RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 CXCL9Q07325 125 aa21.76■■□□□ 1.07
SEC61A2-201ENST00000298428 GMLQ99445 158 aa21.76■■□□□ 1.07
SEC61A2-201ENST00000298428 LY9Q9HBG7 655 aa21.76■■□□□ 1.07
SEC61A2-201ENST00000298428 MYH1P12882 1939 aa21.75■■□□□ 1.07
SEC61A2-201ENST00000298428 ERICH2A1L162 156 aa21.75■■□□□ 1.07
SEC61A2-201ENST00000298428 LIFRP42702 1097 aa21.75■■□□□ 1.07
SEC61A2-201ENST00000298428 CFAP100Q494V2 611 aa21.75■■□□□ 1.07
SEC61A2-201ENST00000298428 ZKSCAN3Q9BRR0 538 aa21.75■■□□□ 1.07
SEC61A2-201ENST00000298428 UBAC1Q9BSL1 405 aa21.75■■□□□ 1.07
SEC61A2-201ENST00000298428 DDX4Q9NQI0 724 aaKnown RBP21.75■■□□□ 1.07
SEC61A2-201ENST00000298428 ZBTB12Q9Y330 459 aaPredicted RBP21.75■■□□□ 1.07
SEC61A2-201ENST00000298428 GOLGA8BA8MQT2 603 aa21.75■■□□□ 1.07
SEC61A2-201ENST00000298428 GJB2P29033 226 aa21.75■■□□□ 1.07
SEC61A2-201ENST00000298428 PKP1Q13835 747 aa21.75■■□□□ 1.07
SEC61A2-201ENST00000298428 CIAPIN1Q6FI81 312 aa21.75■■□□□ 1.07
SEC61A2-201ENST00000298428 SGMS1Q86VZ5 419 aa21.75■■□□□ 1.07
SEC61A2-201ENST00000298428 DYNLL2Q96FJ2 89 aa21.75■■□□□ 1.07
SEC61A2-201ENST00000298428 HDAC9Q9UKV0 1011 aa21.75■■□□□ 1.07
SEC61A2-201ENST00000298428 ECM29Q5VYK3 1845 aa21.74■■□□□ 1.07
SEC61A2-201ENST00000298428 CCT2P78371 535 aaKnown RBP21.74■■□□□ 1.07
SEC61A2-201ENST00000298428 NFXL1Q6ZNB6 911 aa21.74■■□□□ 1.07
SEC61A2-201ENST00000298428 AGBL3Q8NEM8 1001 aa21.74■■□□□ 1.07
SEC61A2-201ENST00000298428 SENP2Q9HC62 589 aa21.74■■□□□ 1.07
SEC61A2-201ENST00000298428 WTAPQ15007 396 aa21.73■■□□□ 1.07
SEC61A2-201ENST00000298428 OGFOD1Q8N543 542 aa21.73■■□□□ 1.07
SEC61A2-201ENST00000298428 DTNBO60941 627 aa21.73■■□□□ 1.07
SEC61A2-201ENST00000298428 NT5C2P49902 561 aa21.73■■□□□ 1.07
SEC61A2-201ENST00000298428 IQCA1Q86XH1 822 aa21.73■■□□□ 1.07
SEC61A2-201ENST00000298428 CHMP4CQ96CF2 233 aa21.73■■□□□ 1.07
SEC61A2-201ENST00000298428 OSBPL5Q9H0X9 879 aaPredicted RBP21.73■■□□□ 1.07
SEC61A2-201ENST00000298428 MKNK2Q9HBH9 465 aa21.73■■□□□ 1.07
SEC61A2-201ENST00000298428 NCOA5Q9HCD5 579 aaKnown RBP21.73■■□□□ 1.07
SEC61A2-201ENST00000298428 TNKSO95271 1327 aa21.72■■□□□ 1.07
SEC61A2-201ENST00000298428 CCDC69A6NI79 296 aa21.72■■□□□ 1.07
SEC61A2-201ENST00000298428 NFIAQ12857 509 aa21.72■■□□□ 1.07
SEC61A2-201ENST00000298428 TNIP1Q15025 636 aa21.72■■□□□ 1.07
SEC61A2-201ENST00000298428 APOA5Q6Q788 366 aa21.72■■□□□ 1.07
SEC61A2-201ENST00000298428 TNPO1Q92973 898 aaKnown RBP21.72■■□□□ 1.07
SEC61A2-201ENST00000298428 ZSCAN10Q96SZ4 725 aaPredicted RBP21.72■■□□□ 1.07
SEC61A2-201ENST00000298428 LLPHQ9BRT6 129 aaKnown RBP21.72■■□□□ 1.07
SEC61A2-201ENST00000298428 ZNF287Q9HBT7 754 aa21.72■■□□□ 1.07
SEC61A2-201ENST00000298428 HPS5Q9UPZ3 1129 aa21.72■■□□□ 1.07
SEC61A2-201ENST00000298428 TSPY2A6NKD2 308 aa21.71■■□□□ 1.07
SEC61A2-201ENST00000298428 PRELPP51888 382 aa21.71■■□□□ 1.07
SEC61A2-201ENST00000298428 FAM47AQ5JRC9 791 aa21.71■■□□□ 1.07
SEC61A2-201ENST00000298428 C16orf86Q6ZW13 317 aa21.71■■□□□ 1.07
SEC61A2-201ENST00000298428 TTC6Q86TZ1 520 aa21.71■■□□□ 1.07
SEC61A2-201ENST00000298428 TMTC2Q8N394 836 aa21.71■■□□□ 1.07
SEC61A2-201ENST00000298428 SLC44A5Q8NCS7 719 aa21.71■■□□□ 1.07
SEC61A2-201ENST00000298428 IDI2Q9BXS1 227 aa21.71■■□□□ 1.07
SEC61A2-201ENST00000298428 CACNB3P54284 484 aa21.71■■□□□ 1.07
SEC61A2-201ENST00000298428 SEC23AQ15436 765 aa21.71■■□□□ 1.07
SEC61A2-201ENST00000298428 RAB11FIP4Q86YS3 637 aa21.71■■□□□ 1.07
SEC61A2-201ENST00000298428 PRMT6Q96LA8 375 aaPredicted RBP21.71■■□□□ 1.07
SEC61A2-201ENST00000298428 SYT17Q9BSW7 474 aa21.71■■□□□ 1.07
SEC61A2-201ENST00000298428 SLC12A7Q9Y666 1083 aa21.71■■□□□ 1.07
SEC61A2-201ENST00000298428 JAK2O60674 1132 aa21.7■■□□□ 1.06
SEC61A2-201ENST00000298428 NFKBIBQ15653 356 aa21.7■■□□□ 1.06
SEC61A2-201ENST00000298428 TDRD3Q9H7E2 651 aaKnown RBP21.7■■□□□ 1.06
SEC61A2-201ENST00000298428 SPDYE2BA6NHP3 402 aa21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 ZBTB43O43298 467 aa21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 DHX16O60231 1041 aaKnown RBP21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 SPDYE6P0CI01 402 aa21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 CDK8P49336 464 aa21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 METAP2P50579 478 aaKnown RBP eCLIP21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 DLGAP5Q15398 846 aa21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 SYNE3Q6ZMZ3 975 aa21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 MICU3Q86XE3 530 aa21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 ENAHQ8N8S7 591 aaPredicted RBP21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 NSUN7Q8NE18 718 aaKnown RBP21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 ZDHHC9Q9Y397 364 aa21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 BRD1O95696 1058 aa21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 SYT1P21579 422 aa21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 EIF6P56537 245 aaKnown RBP21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 TFAP4Q01664 338 aa21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 ARHGAP27Q6ZUM4 889 aa21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 ZNF444Q8N0Y2 327 aaPredicted RBP21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 SMARCC2Q8TAQ2 1214 aa21.69■■□□□ 1.06
SEC61A2-201ENST00000298428 FZD9O00144 591 aa21.68■■□□□ 1.06
SEC61A2-201ENST00000298428 NPM3O75607 178 aaKnown RBP21.68■■□□□ 1.06
SEC61A2-201ENST00000298428 CTDNEP1O95476 244 aa21.68■■□□□ 1.06
SEC61A2-201ENST00000298428 HLA-DOAP06340 250 aa21.68■■□□□ 1.06
SEC61A2-201ENST00000298428 IFIT1BQ5T764 474 aaKnown RBP21.68■■□□□ 1.06
SEC61A2-201ENST00000298428 FAM198AQ9UFP1 575 aa21.68■■□□□ 1.06
SEC61A2-201ENST00000298428 WDR33Q9C0J8 1336 aaKnown RBP21.67■■□□□ 1.06
SEC61A2-201ENST00000298428 PTPDC1A2A3K4 754 aa21.67■■□□□ 1.06
SEC61A2-201ENST00000298428 RXRAP19793 462 aa21.67■■□□□ 1.06
SEC61A2-201ENST00000298428 RASA1P20936 1047 aa21.67■■□□□ 1.06
SEC61A2-201ENST00000298428 TCP10Q12799 353 aa21.67■■□□□ 1.06
SEC61A2-201ENST00000298428 MYL10Q9BUA6 226 aa21.67■■□□□ 1.06
SEC61A2-201ENST00000298428 GOLGA8AA7E2F4 631 aa21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 CPLX1O14810 134 aa21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 STX6O43752 255 aa21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 NMT2O60551 498 aa21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 TSPY3P0CV98 308 aa21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 TSPY8P0CW00 308 aa21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 RPS12P25398 132 aaKnown RBP21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 HMGN5P82970 282 aaKnown RBP21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 GABPAQ06546 454 aa21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 ZFPM1Q8IX07 1006 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms