RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 RAI14Q9P0K7 980 aa15.41■□□□□ 0.06
CTDP1-202ENST00000299543 EXOC5O00471 708 aa15.41■□□□□ 0.06
CTDP1-202ENST00000299543 PRDM1O75626 825 aa15.41■□□□□ 0.06
CTDP1-202ENST00000299543 TOP1P11387 765 aaKnown RBP15.41■□□□□ 0.06
CTDP1-202ENST00000299543 MYL5Q02045 173 aa15.41■□□□□ 0.06
CTDP1-202ENST00000299543 KLHL10Q6JEL2 608 aa15.41■□□□□ 0.06
CTDP1-202ENST00000299543 NACAP1Q9BZK3 213 aa15.41■□□□□ 0.06
CTDP1-202ENST00000299543 PLA2G4AP47712 749 aa15.4■□□□□ 0.06
CTDP1-202ENST00000299543 SLC4A8Q2Y0W8 1093 aa15.4■□□□□ 0.06
CTDP1-202ENST00000299543 AKNAD1Q5T1N1 836 aa15.4■□□□□ 0.06
CTDP1-202ENST00000299543 CCDC150Q8NCX0 1101 aa15.4■□□□□ 0.06
CTDP1-202ENST00000299543 PPP1R13BQ96KQ4 1090 aa15.4■□□□□ 0.06
CTDP1-202ENST00000299543 UBAC1Q9BSL1 405 aa15.4■□□□□ 0.06
CTDP1-202ENST00000299543 CABP5Q9NP86 173 aa15.4■□□□□ 0.06
CTDP1-202ENST00000299543 GTF2A1P52655 376 aaPredicted RBP15.4■□□□□ 0.06
CTDP1-202ENST00000299543 AKAP17AQ02040 695 aaKnown RBP15.4■□□□□ 0.06
CTDP1-202ENST00000299543 SUSD4Q5VX71 490 aa15.4■□□□□ 0.06
CTDP1-202ENST00000299543 NYAP1Q6ZVC0 841 aa15.4■□□□□ 0.06
CTDP1-202ENST00000299543 FOXP4Q8IVH2 680 aaPredicted RBP15.4■□□□□ 0.06
CTDP1-202ENST00000299543 FAM217BQ9NTX9 383 aaPredicted RBP15.4■□□□□ 0.06
CTDP1-202ENST00000299543 KCNG1Q9UIX4 513 aa15.4■□□□□ 0.06
CTDP1-202ENST00000299543 COL5A2P05997 1499 aaPredicted RBP15.4■□□□□ 0.06
CTDP1-202ENST00000299543 RIC1Q4ADV7 1423 aa15.4■□□□□ 0.06
CTDP1-202ENST00000299543 ZNF335Q9H4Z2 1342 aaPredicted RBP15.4■□□□□ 0.06
CTDP1-202ENST00000299543 NOP2P46087 812 aaKnown RBP15.39■□□□□ 0.05
CTDP1-202ENST00000299543 VGLL2Q8N8G2 317 aa15.39■□□□□ 0.05
CTDP1-202ENST00000299543 KRI1Q8N9T8 703 aaKnown RBP15.39■□□□□ 0.05
CTDP1-202ENST00000299543 FHOD1Q9Y613 1164 aa15.39■□□□□ 0.05
CTDP1-202ENST00000299543 CYP7A1P22680 504 aa15.39■□□□□ 0.05
CTDP1-202ENST00000299543 PTPAQ15257 358 aa15.39■□□□□ 0.05
CTDP1-202ENST00000299543 METTL16Q86W50 562 aaKnown RBP15.39■□□□□ 0.05
CTDP1-202ENST00000299543 TICAM2Q86XR7 235 aa15.39■□□□□ 0.05
CTDP1-202ENST00000299543 OSBPL5Q9H0X9 879 aaPredicted RBP15.39■□□□□ 0.05
CTDP1-202ENST00000299543 IMPACTQ9P2X3 320 aa15.39■□□□□ 0.05
CTDP1-202ENST00000299543 TACC3Q9Y6A5 838 aa15.39■□□□□ 0.05
CTDP1-202ENST00000299543 WTIPA6NIX2 430 aaPredicted RBP15.39■□□□□ 0.05
CTDP1-202ENST00000299543 GSG1L2A8MUP6 293 aa15.39■□□□□ 0.05
CTDP1-202ENST00000299543 SLU7O95391 586 aaKnown RBP15.39■□□□□ 0.05
CTDP1-202ENST00000299543 AFMP43652 599 aa15.39■□□□□ 0.05
CTDP1-202ENST00000299543 CLCN6P51797 869 aa15.39■□□□□ 0.05
CTDP1-202ENST00000299543 NTRK3Q16288 839 aa15.39■□□□□ 0.05
CTDP1-202ENST00000299543 NOSTRINQ8IVI9 506 aa15.39■□□□□ 0.05
CTDP1-202ENST00000299543 FAM53CQ9NYF3 392 aa15.39■□□□□ 0.05
CTDP1-202ENST00000299543 SERTAD1Q9UHV2 236 aa15.39■□□□□ 0.05
CTDP1-202ENST00000299543 COL18A1P39060 1754 aa15.38■□□□□ 0.05
CTDP1-202ENST00000299543 URI1O94763 535 aaPredicted RBP15.38■□□□□ 0.05
CTDP1-202ENST00000299543 IGHMBP2P38935 993 aaKnown RBP15.38■□□□□ 0.05
CTDP1-202ENST00000299543 PDE4BQ07343 736 aa15.38■□□□□ 0.05
CTDP1-202ENST00000299543 BICDL1Q6ZP65 573 aa15.38■□□□□ 0.05
CTDP1-202ENST00000299543 OXER1Q8TDS5 423 aa15.38■□□□□ 0.05
CTDP1-202ENST00000299543 PCDHB6Q9Y5E3 794 aa15.38■□□□□ 0.05
CTDP1-202ENST00000299543 KCPQ6ZWJ8 1503 aa15.38■□□□□ 0.05
CTDP1-202ENST00000299543 MYO1CO00159 1063 aa15.38■□□□□ 0.05
CTDP1-202ENST00000299543 USP49Q70CQ1 688 aa15.38■□□□□ 0.05
CTDP1-202ENST00000299543 RASSF4Q9H2L5 321 aa15.38■□□□□ 0.05
CTDP1-202ENST00000299543 CYP2D7A0A087X1C5 515 aa15.38■□□□□ 0.05
CTDP1-202ENST00000299543 CCDC34Q96HJ3 373 aa15.38■□□□□ 0.05
CTDP1-202ENST00000299543 NIP7Q9Y221 180 aaKnown RBP eCLIP15.38■□□□□ 0.05
CTDP1-202ENST00000299543 ZNF142P52746 1687 aaPredicted RBP15.37■□□□□ 0.05
CTDP1-202ENST00000299543 TCRBV5S4A2TA0A5A2 114 aa15.37■□□□□ 0.05
CTDP1-202ENST00000299543 CUTAO60888 179 aa15.37■□□□□ 0.05
CTDP1-202ENST00000299543 STX17P56962 302 aa15.37■□□□□ 0.05
CTDP1-202ENST00000299543 TEX35Q5T0J7 233 aa15.37■□□□□ 0.05
CTDP1-202ENST00000299543 CPLX3Q8WVH0 158 aa15.37■□□□□ 0.05
CTDP1-202ENST00000299543 DRC1Q96MC2 740 aa15.37■□□□□ 0.05
CTDP1-202ENST00000299543 MAP3K14Q99558 947 aa15.37■□□□□ 0.05
CTDP1-202ENST00000299543 KRT23Q9C075 422 aa15.37■□□□□ 0.05
CTDP1-202ENST00000299543 LMTK3Q96Q04 1460 aa15.37■□□□□ 0.05
CTDP1-202ENST00000299543 CDHR2Q9BYE9 1310 aa15.37■□□□□ 0.05
CTDP1-202ENST00000299543 PPP6R2O75170 966 aa15.37■□□□□ 0.05
CTDP1-202ENST00000299543 CASP1P29466 404 aa15.37■□□□□ 0.05
CTDP1-202ENST00000299543 ATP6V1AP38606 617 aa15.37■□□□□ 0.05
CTDP1-202ENST00000299543 ADKP55263 362 aaKnown RBP15.37■□□□□ 0.05
CTDP1-202ENST00000299543 RESP18Q5W5W9 173 aa15.37■□□□□ 0.05
CTDP1-202ENST00000299543 STAMQ92783 540 aa15.37■□□□□ 0.05
CTDP1-202ENST00000299543 VPS54Q9P1Q0 977 aa15.37■□□□□ 0.05
CTDP1-202ENST00000299543 BAZ2BQ9UIF8 2168 aaKnown RBP15.36■□□□□ 0.05
CTDP1-202ENST00000299543 COBLO75128 1261 aa15.36■□□□□ 0.05
CTDP1-202ENST00000299543 GYG1P46976 350 aa15.36■□□□□ 0.05
CTDP1-202ENST00000299543 SYCP1Q15431 976 aa15.36■□□□□ 0.05
CTDP1-202ENST00000299543 DHX58Q96C10 678 aa15.36■□□□□ 0.05
CTDP1-202ENST00000299543 MTMR7Q9Y216 660 aa15.36■□□□□ 0.05
CTDP1-202ENST00000299543 NFE2L3Q9Y4A8 694 aa15.36■□□□□ 0.05
CTDP1-202ENST00000299543 FAM205CA6NFA0 338 aa15.36■□□□□ 0.05
CTDP1-202ENST00000299543 CBFA2T2O43439 604 aa15.36■□□□□ 0.05
CTDP1-202ENST00000299543 PNMA6AP0CW24 399 aaPredicted RBP15.36■□□□□ 0.05
CTDP1-202ENST00000299543 ARID4AP29374 1257 aaPredicted RBP15.36■□□□□ 0.05
CTDP1-202ENST00000299543 RNF216Q9NWF9 866 aaPredicted RBP15.36■□□□□ 0.05
CTDP1-202ENST00000299543 JAG2Q9Y219 1238 aa15.36■□□□□ 0.05
CTDP1-202ENST00000299543 MROH5Q6ZUA9 1318 aa15.36■□□□□ 0.05
CTDP1-202ENST00000299543 WASF1Q92558 559 aa15.36■□□□□ 0.05
CTDP1-202ENST00000299543 CNNM2Q9H8M5 875 aa15.36■□□□□ 0.05
CTDP1-202ENST00000299543 HOOK1Q9UJC3 728 aaKnown RBP15.36■□□□□ 0.05
CTDP1-202ENST00000299543 ADAMTS2O95450 1211 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 KCNQ4P56696 695 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 E2F4Q16254 413 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 MNS1Q8NEH6 495 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 ERO1AQ96HE7 468 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 BPIFA3Q9BQP9 254 aa15.35■□□□□ 0.05
CTDP1-202ENST00000299543 SOS2Q07890 1332 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms