RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 IFFO1Q0D2I5 559 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 DOK7Q18PE1 504 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 CPXCR1Q8N123 301 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 SSH2Q76I76 1423 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.14■□□□□ 0.01
HPS3-201ENST00000296051 ANKRD65E5RJM6 399 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 BEND3Q5T5X7 828 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 BRINP3Q76B58 766 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 KIAA0825Q8IV33 1275 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 VWA3AA6NCI4 1184 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 CALM1P0DP23 149 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 CALM2P0DP24 149 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 CALM3P0DP25 149 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 IRX3P78415 501 aaPredicted RBP15.13■□□□□ 0.01
HPS3-201ENST00000296051 MAP3K9P80192 1104 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 TCIRG1Q13488 830 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 CCDC122Q5T0U0 273 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 ADALQ6DHV7 355 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 CMTR1Q8N1G2 835 aaKnown RBP15.13■□□□□ 0.01
HPS3-201ENST00000296051 PPP1R13BQ96KQ4 1090 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 EPC1Q9H2F5 836 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 CYP21A2P08686 494 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 POTEJP0CG39 1038 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 GNAT2P19087 354 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 PRPF4BQ13523 1007 aaKnown RBP15.13■□□□□ 0.01
HPS3-201ENST00000296051 ZNF174Q15697 407 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 KRT40Q6A162 431 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 ARHGEF25Q86VW2 580 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 WDR66Q8TBY9 1149 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 EEF2KMTQ96G04 330 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 SLF1Q9BQI6 1058 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 LLPHQ9BRT6 129 aaKnown RBP15.13■□□□□ 0.01
HPS3-201ENST00000296051 KCNF1Q9H3M0 494 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 ST7Q9NRC1 585 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 AATFQ9NY61 560 aaKnown RBP eCLIP15.13■□□□□ 0.01
HPS3-201ENST00000296051 TMOD4Q9NZQ9 345 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 ZBTB21Q9ULJ3 1066 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 FAM135BQ49AJ0 1406 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 DDIT3P35638 169 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 RNASE9P60153 205 aaKnown RBP15.13■□□□□ 0.01
HPS3-201ENST00000296051 SF3A3Q12874 501 aaKnown RBP eCLIP15.13■□□□□ 0.01
HPS3-201ENST00000296051 TSG101Q99816 390 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 MMRN2Q9H8L6 949 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 ZCCHC17Q9NP64 241 aaKnown RBP15.13■□□□□ 0.01
HPS3-201ENST00000296051 GJB4Q9NTQ9 266 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 COBLO75128 1261 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 GCKRQ14397 625 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 IFT81Q8WYA0 676 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 XAGE2Q96GT9 111 aa15.13■□□□□ 0.01
HPS3-201ENST00000296051 GOLGA6L7A0A1B0GV03 622 aa15.12■□□□□ 0.01
HPS3-201ENST00000296051 BACH1O14867 736 aa15.12■□□□□ 0.01
HPS3-201ENST00000296051 DIS3L2Q8IYB7 885 aaKnown RBP15.12■□□□□ 0.01
HPS3-201ENST00000296051 ATP1A3P13637 1013 aa15.12■□□□□ 0.01
HPS3-201ENST00000296051 PI4K2BQ8TCG2 481 aa15.12■□□□□ 0.01
HPS3-201ENST00000296051 SMCR8Q8TEV9 937 aaPredicted RBP15.12■□□□□ 0.01
HPS3-201ENST00000296051 CTAGE1Q96RT6 745 aa15.12■□□□□ 0.01
HPS3-201ENST00000296051 SPTLC3Q9NUV7 552 aa15.12■□□□□ 0.01
HPS3-201ENST00000296051 PKD2L1Q9P0L9 805 aa15.12■□□□□ 0.01
HPS3-201ENST00000296051 MYO6Q9UM54 1294 aa15.12■□□□□ 0.01
HPS3-201ENST00000296051 NOD1Q9Y239 953 aa15.12■□□□□ 0.01
HPS3-201ENST00000296051 CLCN6P51797 869 aa15.12■□□□□ 0.01
HPS3-201ENST00000296051 SLFNL1Q499Z3 407 aa15.12■□□□□ 0.01
HPS3-201ENST00000296051 MFSD14BQ5SR56 506 aa15.12■□□□□ 0.01
HPS3-201ENST00000296051 FCHSD1Q86WN1 690 aa15.12■□□□□ 0.01
HPS3-201ENST00000296051 CNKSR1Q969H4 720 aa15.12■□□□□ 0.01
HPS3-201ENST00000296051 C6orf50Q9HD87 102 aa15.12■□□□□ 0.01
HPS3-201ENST00000296051 PRAMEF22A3QJZ6 481 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 STAT6P42226 847 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 TERF2Q15554 542 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 ATL3Q6DD88 541 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 CEP57Q86XR8 500 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 GPCPD1Q9NPB8 672 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 TTF2Q9UNY4 1162 aaKnown RBP15.11■□□□□ 0.01
HPS3-201ENST00000296051 ZBTB1Q9Y2K1 713 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 AFF2P51816 1311 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 HOXB7P09629 217 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 MCM7P33993 719 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 CRKLP46109 303 aaKnown RBP15.11■□□□□ 0.01
HPS3-201ENST00000296051 FNBP4Q8N3X1 1017 aaPredicted RBP15.11■□□□□ 0.01
HPS3-201ENST00000296051 DYDC1Q8WWB3 177 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 DNAI2Q9GZS0 605 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.11■□□□□ 0.01
HPS3-201ENST00000296051 GINS2Q9Y248 185 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 PPP2R2CQ9Y2T4 447 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 LUC7L2Q9Y383 392 aaKnown RBP15.11■□□□□ 0.01
HPS3-201ENST00000296051 CYLC1P35663 651 aaPredicted RBP15.11■□□□□ 0.01
HPS3-201ENST00000296051 KMT5BQ4FZB7 885 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 IL25Q9H293 177 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 ARMT1Q9H993 441 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 HSF2BPO75031 334 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 GIGYF1O75420 1035 aaPredicted RBP15.11■□□□□ 0.01
HPS3-201ENST00000296051 KRT9P35527 623 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 PGBD1Q96JS3 809 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 ALS2CR12Q96Q35 445 aa15.11■□□□□ 0.01
HPS3-201ENST00000296051 TBCAO75347 108 aaKnown RBP15.1■□□□□ 0.01
HPS3-201ENST00000296051 NEFHP12036 1026 aa15.1■□□□□ 0.01
HPS3-201ENST00000296051 HNRNPH2P55795 449 aaKnown RBP15.1■□□□□ 0.01
HPS3-201ENST00000296051 KIF5AQ12840 1032 aa15.1■□□□□ 0.01
HPS3-201ENST00000296051 GPAA1O43292 621 aa15.1■□□□□ 0.01
HPS3-201ENST00000296051 ZSCAN20P17040 1043 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 1004.2 ms