RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 SETDB1Q15047 1291 aa15.22■□□□□ 0.03
KCNIP3-201ENST00000295225 CCDC24Q8N4L8 307 aa15.22■□□□□ 0.03
KCNIP3-201ENST00000295225 CPLX3Q8WVH0 158 aa15.22■□□□□ 0.03
KCNIP3-201ENST00000295225 ACSBG1Q96GR2 724 aa15.22■□□□□ 0.03
KCNIP3-201ENST00000295225 ABCF2Q9UG63 623 aa15.22■□□□□ 0.03
KCNIP3-201ENST00000295225 PAXBP1Q9Y5B6 917 aa15.22■□□□□ 0.03
KCNIP3-201ENST00000295225 ERICH4A6NGS2 130 aa15.22■□□□□ 0.03
KCNIP3-201ENST00000295225 SH2B2O14492 632 aaPredicted RBP15.22■□□□□ 0.03
KCNIP3-201ENST00000295225 SLC39A14Q15043 492 aa15.22■□□□□ 0.03
KCNIP3-201ENST00000295225 ZNF771Q7L3S4 317 aaPredicted RBP15.22■□□□□ 0.03
KCNIP3-201ENST00000295225 CNNM3Q8NE01 707 aa15.22■□□□□ 0.03
KCNIP3-201ENST00000295225 KIF18AQ8NI77 898 aa15.22■□□□□ 0.03
KCNIP3-201ENST00000295225 IRX2Q9BZI1 471 aaPredicted RBP15.22■□□□□ 0.03
KCNIP3-201ENST00000295225 ANKRD18BA2A2Z9 1011 aa15.21■□□□□ 0.03
KCNIP3-201ENST00000295225 DHX16O60231 1041 aaKnown RBP15.21■□□□□ 0.03
KCNIP3-201ENST00000295225 LCORLQ8N3X6 602 aa15.21■□□□□ 0.03
KCNIP3-201ENST00000295225 TRIM34Q9BYJ4 488 aa15.21■□□□□ 0.03
KCNIP3-201ENST00000295225 BTG4Q9NY30 223 aa15.21■□□□□ 0.03
KCNIP3-201ENST00000295225 PCDHB6Q9Y5E3 794 aa15.21■□□□□ 0.03
KCNIP3-201ENST00000295225 POLR2DO15514 142 aaKnown RBP15.21■□□□□ 0.03
KCNIP3-201ENST00000295225 CTSWP56202 376 aa15.21■□□□□ 0.03
KCNIP3-201ENST00000295225 FMR1Q06787 632 aaKnown RBP eCLIP15.21■□□□□ 0.03
KCNIP3-201ENST00000295225 RASGRF1Q13972 1273 aa15.21■□□□□ 0.03
KCNIP3-201ENST00000295225 IGDCC4Q8TDY8 1250 aa15.21■□□□□ 0.03
KCNIP3-201ENST00000295225 ARHGEF1Q92888 912 aaKnown RBP15.21■□□□□ 0.03
KCNIP3-201ENST00000295225 NAPBQ9H115 298 aa15.21■□□□□ 0.03
KCNIP3-201ENST00000295225 LY9Q9HBG7 655 aa15.21■□□□□ 0.03
KCNIP3-201ENST00000295225 ERVV-2B6SEH9 535 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 TFRCP02786 760 aaKnown RBP15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 PCCAP05165 728 aaPredicted RBP15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 AFMP43652 599 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 PTPAQ15257 358 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 ZNF446Q9NWS9 450 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 SLC12A7Q9Y666 1083 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 RIC1Q4ADV7 1423 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 RFX7Q2KHR2 1363 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 A0A1W2PQ27 194 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 A0A1W2PQ64 194 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 A0A1W2PQD8 194 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 WNT7AO00755 349 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 URI1O94763 535 aaPredicted RBP15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 PDE8BO95263 885 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 YEATS4O95619 227 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 CMA1P23946 247 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 TDO2P48775 406 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 TOB1P50616 345 aaPredicted RBP15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 MTF1Q14872 753 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 NTRK3Q16288 839 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 IFNL3Q8IZI9 196 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 STRBPQ96SI9 672 aaKnown RBP15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 MAP3K14Q99558 947 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 INTS13Q9NVM9 706 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 SERTAD1Q9UHV2 236 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 KCNH3Q9ULD8 1083 aa15.2■□□□□ 0.02
KCNIP3-201ENST00000295225 GLI3P10071 1580 aa15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 ADAMTS7Q9UKP4 1686 aa15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 ZMYM6O95789 1325 aa15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 SEC31AO94979 1220 aaKnown RBP15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 EVCP57679 992 aa15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 KARSQ15046 597 aaKnown RBP15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 EARS2Q5JPH6 523 aaKnown RBP15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 ADGRA1Q86SQ6 560 aa15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 ITFG2Q969R8 447 aa15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 SAMSN1Q9NSI8 373 aaKnown RBP15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 MYH15Q9Y2K3 1946 aa15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 TJP1Q07157 1748 aa15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 CSF1RP07333 972 aa15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 GIGYF2Q6Y7W6 1299 aaKnown RBP15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 SLC51AQ86UW1 340 aa15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 DIS3L2Q8IYB7 885 aaKnown RBP15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 CABP5Q9NP86 173 aa15.19■□□□□ 0.02
KCNIP3-201ENST00000295225 ZFYP08048 801 aaPredicted RBP15.18■□□□□ 0.02
KCNIP3-201ENST00000295225 TRIM29Q14134 588 aa15.18■□□□□ 0.02
KCNIP3-201ENST00000295225 BRAPQ7Z569 592 aa15.18■□□□□ 0.02
KCNIP3-201ENST00000295225 CALR3Q96L12 384 aaKnown RBP15.18■□□□□ 0.02
KCNIP3-201ENST00000295225 NCAPGQ9BPX3 1015 aa15.18■□□□□ 0.02
KCNIP3-201ENST00000295225 SLC4A4Q9Y6R1 1079 aa15.18■□□□□ 0.02
KCNIP3-201ENST00000295225 VPS54Q9P1Q0 977 aa15.18■□□□□ 0.02
KCNIP3-201ENST00000295225 SLU7O95391 586 aaKnown RBP15.17■□□□□ 0.02
KCNIP3-201ENST00000295225 CAVIN2O95810 425 aa15.17■□□□□ 0.02
KCNIP3-201ENST00000295225 DZIP3Q86Y13 1208 aaKnown RBP15.17■□□□□ 0.02
KCNIP3-201ENST00000295225 SPATA5Q8NB90 893 aa15.17■□□□□ 0.02
KCNIP3-201ENST00000295225 KCPQ6ZWJ8 1503 aa15.17■□□□□ 0.02
KCNIP3-201ENST00000295225 MAP3K15Q6ZN16 1313 aa15.17■□□□□ 0.02
KCNIP3-201ENST00000295225 ARHGAP29Q52LW3 1261 aa15.17■□□□□ 0.02
KCNIP3-201ENST00000295225 VGLL2Q8N8G2 317 aa15.17■□□□□ 0.02
KCNIP3-201ENST00000295225 SHISA4Q96DD7 197 aa15.17■□□□□ 0.02
KCNIP3-201ENST00000295225 EEF2KMTQ96G04 330 aa15.17■□□□□ 0.02
KCNIP3-201ENST00000295225 EPSTI1Q96J88 318 aa15.17■□□□□ 0.02
KCNIP3-201ENST00000295225 CARD6Q9BX69 1037 aa15.17■□□□□ 0.02
KCNIP3-201ENST00000295225 OSBPL5Q9H0X9 879 aaPredicted RBP15.17■□□□□ 0.02
KCNIP3-201ENST00000295225 DDX41Q9UJV9 622 aaKnown RBP15.17■□□□□ 0.02
KCNIP3-201ENST00000295225 CPDO75976 1380 aa15.17■□□□□ 0.02
KCNIP3-201ENST00000295225 ADAMTS3O15072 1205 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 STARD3NLO95772 234 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 CDC25AP30304 524 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 TOGARAM2Q6ZUX3 1019 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 TRERF1Q96PN7 1200 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms