RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 CYB5R4Q7L1T6 521 aa10.79□□□□□ -0.68
CLRN1-201ENST00000295911 BRAPQ7Z569 592 aa10.79□□□□□ -0.68
CLRN1-201ENST00000295911 EPB41L4AQ9HCS5 686 aaPredicted RBP10.79□□□□□ -0.68
CLRN1-201ENST00000295911 ABCF2Q9UG63 623 aa10.79□□□□□ -0.68
CLRN1-201ENST00000295911 ANAPC4Q9UJX5 808 aa10.79□□□□□ -0.68
CLRN1-201ENST00000295911 LAMB1P07942 1786 aa10.78□□□□□ -0.68
CLRN1-201ENST00000295911 DLEC1Q9Y238 1755 aa10.78□□□□□ -0.68
CLRN1-201ENST00000295911 ERICH2A1L162 156 aa10.78□□□□□ -0.68
CLRN1-201ENST00000295911 CCDC69A6NI79 296 aa10.78□□□□□ -0.68
CLRN1-201ENST00000295911 ESPNB1AK53 854 aa10.78□□□□□ -0.68
CLRN1-201ENST00000295911 ARHGAP33O14559 1287 aa10.78□□□□□ -0.68
CLRN1-201ENST00000295911 IFIT3O14879 490 aaKnown RBP10.78□□□□□ -0.68
CLRN1-201ENST00000295911 HIBADHP31937 336 aaKnown RBP10.78□□□□□ -0.68
CLRN1-201ENST00000295911 ADD1P35611 737 aaKnown RBP10.78□□□□□ -0.68
CLRN1-201ENST00000295911 RCAN1P53805 252 aa10.78□□□□□ -0.68
CLRN1-201ENST00000295911 SPTY2D1Q68D10 685 aaPredicted RBP10.78□□□□□ -0.68
CLRN1-201ENST00000295911 APOA5Q6Q788 366 aa10.78□□□□□ -0.68
CLRN1-201ENST00000295911 SEPT12Q8IYM1 358 aa10.78□□□□□ -0.68
CLRN1-201ENST00000295911 LCORLQ8N3X6 602 aa10.78□□□□□ -0.68
CLRN1-201ENST00000295911 FBXO18Q8NFZ0 1043 aa10.78□□□□□ -0.68
CLRN1-201ENST00000295911 FUCA2Q9BTY2 467 aa10.78□□□□□ -0.68
CLRN1-201ENST00000295911 LY9Q9HBG7 655 aa10.78□□□□□ -0.68
CLRN1-201ENST00000295911 ZSWIM5Q9P217 1185 aa10.78□□□□□ -0.68
CLRN1-201ENST00000295911 NID2Q14112 1375 aa10.78□□□□□ -0.68
CLRN1-201ENST00000295911 BRWD3Q6RI45 1802 aa10.78□□□□□ -0.68
CLRN1-201ENST00000295911 CTAGE5O15320 804 aa10.77□□□□□ -0.68
CLRN1-201ENST00000295911 TM4SF1P30408 202 aa10.77□□□□□ -0.68
CLRN1-201ENST00000295911 CTDSPL2Q05D32 466 aa10.77□□□□□ -0.68
CLRN1-201ENST00000295911 PPP2R5BQ15173 497 aa10.77□□□□□ -0.68
CLRN1-201ENST00000295911 SLC27A3Q5K4L6 730 aa10.77□□□□□ -0.68
CLRN1-201ENST00000295911 FAM196AQ6ZSG2 479 aa10.77□□□□□ -0.68
CLRN1-201ENST00000295911 BICD2Q8TD16 824 aa10.77□□□□□ -0.68
CLRN1-201ENST00000295911 WASF1Q92558 559 aa10.77□□□□□ -0.68
CLRN1-201ENST00000295911 BRIP1Q9BX63 1249 aa10.77□□□□□ -0.68
CLRN1-201ENST00000295911 TNMDQ9H2S6 317 aa10.77□□□□□ -0.68
CLRN1-201ENST00000295911 CLSTN2Q9H4D0 955 aa10.77□□□□□ -0.68
CLRN1-201ENST00000295911 RTEL1Q9NZ71 1219 aa10.77□□□□□ -0.68
CLRN1-201ENST00000295911 LEMD3Q9Y2U8 911 aa10.77□□□□□ -0.68
CLRN1-201ENST00000295911 SLC12A7Q9Y666 1083 aa10.77□□□□□ -0.68
CLRN1-201ENST00000295911 NEDD4P46934 1319 aa10.77□□□□□ -0.69
CLRN1-201ENST00000295911 STK36Q9NRP7 1315 aa10.77□□□□□ -0.69
CLRN1-201ENST00000295911 TNRC6CQ9HCJ0 1690 aaKnown RBP10.77□□□□□ -0.69
CLRN1-201ENST00000295911 CCDC196A0A1B0GTZ2 297 aa10.76□□□□□ -0.69
CLRN1-201ENST00000295911 PRKAB2O43741 272 aa10.76□□□□□ -0.69
CLRN1-201ENST00000295911 KDM4AO75164 1064 aa10.76□□□□□ -0.69
CLRN1-201ENST00000295911 CAVIN2O95810 425 aa10.76□□□□□ -0.69
CLRN1-201ENST00000295911 LIG1P18858 919 aa10.76□□□□□ -0.69
CLRN1-201ENST00000295911 PTGER2P43116 358 aa10.76□□□□□ -0.69
CLRN1-201ENST00000295911 PSEN2P49810 448 aa10.76□□□□□ -0.69
CLRN1-201ENST00000295911 NT5C2P49902 561 aa10.76□□□□□ -0.69
CLRN1-201ENST00000295911 PPARAQ07869 468 aa10.76□□□□□ -0.69
CLRN1-201ENST00000295911 FAM182BQ5T319 152 aa10.76□□□□□ -0.69
CLRN1-201ENST00000295911 RBM43Q6ZSC3 357 aaKnown RBP10.76□□□□□ -0.69
CLRN1-201ENST00000295911 MIGA1Q8NAN2 632 aa10.76□□□□□ -0.69
CLRN1-201ENST00000295911 RNF214Q8ND24 703 aa10.76□□□□□ -0.69
CLRN1-201ENST00000295911 ESR2Q92731 530 aa10.76□□□□□ -0.69
CLRN1-201ENST00000295911 DDX27Q96GQ7 796 aaKnown RBP10.76□□□□□ -0.69
CLRN1-201ENST00000295911 PGBD1Q96JS3 809 aa10.76□□□□□ -0.69
CLRN1-201ENST00000295911 DACT1Q9NYF0 836 aa10.76□□□□□ -0.69
CLRN1-201ENST00000295911 CCDC39Q9UFE4 941 aa10.76□□□□□ -0.69
CLRN1-201ENST00000295911 IQSEC3Q9UPP2 1182 aaPredicted RBP10.76□□□□□ -0.69
CLRN1-201ENST00000295911 COL1A1P02452 1464 aaPredicted RBP10.76□□□□□ -0.69
CLRN1-201ENST00000295911 GOLGA8AA7E2F4 631 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 YEATS4O95619 227 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 CLCN1P35523 988 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 IARSP41252 1262 aaKnown RBP10.75□□□□□ -0.69
CLRN1-201ENST00000295911 FOSBP53539 338 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 GUCY1B3Q02153 619 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 SSRP1Q08945 709 aaKnown RBP10.75□□□□□ -0.69
CLRN1-201ENST00000295911 GRAPQ13588 217 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 TRIM29Q14134 588 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 MFSD10Q14728 455 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 NFIXQ14938 502 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 WTAPQ15007 396 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 CCDC73Q6ZRK6 1079 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 SMIM5Q71RC9 77 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 ZSCAN30Q86W11 494 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 CNBD1Q8NA66 436 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 GRAPLQ8TC17 118 aaPredicted RBP10.75□□□□□ -0.69
CLRN1-201ENST00000295911 KCNG4Q8TDN1 519 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 RIOK1Q9BRS2 568 aaKnown RBP10.75□□□□□ -0.69
CLRN1-201ENST00000295911 RRAGDQ9NQL2 400 aaPredicted RBP10.75□□□□□ -0.69
CLRN1-201ENST00000295911 DUOX1Q9NRD9 1551 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 A0A1W2PQ27 194 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 A0A1W2PQ64 194 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 A0A1W2PQD8 194 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 SLC3A2P08195 630 aaKnown RBP10.75□□□□□ -0.69
CLRN1-201ENST00000295911 HSPA1LP34931 641 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 PPP4R3BQ5MIZ7 849 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 DMRTA1Q5VZB9 504 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 C15orf52Q6ZUT6 534 aaKnown RBP10.75□□□□□ -0.69
CLRN1-201ENST00000295911 CCAR1Q8IX12 1150 aaKnown RBP10.75□□□□□ -0.69
CLRN1-201ENST00000295911 WDR66Q8TBY9 1149 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 NSUN4Q96CB9 384 aaKnown RBP10.75□□□□□ -0.69
CLRN1-201ENST00000295911 USP28Q96RU2 1077 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 UBAC1Q9BSL1 405 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 ALG1Q9BT22 464 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 CRNKL1Q9BZJ0 848 aaKnown RBP10.75□□□□□ -0.69
CLRN1-201ENST00000295911 QTRT2Q9H974 415 aaKnown RBP10.75□□□□□ -0.69
CLRN1-201ENST00000295911 TOMM22Q9NS69 142 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms