG9 492 aa15.57■□□□□ 0.08
PRKCB-201ENST00000303531 NOX5Q96PH1 765 aa15.57■□□□□ 0.08
PRKCB-201ENST00000303531 RNF123Q5XPI4 1314 aa15.57■□□□□ 0.08
PRKCB-201ENST00000303531 CETN3O15182 167 aa15.57■□□□□ 0.08
PRKCB-201ENST00000303531 TMTC1Q8IUR5 882 aa15.57■□□□□ 0.08
PRKCB-201ENST00000303531 UBAP1LF5GYI3 381 aa15.57■□□□□ 0.08
PRKCB-201ENST00000303531 MTX1Q13505 466 aa15.57■□□□□ 0.08
PRKCB-201ENST00000303531 ADAMTS12P58397 1594 aa15.56■□□□□ 0.08
PRKCB-201ENST00000303531 HARSP12081 509 aaKnown RBP15.56■□□□□ 0.08
PRKCB-201ENST00000303531 GSPT1P15170 499 aaKnown RBP15.56■□□□□ 0.08
PRKCB-201ENST00000303531 KRT9P35527 623 aa15.56■□□□□ 0.08
PRKCB-201ENST00000303531 SEC62Q99442 399 aaKnown RBP15.56■□□□□ 0.08
PRKCB-201ENST00000303531 NONOQ15233 471 aaKnown RBP eCLIP15.56■□□□□ 0.081e-6■■□□□ 12.5
PRKCB-201ENST00000303531 BEND3Q5T5X7 828 aa15.56■□□□□ 0.08
PRKCB-201ENST00000303531 MAK16Q9BXY0 300 aaKnown RBP15.56■□□□□ 0.08
PRKCB-201ENST00000303531 SNX29Q8TEQ0 813 aa15.56■□□□□ 0.08
PRKCB-201ENST00000303531 JDP2Q8WYK2 163 aa15.56■□□□□ 0.08
PRKCB-201ENST00000303531 TM6SF1Q9BZW5 370 aa15.56■□□□□ 0.08
PRKCB-201ENST00000303531 SH2D4AQ9H788 454 aa15.56■□□□□ 0.08
PRKCB-201ENST00000303531 NKIRAS1Q9NYS0 192 aa15.56■□□□□ 0.08
PRKCB-201ENST00000303531 LRWD1Q9UFC0 647 aa15.56■□□□□ 0.08
PRKCB-201ENST00000303531 CCDC169A6NNP5 214 aa15.56■□□□□ 0.08
PRKCB-201ENST00000303531 DSCC1Q9BVC3 393 aa15.56■□□□□ 0.08
PRKCB-201ENST00000303531 KIF24Q5T7B8 1368 aa15.56■□□□□ 0.08
PRKCB-201ENST00000303531 IBTKQ9P2D0 1353 aaPredicted RBP15.56■□□□□ 0.08
PRKCB-201ENST00000303531 EIF4A1P60842 406 aaKnown RBP15.56■□□□□ 0.08
PRKCB-201ENST00000303531 TRMT44Q8IYL2 757 aaKnown RBP15.56■□□□□ 0.08
PRKCB-201ENST00000303531 NELFBQ8WX92 580 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 hCG_1642624A0A1W2PR95 340 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 NCAPH2Q6IBW4 605 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 VTI1AQ96AJ9 217 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 ERCC3P19447 782 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 SLC9C1Q4G0N8 1177 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 DYMQ7RTS9 669 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 GPIHBP1Q8IV16 184 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 EDC3Q96F86 508 aaKnown RBP15.55■□□□□ 0.08
PRKCB-201ENST00000303531 ABCC4O15439 1325 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 VIMP08670 466 aaKnown RBP15.55■□□□□ 0.08
PRKCB-201ENST00000303531 ATP5JP18859 108 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 FAM169AQ9Y6X4 670 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 SMTNP53814 917 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 PNOCQ13519 176 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 PPP2R5BQ15173 497 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 PTPRTO14522 1441 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 KIAA0232Q92628 1395 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 ADCY7P51828 1080 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 INF2Q27J81 1249 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 KRT25Q7Z3Z0 450 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 GPR161Q8N6U8 529 aaKnown RBP15.55■□□□□ 0.08
PRKCB-201ENST00000303531 STAMQ92783 540 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 UTP11Q9Y3A2 253 aaKnown RBP15.55■□□□□ 0.08
PRKCB-201ENST00000303531 INSRP06213 1382 aa15.55■□□□□ 0.08
PRKCB-201ENST00000303531 EIF4G3O43432 1585 aaKnown RBP15.54■□□□□ 0.08
PRKCB-201ENST00000303531 NDC80O14777 642 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 RAB3IL1Q8TBN0 382 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.54■□□□□ 0.08
PRKCB-201ENST00000303531 AGTPBP1Q9UPW5 1226 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 UAP1Q16222 522 aaPredicted RBP15.54■□□□□ 0.08
PRKCB-201ENST00000303531 BLZF1Q9H2G9 400 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 ACTN4O43707 911 aaKnown RBP15.54■□□□□ 0.08
PRKCB-201ENST00000303531 CA8P35219 290 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 MRPS9P82933 396 aaKnown RBP15.54■□□□□ 0.08
PRKCB-201ENST00000303531 IFT20Q8IY31 132 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 VPS54Q9P1Q0 977 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 ARHGEF10O15013 1369 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 HERC4Q5GLZ8 1057 aaPredicted RBP15.54■□□□□ 0.08
PRKCB-201ENST00000303531 TBC1D7Q9P0N9 293 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 GGA1Q9UJY5 639 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 WDR66Q8TBY9 1149 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 TRIM7Q9C029 511 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 MROH5Q6ZUA9 1318 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms