RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 LNPKQ9C0E8 428 aa7.24□□□□□ -1.25
SSX3-201ENST00000298396 SIPA1L1O43166 1804 aa7.24□□□□□ -1.25
SSX3-201ENST00000298396 ZC3H4Q9UPT8 1303 aaKnown RBP7.24□□□□□ -1.25
SSX3-201ENST00000298396 DDX60LQ5H9U9 1706 aaKnown RBP7.24□□□□□ -1.25
SSX3-201ENST00000298396 TRPM7Q96QT4 1865 aa7.24□□□□□ -1.25
SSX3-201ENST00000298396 TLL1O43897 1013 aa7.23□□□□□ -1.25
SSX3-201ENST00000298396 DXOO77932 396 aaKnown RBP7.23□□□□□ -1.25
SSX3-201ENST00000298396 DDNO94850 711 aaPredicted RBP7.23□□□□□ -1.25
SSX3-201ENST00000298396 GTF2IP78347 998 aa7.23□□□□□ -1.25
SSX3-201ENST00000298396 CSPP1Q1MSJ5 1256 aa7.23□□□□□ -1.25
SSX3-201ENST00000298396 PODNQ7Z5L7 613 aa7.23□□□□□ -1.25
SSX3-201ENST00000298396 CHD1LQ86WJ1 897 aa7.23□□□□□ -1.25
SSX3-201ENST00000298396 PLEKHM2Q8IWE5 1019 aa7.23□□□□□ -1.25
SSX3-201ENST00000298396 CLASRPQ8N2M8 674 aaKnown RBP7.23□□□□□ -1.25
SSX3-201ENST00000298396 PRR7Q8TB68 274 aa7.23□□□□□ -1.25
SSX3-201ENST00000298396 PI4K2BQ8TCG2 481 aa7.23□□□□□ -1.25
SSX3-201ENST00000298396 ZNF384Q8TF68 577 aa7.23□□□□□ -1.25
SSX3-201ENST00000298396 SPSB2Q99619 263 aa7.23□□□□□ -1.25
SSX3-201ENST00000298396 BCL11AQ9H165 835 aa7.23□□□□□ -1.25
SSX3-201ENST00000298396 PPP4R2Q9NY27 417 aa7.23□□□□□ -1.25
SSX3-201ENST00000298396 HMG20BQ9P0W2 317 aa7.23□□□□□ -1.25
SSX3-201ENST00000298396 NAV1Q8NEY1 1877 aa7.23□□□□□ -1.25
SSX3-201ENST00000298396 AOX1Q06278 1338 aa7.23□□□□□ -1.25
SSX3-201ENST00000298396 USP17L3A6NCW0 530 aa7.22□□□□□ -1.25
SSX3-201ENST00000298396 USP17L4A6NCW7 530 aa7.22□□□□□ -1.25
SSX3-201ENST00000298396 GLTPD2A6NH11 291 aa7.22□□□□□ -1.25
SSX3-201ENST00000298396 EGFRP00533 1210 aa7.22□□□□□ -1.25
SSX3-201ENST00000298396 CYP2E1P05181 493 aaPredicted RBP7.22□□□□□ -1.25
SSX3-201ENST00000298396 IFIT2P09913 472 aaKnown RBP7.22□□□□□ -1.25
SSX3-201ENST00000298396 GMPSP49915 693 aaPredicted RBP7.22□□□□□ -1.25
SSX3-201ENST00000298396 SCNN1DP51172 638 aa7.22□□□□□ -1.25
SSX3-201ENST00000298396 CHAF1AQ13111 956 aaPredicted RBP7.22□□□□□ -1.25
SSX3-201ENST00000298396 STRIP1Q5VSL9 837 aa7.22□□□□□ -1.25
SSX3-201ENST00000298396 CIAPIN1Q6FI81 312 aa7.22□□□□□ -1.25
SSX3-201ENST00000298396 CENPQQ7L2Z9 268 aaPredicted RBP7.22□□□□□ -1.25
SSX3-201ENST00000298396 USP17L1Q7RTZ2 530 aa7.22□□□□□ -1.25
SSX3-201ENST00000298396 JDP2Q8WYK2 163 aa7.22□□□□□ -1.25
SSX3-201ENST00000298396 EDC3Q96F86 508 aaKnown RBP7.22□□□□□ -1.25
SSX3-201ENST00000298396 ZNF512BQ96KM6 892 aaPredicted RBP7.22□□□□□ -1.25
SSX3-201ENST00000298396 ANTXR1Q9H6X2 564 aa7.22□□□□□ -1.25
SSX3-201ENST00000298396 PIH1D3Q9NQM4 214 aaKnown RBP7.22□□□□□ -1.25
SSX3-201ENST00000298396 SNRKQ9NRH2 765 aa7.22□□□□□ -1.25
SSX3-201ENST00000298396 STAP2Q9UGK3 403 aa7.22□□□□□ -1.25
SSX3-201ENST00000298396 PCDHAC2Q9Y5I4 1007 aa7.22□□□□□ -1.25
SSX3-201ENST00000298396 PDS5AQ29RF7 1337 aaKnown RBP7.22□□□□□ -1.25
SSX3-201ENST00000298396 MYH8P13535 1937 aa7.21□□□□□ -1.25
SSX3-201ENST00000298396 LAMB1P07942 1786 aa7.21□□□□□ -1.25
SSX3-201ENST00000298396 OTOFQ9HC10 1997 aa7.21□□□□□ -1.26
SSX3-201ENST00000298396 CHGBP05060 677 aa7.21□□□□□ -1.26
SSX3-201ENST00000298396 JUNDP17535 347 aa7.21□□□□□ -1.26
SSX3-201ENST00000298396 ATP5JP18859 108 aa7.21□□□□□ -1.26
SSX3-201ENST00000298396 MX1P20591 662 aa7.21□□□□□ -1.26
SSX3-201ENST00000298396 ZAP70P43403 619 aa7.21□□□□□ -1.26
SSX3-201ENST00000298396 PDE1AP54750 535 aa7.21□□□□□ -1.26
SSX3-201ENST00000298396 EIF6P56537 245 aaKnown RBP7.21□□□□□ -1.26
SSX3-201ENST00000298396 KCNC4Q03721 635 aa7.21□□□□□ -1.26
SSX3-201ENST00000298396 MCM6Q14566 821 aa7.21□□□□□ -1.26
SSX3-201ENST00000298396 CAVIN4Q5BKX8 364 aa7.21□□□□□ -1.26
SSX3-201ENST00000298396 TTC39AQ5SRH9 613 aa7.21□□□□□ -1.26
SSX3-201ENST00000298396 TTLL5Q6EMB2 1281 aa7.21□□□□□ -1.26
SSX3-201ENST00000298396 TBC1D9Q6ZT07 1266 aa7.21□□□□□ -1.26
SSX3-201ENST00000298396 GPC2Q8N158 579 aa7.21□□□□□ -1.26
SSX3-201ENST00000298396 SPATA5Q8NB90 893 aa7.21□□□□□ -1.26
SSX3-201ENST00000298396 CCDC136Q96JN2 1154 aa7.21□□□□□ -1.26
SSX3-201ENST00000298396 SALL1Q9NSC2 1324 aa7.21□□□□□ -1.26
SSX3-201ENST00000298396 PAPPA2Q9BXP8 1791 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 UQCRFS1P1P0C7P4 283 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 PRDX5P30044 214 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 EPS15P42566 896 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 FKBP1AP62942 108 aaKnown RBP7.2□□□□□ -1.26
SSX3-201ENST00000298396 SLFNL1Q499Z3 407 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 MFSD14BQ5SR56 506 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 GORABQ5T7V8 394 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 LYPD8Q6UX82 237 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 VPS37DQ86XT2 251 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 AGBL3Q8NEM8 1001 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 TRPM4Q8TD43 1214 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.2□□□□□ -1.26
SSX3-201ENST00000298396 HAUS7Q99871 368 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 BOLA2Q9H3K6 86 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 OSBPL3Q9H4L5 887 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 NMRK2Q9NPI5 230 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 ECHDC1Q9NTX5 307 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 DENND2AQ9ULE3 1009 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 GJA3Q9Y6H8 435 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 TTC41PQ6P2S7 1318 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 LAMA4Q16363 1823 aa7.2□□□□□ -1.26
SSX3-201ENST00000298396 F8W031 263 aaPredicted RBP7.19□□□□□ -1.26
SSX3-201ENST00000298396 MAP4K4O95819 1239 aaPredicted RBP7.19□□□□□ -1.26
SSX3-201ENST00000298396 USP17L8P0C7I0 530 aa7.19□□□□□ -1.26
SSX3-201ENST00000298396 GSPT1P15170 499 aaKnown RBP7.19□□□□□ -1.26
SSX3-201ENST00000298396 HIRAP54198 1017 aaPredicted RBP7.19□□□□□ -1.26
SSX3-201ENST00000298396 ZNF280AP59817 542 aaPredicted RBP7.19□□□□□ -1.26
SSX3-201ENST00000298396 TNIP1Q15025 636 aa7.19□□□□□ -1.26
SSX3-201ENST00000298396 PTPRNQ16849 979 aa7.19□□□□□ -1.26
SSX3-201ENST00000298396 CCDC158Q5M9N0 1113 aa7.19□□□□□ -1.26
SSX3-201ENST00000298396 ADGRA1Q86SQ6 560 aa7.19□□□□□ -1.26
SSX3-201ENST00000298396 KIAA0825Q8IV33 1275 aa7.19□□□□□ -1.26
SSX3-201ENST00000298396 NKX2-3Q8TAU0 364 aa7.19□□□□□ -1.26
SSX3-201ENST00000298396 ZBED3Q96IU2 234 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms