RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 EME2A4GXA9 379 aaPredicted RBP16.35■□□□□ 0.21
CDT1-201ENST00000301019 GOLGA6BA6NDN3 693 aa16.35■□□□□ 0.21
CDT1-201ENST00000301019 CPLX1O14810 134 aa16.35■□□□□ 0.21
CDT1-201ENST00000301019 RPS6KA5O75582 802 aa16.34■□□□□ 0.21
CDT1-201ENST00000301019 SARNPP82979 210 aaKnown RBP16.34■□□□□ 0.21
CDT1-201ENST00000301019 GUCY1A3Q02108 690 aa16.34■□□□□ 0.21
CDT1-201ENST00000301019 ANKRD18AQ8IVF6 992 aa16.34■□□□□ 0.21
CDT1-201ENST00000301019 SASH1O94885 1247 aa16.34■□□□□ 0.21
CDT1-201ENST00000301019 PRPF6O94906 941 aaKnown RBP16.34■□□□□ 0.21
CDT1-201ENST00000301019 FDPSP14324 419 aaKnown RBP16.34■□□□□ 0.21
CDT1-201ENST00000301019 GPTP24298 496 aa16.34■□□□□ 0.21
CDT1-201ENST00000301019 C2orf54Q08AI8 447 aa16.34■□□□□ 0.21
CDT1-201ENST00000301019 HOOK1Q9UJC3 728 aaKnown RBP16.34■□□□□ 0.21
CDT1-201ENST00000301019 CDK12Q9NYV4 1490 aaPredicted RBP16.34■□□□□ 0.21
CDT1-201ENST00000301019 AKR1B15C9JRZ8 316 aaPredicted RBP16.34■□□□□ 0.21
CDT1-201ENST00000301019 PFKFB2O60825 505 aa16.34■□□□□ 0.21
CDT1-201ENST00000301019 GIGYF1O75420 1035 aaPredicted RBP16.34■□□□□ 0.21
CDT1-201ENST00000301019 CCNHP51946 323 aaPredicted RBP16.34■□□□□ 0.21
CDT1-201ENST00000301019 POLA2Q14181 598 aa16.34■□□□□ 0.21
CDT1-201ENST00000301019 NEDD9Q14511 834 aa16.34■□□□□ 0.21
CDT1-201ENST00000301019 ARL8AQ96BM9 186 aa16.34■□□□□ 0.21
CDT1-201ENST00000301019 NAPGQ99747 312 aaPredicted RBP16.34■□□□□ 0.21
CDT1-201ENST00000301019 KIF1CO43896 1103 aaKnown RBP16.33■□□□□ 0.21
CDT1-201ENST00000301019 CPP00450 1065 aa16.33■□□□□ 0.21
CDT1-201ENST00000301019 AFMP43652 599 aa16.33■□□□□ 0.21
CDT1-201ENST00000301019 SELENOOQ9BVL4 669 aa16.33■□□□□ 0.21
CDT1-201ENST00000301019 RAB21Q9UL25 225 aa16.33■□□□□ 0.21
CDT1-201ENST00000301019 PHF8Q9UPP1 1060 aa16.33■□□□□ 0.21
CDT1-201ENST00000301019 NRKQ7Z2Y5 1582 aa16.33■□□□□ 0.2
CDT1-201ENST00000301019 COL15A1P39059 1388 aa16.33■□□□□ 0.2
CDT1-201ENST00000301019 TMEM94Q12767 1356 aa16.33■□□□□ 0.2
CDT1-201ENST00000301019 GCKP35557 465 aa16.33■□□□□ 0.2
CDT1-201ENST00000301019 MYSM1Q5VVJ2 828 aa16.33■□□□□ 0.2
CDT1-201ENST00000301019 IQCA1Q86XH1 822 aa16.33■□□□□ 0.2
CDT1-201ENST00000301019 HDAC7Q8WUI4 952 aa16.33■□□□□ 0.2
CDT1-201ENST00000301019 C19orf44Q9H6X5 657 aa16.33■□□□□ 0.2
CDT1-201ENST00000301019 MYO6Q9UM54 1294 aa16.33■□□□□ 0.2
CDT1-201ENST00000301019 STRCQ7RTU9 1775 aa16.33■□□□□ 0.2
CDT1-201ENST00000301019 CSB-PGBD3P0DP91 1061 aa16.32■□□□□ 0.2
CDT1-201ENST00000301019 PIP4K2AP48426 406 aaPredicted RBP16.32■□□□□ 0.2
CDT1-201ENST00000301019 GRIN1Q05586 938 aa16.32■□□□□ 0.2
CDT1-201ENST00000301019 CEP85LQ5SZL2 805 aa16.32■□□□□ 0.2
CDT1-201ENST00000301019 HNRNPLLQ8WVV9 542 aaKnown RBP16.32■□□□□ 0.2
CDT1-201ENST00000301019 MAPK8IP1Q9UQF2 711 aa16.32■□□□□ 0.2
CDT1-201ENST00000301019 OPLAHO14841 1288 aa16.32■□□□□ 0.2
CDT1-201ENST00000301019 KRT14P02533 472 aa16.32■□□□□ 0.2
CDT1-201ENST00000301019 HPDP32754 393 aaPredicted RBP16.32■□□□□ 0.2
CDT1-201ENST00000301019 KCNJ6P48051 423 aa16.32■□□□□ 0.2
CDT1-201ENST00000301019 ESCO1Q5FWF5 840 aa16.32■□□□□ 0.2
CDT1-201ENST00000301019 METTL16Q86W50 562 aaKnown RBP16.32■□□□□ 0.2
CDT1-201ENST00000301019 MSANTD4Q8NCY6 345 aa16.32■□□□□ 0.2
CDT1-201ENST00000301019 GOLGA6L9A6NEM1 432 aa16.32■□□□□ 0.2
CDT1-201ENST00000301019 SNX1Q13596 522 aa16.32■□□□□ 0.2
CDT1-201ENST00000301019 ANO1Q5XXA6 986 aa16.32■□□□□ 0.2
CDT1-201ENST00000301019 NBPF3Q9H094 633 aa16.32■□□□□ 0.2
CDT1-201ENST00000301019 AGPSO00116 658 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 PDIA3P30101 505 aaKnown RBP16.31■□□□□ 0.2
CDT1-201ENST00000301019 GBP2P32456 591 aaPredicted RBP16.31■□□□□ 0.2
CDT1-201ENST00000301019 FXR1P51114 621 aaKnown RBP eCLIP16.31■□□□□ 0.2
CDT1-201ENST00000301019 SLC9C2Q5TAH2 1124 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 SHC4Q6S5L8 630 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 PHKBQ93100 1093 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 FAXDC2Q96IV6 333 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 NEUROD6Q96NK8 337 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 GBP3Q9H0R5 595 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 CARMIL3Q8ND23 1372 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 SRCAPQ6ZRS2 3230 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 AP1G2O75843 785 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 CXCR5P32302 372 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 USP5P45974 858 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 CDR1P51861 262 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 NAA16Q6N069 864 aaPredicted RBP16.31■□□□□ 0.2
CDT1-201ENST00000301019 NUP88Q99567 741 aaPredicted RBP16.31■□□□□ 0.2
CDT1-201ENST00000301019 VPS16Q9H269 839 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 KIF9Q9HAQ2 790 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 PPANQ9NQ55 473 aaKnown RBP16.31■□□□□ 0.2
CDT1-201ENST00000301019 JADE2Q9NQC1 790 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 RTEL1Q9NZ71 1219 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 EHD2Q9NZN4 543 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 STRCP1A6NGW2 1772 aa16.31■□□□□ 0.2
CDT1-201ENST00000301019 RNF225M0QZC1 329 aaPredicted RBP16.3■□□□□ 0.2
CDT1-201ENST00000301019 ATP1A1P05023 1023 aaKnown RBP16.3■□□□□ 0.2
CDT1-201ENST00000301019 SF3B2Q13435 895 aaKnown RBP16.3■□□□□ 0.2
CDT1-201ENST00000301019 AIDAQ96BJ3 306 aa16.3■□□□□ 0.2
CDT1-201ENST00000301019 PRAMEF22A3QJZ6 481 aa16.3■□□□□ 0.2
CDT1-201ENST00000301019 SEMA3FQ13275 785 aa16.3■□□□□ 0.2
CDT1-201ENST00000301019 KCNG4Q8TDN1 519 aa16.3■□□□□ 0.2
CDT1-201ENST00000301019 MAP3K2Q9Y2U5 619 aa16.3■□□□□ 0.2
CDT1-201ENST00000301019 MACROD2A1Z1Q3 448 aa16.3■□□□□ 0.2
CDT1-201ENST00000301019 GOLGA8BA8MQT2 603 aa16.3■□□□□ 0.2
CDT1-201ENST00000301019 COG1Q8WTW3 980 aa16.3■□□□□ 0.2
CDT1-201ENST00000301019 THOC1Q96FV9 657 aaKnown RBP16.3■□□□□ 0.2
CDT1-201ENST00000301019 CCDC114Q96M63 670 aa16.3■□□□□ 0.2
CDT1-201ENST00000301019 RUFY1Q96T51 708 aa16.3■□□□□ 0.2
CDT1-201ENST00000301019 KLC4Q9NSK0 619 aa16.3■□□□□ 0.2
CDT1-201ENST00000301019 IKBKBO14920 756 aa16.29■□□□□ 0.2
CDT1-201ENST00000301019 AMPHP49418 695 aa16.29■□□□□ 0.2
CDT1-201ENST00000301019 HSP90AB4PQ58FF6 505 aa16.29■□□□□ 0.2
CDT1-201ENST00000301019 SMARCC2Q8TAQ2 1214 aa16.29■□□□□ 0.2
CDT1-201ENST00000301019 ZBTB10Q96DT7 871 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms