RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 MAPKAPK5Q8IW41 473 aa16.92■□□□□ 0.3
SHCBP1-201ENST00000303383 MAST2Q6P0Q8 1798 aa16.91■□□□□ 0.3
SHCBP1-201ENST00000303383 CYP2D6P10635 497 aa16.91■□□□□ 0.3
SHCBP1-201ENST00000303383 TMEM87AQ8NBN3 555 aa16.91■□□□□ 0.3
SHCBP1-201ENST00000303383 ZSCAN10Q96SZ4 725 aaPredicted RBP16.91■□□□□ 0.3
SHCBP1-201ENST00000303383 CFAP45Q9UL16 551 aa16.91■□□□□ 0.3
SHCBP1-201ENST00000303383 PPP4CP60510 307 aa16.91■□□□□ 0.3
SHCBP1-201ENST00000303383 SBK1Q52WX2 424 aa16.91■□□□□ 0.3
SHCBP1-201ENST00000303383 TRIM22Q8IYM9 498 aa16.91■□□□□ 0.3
SHCBP1-201ENST00000303383 FAM205AQ6ZU69 1335 aa16.91■□□□□ 0.3
SHCBP1-201ENST00000303383 SMIM22K7EJ46 135 aa16.91■□□□□ 0.3
SHCBP1-201ENST00000303383 SSRP1Q08945 709 aaKnown RBP16.91■□□□□ 0.3
SHCBP1-201ENST00000303383 CATIPQ7Z7H3 387 aa16.91■□□□□ 0.3
SHCBP1-201ENST00000303383 NRXN2Q9P2S2 1712 aa16.91■□□□□ 0.3
SHCBP1-201ENST00000303383 ZSCAN23Q3MJ62 389 aa16.9■□□□□ 0.3
SHCBP1-201ENST00000303383 TIAM2Q8IVF5 1701 aa16.9■□□□□ 0.3
SHCBP1-201ENST00000303383 ZNF654Q8IZM8 581 aa16.9■□□□□ 0.3
SHCBP1-201ENST00000303383 SAP30BPQ9UHR5 308 aaKnown RBP16.9■□□□□ 0.3
SHCBP1-201ENST00000303383 ISY1Q9ULR0 285 aaKnown RBP16.9■□□□□ 0.3
SHCBP1-201ENST00000303383 PHKBQ93100 1093 aa16.9■□□□□ 0.3
SHCBP1-201ENST00000303383 ZNF396Q96N95 335 aaPredicted RBP16.9■□□□□ 0.3
SHCBP1-201ENST00000303383 ALG1Q9BT22 464 aa16.9■□□□□ 0.3
SHCBP1-201ENST00000303383 SLC26A6Q9BXS9 759 aa16.9■□□□□ 0.3
SHCBP1-201ENST00000303383 RTFDC1Q9BY42 306 aaPredicted RBP16.9■□□□□ 0.3
SHCBP1-201ENST00000303383 DBNDD1Q9H9R9 158 aa16.9■□□□□ 0.3
SHCBP1-201ENST00000303383 TTF2Q9UNY4 1162 aaKnown RBP16.9■□□□□ 0.3
SHCBP1-201ENST00000303383 FDPSP14324 419 aaKnown RBP16.9■□□□□ 0.3
SHCBP1-201ENST00000303383 AKAP17AQ02040 695 aaKnown RBP16.9■□□□□ 0.3
SHCBP1-201ENST00000303383 RESTQ13127 1097 aa16.9■□□□□ 0.3
SHCBP1-201ENST00000303383 ZNF287Q9HBT7 754 aa16.9■□□□□ 0.3
SHCBP1-201ENST00000303383 CDC27P30260 824 aa16.89■□□□□ 0.29
SHCBP1-201ENST00000303383 CEBPZQ03701 1054 aaKnown RBP16.89■□□□□ 0.29
SHCBP1-201ENST00000303383 FAM47AQ5JRC9 791 aa16.89■□□□□ 0.29
SHCBP1-201ENST00000303383 CCDC82Q8N4S0 544 aa16.89■□□□□ 0.29
SHCBP1-201ENST00000303383 ZNF444Q8N0Y2 327 aaPredicted RBP16.89■□□□□ 0.29
SHCBP1-201ENST00000303383 WASF1Q92558 559 aa16.89■□□□□ 0.29
SHCBP1-201ENST00000303383 GPR75-ASB3A0A0A6YYF3 556 aa16.89■□□□□ 0.29
SHCBP1-201ENST00000303383 ORC4O43929 436 aa16.89■□□□□ 0.29
SHCBP1-201ENST00000303383 OTUD7BQ6GQQ9 843 aa16.89■□□□□ 0.29
SHCBP1-201ENST00000303383 SUGT1Q9Y2Z0 365 aa16.89■□□□□ 0.29
SHCBP1-201ENST00000303383 MYH2Q9UKX2 1941 aa16.88■□□□□ 0.29
SHCBP1-201ENST00000303383 DUOX1Q9NRD9 1551 aa16.88■□□□□ 0.29
SHCBP1-201ENST00000303383 PODNQ7Z5L7 613 aa16.88■□□□□ 0.29
SHCBP1-201ENST00000303383 C12orf60Q5U649 245 aa16.88■□□□□ 0.29
SHCBP1-201ENST00000303383 ENAHQ8N8S7 591 aaPredicted RBP16.87■□□□□ 0.29
SHCBP1-201ENST00000303383 FBXO18Q8NFZ0 1043 aa16.87■□□□□ 0.29
SHCBP1-201ENST00000303383 TMEM63CQ9P1W3 806 aa16.87■□□□□ 0.29
SHCBP1-201ENST00000303383 LRRC37AA6NMS7 1700 aa16.87■□□□□ 0.29
SHCBP1-201ENST00000303383 MRE11P49959 708 aa16.87■□□□□ 0.29
SHCBP1-201ENST00000303383 FANCBQ8NB91 859 aa16.87■□□□□ 0.29
SHCBP1-201ENST00000303383 PDGFDQ9GZP0 370 aaPredicted RBP16.87■□□□□ 0.29
SHCBP1-201ENST00000303383 TTC6Q86TZ1 520 aa16.87■□□□□ 0.29
SHCBP1-201ENST00000303383 SYCE3A1L190 88 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 CALM1P0DP23 149 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 CALM2P0DP24 149 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 CALM3P0DP25 149 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 SCNN1DP51172 638 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 PICALMQ13492 652 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 CC2D2BQ6DHV5 1058 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 SUPT20HQ8NEM7 779 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 BICD2Q8TD16 824 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 DYNLL2Q96FJ2 89 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 COL11A2P13942 1736 aaPredicted RBP16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 TSPY3P0CV98 308 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 TSPY8P0CW00 308 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 TFAP4Q01664 338 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 PPP2R5BQ15173 497 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 FAM163AQ96GL9 167 aaPredicted RBP16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 DAGLAQ9Y4D2 1042 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 RBM5P52756 815 aaKnown RBP eCLIP16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 RCAN1P53805 252 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 EVX2Q03828 476 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 CTCFLQ8NI51 663 aaPredicted RBP16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 SLC16A10Q8TF71 515 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 GRPEL1Q9HAV7 217 aa16.86■□□□□ 0.29
SHCBP1-201ENST00000303383 FGRP09769 529 aa16.85■□□□□ 0.29
SHCBP1-201ENST00000303383 IFNAR1P17181 557 aa16.85■□□□□ 0.29
SHCBP1-201ENST00000303383 SAFBQ15424 915 aaKnown RBP eCLIP16.85■□□□□ 0.29
SHCBP1-201ENST00000303383 SEC23AQ15436 765 aa16.85■□□□□ 0.29
SHCBP1-201ENST00000303383 LEO1Q8WVC0 666 aaPredicted RBP16.85■□□□□ 0.29
SHCBP1-201ENST00000303383 TEKT1Q969V4 418 aa16.85■□□□□ 0.29
SHCBP1-201ENST00000303383 MXD3Q9BW11 206 aa16.85■□□□□ 0.29
SHCBP1-201ENST00000303383 C21orf2O43822 256 aa16.85■□□□□ 0.29
SHCBP1-201ENST00000303383 ECE2O60344 883 aa16.84■□□□□ 0.29
SHCBP1-201ENST00000303383 TTLL6Q8N841 843 aa16.84■□□□□ 0.29
SHCBP1-201ENST00000303383 KAT14Q9H8E8 782 aa16.84■□□□□ 0.29
SHCBP1-201ENST00000303383 ELP1O95163 1332 aa16.84■□□□□ 0.29
SHCBP1-201ENST00000303383 GAKO14976 1311 aa16.84■□□□□ 0.29
SHCBP1-201ENST00000303383 SF3A1Q15459 793 aaKnown RBP16.84■□□□□ 0.29
SHCBP1-201ENST00000303383 CCDC178Q5BJE1 867 aa16.84■□□□□ 0.29
SHCBP1-201ENST00000303383 CCDC183Q5T5S1 534 aa16.84■□□□□ 0.29
SHCBP1-201ENST00000303383 ATL3Q6DD88 541 aa16.84■□□□□ 0.29
SHCBP1-201ENST00000303383 ANP32BQ92688 251 aaKnown RBP16.84■□□□□ 0.29
SHCBP1-201ENST00000303383 AIFM3Q96NN9 605 aa16.84■□□□□ 0.29
SHCBP1-201ENST00000303383 FSD2A1L4K1 749 aa16.84■□□□□ 0.29
SHCBP1-201ENST00000303383 FMNL1O95466 1100 aaPredicted RBP16.84■□□□□ 0.29
SHCBP1-201ENST00000303383 ZNF445P59923 1031 aa16.84■□□□□ 0.29
SHCBP1-201ENST00000303383 BRAPQ7Z569 592 aa16.84■□□□□ 0.29
SHCBP1-201ENST00000303383 CMTR1Q8N1G2 835 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms