RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 CWC25Q9NXE8 425 aaPredicted RBP12.94□□□□□ -0.34
TRUB1-201ENST00000298746 HPS5Q9UPZ3 1129 aa12.94□□□□□ -0.34
TRUB1-201ENST00000298746 MAPK8IP1Q9UQF2 711 aa12.94□□□□□ -0.34
TRUB1-201ENST00000298746 ADORA1P30542 326 aa12.94□□□□□ -0.34
TRUB1-201ENST00000298746 RFX5P48382 616 aaPredicted RBP12.94□□□□□ -0.34
TRUB1-201ENST00000298746 TMEM139Q8IV31 216 aa12.94□□□□□ -0.34
TRUB1-201ENST00000298746 CNGA4Q8IV77 575 aa12.94□□□□□ -0.34
TRUB1-201ENST00000298746 ANKZF1Q9H8Y5 726 aa12.94□□□□□ -0.34
TRUB1-201ENST00000298746 CABP5Q9NP86 173 aa12.94□□□□□ -0.34
TRUB1-201ENST00000298746 PSD3Q9NYI0 1048 aa12.94□□□□□ -0.34
TRUB1-201ENST00000298746 SYNRGQ9UMZ2 1314 aa12.94□□□□□ -0.34
TRUB1-201ENST00000298746 MYO1BO43795 1136 aa12.94□□□□□ -0.34
TRUB1-201ENST00000298746 CABP4P57796 275 aa12.94□□□□□ -0.34
TRUB1-201ENST00000298746 GRIN1Q05586 938 aa12.94□□□□□ -0.34
TRUB1-201ENST00000298746 ENOX1Q8TC92 643 aaKnown RBP12.94□□□□□ -0.34
TRUB1-201ENST00000298746 RIN2Q8WYP3 895 aaPredicted RBP12.94□□□□□ -0.34
TRUB1-201ENST00000298746 GCP02774 474 aa12.93□□□□□ -0.34
TRUB1-201ENST00000298746 TATP17735 454 aaPredicted RBP12.93□□□□□ -0.34
TRUB1-201ENST00000298746 KRT9P35527 623 aa12.93□□□□□ -0.34
TRUB1-201ENST00000298746 PDIA6Q15084 440 aa12.93□□□□□ -0.34
TRUB1-201ENST00000298746 NOA1Q8NC60 698 aaKnown RBP12.93□□□□□ -0.34
TRUB1-201ENST00000298746 AIDAQ96BJ3 306 aa12.93□□□□□ -0.34
TRUB1-201ENST00000298746 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRUB1-201ENST00000298746 MYO6Q9UM54 1294 aa12.93□□□□□ -0.34
TRUB1-201ENST00000298746 TTF2Q9UNY4 1162 aaKnown RBP12.93□□□□□ -0.34
TRUB1-201ENST00000298746 ZFYP08048 801 aaPredicted RBP12.93□□□□□ -0.34
TRUB1-201ENST00000298746 BMP6P22004 513 aa12.93□□□□□ -0.34
TRUB1-201ENST00000298746 XAGE2Q96GT9 111 aa12.93□□□□□ -0.34
TRUB1-201ENST00000298746 JADE2Q9NQC1 790 aa12.93□□□□□ -0.34
TRUB1-201ENST00000298746 INCENPQ9NQS7 918 aa12.93□□□□□ -0.34
TRUB1-201ENST00000298746 L1RE1Q9UN81 338 aa12.93□□□□□ -0.34
TRUB1-201ENST00000298746 AKAP2Q9Y2D5 859 aa12.93□□□□□ -0.34
TRUB1-201ENST00000298746 UTYO14607 1347 aa12.93□□□□□ -0.34
TRUB1-201ENST00000298746 SETQ01105 290 aaPredicted RBP12.93□□□□□ -0.34
TRUB1-201ENST00000298746 RRAGBQ5VZM2 374 aa12.93□□□□□ -0.34
TRUB1-201ENST00000298746 TTC19Q6DKK2 380 aaPredicted RBP12.93□□□□□ -0.34
TRUB1-201ENST00000298746 KANK3Q6NY19 840 aa12.93□□□□□ -0.34
TRUB1-201ENST00000298746 APOA5Q6Q788 366 aa12.93□□□□□ -0.34
TRUB1-201ENST00000298746 NOSTRINQ8IVI9 506 aa12.93□□□□□ -0.34
TRUB1-201ENST00000298746 APPBP2Q92624 585 aa12.93□□□□□ -0.34
TRUB1-201ENST00000298746 EBAG9O00559 213 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 CDC25AP30304 524 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 CCT5P48643 541 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 ANTXR2P58335 489 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 NR5A1Q13285 461 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 METTL24Q5JXM2 366 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 MB21D2Q8IYB1 491 aaPredicted RBP12.92□□□□□ -0.34
TRUB1-201ENST00000298746 WASF1Q92558 559 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 CTAGE1Q96RT6 745 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 TAB2Q9NYJ8 693 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 WWC3Q9ULE0 1092 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 TBC1D2BQ9UPU7 963 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 CTNND2Q9UQB3 1225 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 ZMYM6O95789 1325 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 MAP2K7O14733 419 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 STIM1Q13586 685 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 NAPBQ9H115 298 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 SENP2Q9HC62 589 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 CEP131Q9UPN4 1083 aa12.92□□□□□ -0.34
TRUB1-201ENST00000298746 SHTN1A0MZ66 631 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 PLCD1P51178 756 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 USP49Q70CQ1 688 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 PACS2Q86VP3 889 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 GSPT2Q8IYD1 628 aaKnown RBP12.91□□□□□ -0.34
TRUB1-201ENST00000298746 CNNM1Q9NRU3 951 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 HPSEQ9Y251 543 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 hCG_1642624A0A1W2PR95 340 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 NEDD4P46934 1319 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 WHAMMP3Q1A5X7 153 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 CCDC122Q5T0U0 273 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 FAM76AQ8TAV0 307 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 PANX2Q96RD6 677 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 NAA15Q9BXJ9 866 aaKnown RBP12.91□□□□□ -0.34
TRUB1-201ENST00000298746 MED4Q9NPJ6 270 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 TECPR2O15040 1411 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 PPARDQ03181 441 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 PTPAQ15257 358 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 TMTC1Q8IUR5 882 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 TEX13AQ9BXU3 409 aaPredicted RBP12.91□□□□□ -0.34
TRUB1-201ENST00000298746 SLC52A2Q9HAB3 445 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 HDAC6Q9UBN7 1215 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 PCDHB6Q9Y5E3 794 aa12.91□□□□□ -0.34
TRUB1-201ENST00000298746 RIMBP3CA6NJZ7 1639 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 RIMBP3BA6NNM3 1639 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 RIMBP3Q9UFD9 1639 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 JCADQ9P266 1359 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 LOC102724159A0A0B4J2E5 919 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 LRRIQ3A6PVS8 624 aaPredicted RBP12.9□□□□□ -0.34
TRUB1-201ENST00000298746 SRGAP2O75044 1071 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 TUBB4BP68371 445 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 UBXN1Q04323 297 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 PWP2Q15269 919 aaKnown RBP12.9□□□□□ -0.34
TRUB1-201ENST00000298746 LRRC31Q6UY01 552 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 UBXN6Q9BZV1 441 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 CSRNP2Q9H175 543 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 BLZF1Q9H2G9 400 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 PTPRUQ92729 1446 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 GOLGA6CA6NDK9 693 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 MFAP3LO75121 409 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 ERLIN2O94905 339 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms