RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 PDS5AQ29RF7 1337 aaKnown RBP16.22■□□□□ 0.19
NXF1-201ENST00000294172 A0A087WWV3 80 aa16.22■□□□□ 0.19
NXF1-201ENST00000294172 PRR5LQ6MZQ0 368 aa16.22■□□□□ 0.19
NXF1-201ENST00000294172 RGS22Q8NE09 1264 aa16.22■□□□□ 0.19
NXF1-201ENST00000294172 GPR101Q96P66 508 aaPredicted RBP16.22■□□□□ 0.19
NXF1-201ENST00000294172 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.22■□□□□ 0.19
NXF1-201ENST00000294172 KCNJ14Q9UNX9 436 aa16.22■□□□□ 0.19
NXF1-201ENST00000294172 LY75O60449 1722 aa16.21■□□□□ 0.19
NXF1-201ENST00000294172 BAZ2AQ9UIF9 1905 aaKnown RBP16.21■□□□□ 0.19
NXF1-201ENST00000294172 SEC23AQ15436 765 aa16.21■□□□□ 0.19
NXF1-201ENST00000294172 SLC4A8Q2Y0W8 1093 aa16.21■□□□□ 0.19
NXF1-201ENST00000294172 CRACR2BQ8N4Y2 399 aaPredicted RBP16.21■□□□□ 0.19
NXF1-201ENST00000294172 ENAHQ8N8S7 591 aaPredicted RBP16.21■□□□□ 0.19
NXF1-201ENST00000294172 SPC24Q8NBT2 197 aa16.21■□□□□ 0.19
NXF1-201ENST00000294172 CERKQ8TCT0 537 aa16.21■□□□□ 0.19
NXF1-201ENST00000294172 RPGRQ92834 1020 aaKnown RBP16.21■□□□□ 0.19
NXF1-201ENST00000294172 FBXW7Q969H0 707 aa16.21■□□□□ 0.19
NXF1-201ENST00000294172 QTRT2Q9H974 415 aaKnown RBP16.21■□□□□ 0.19
NXF1-201ENST00000294172 TNRC6CQ9HCJ0 1690 aaKnown RBP16.21■□□□□ 0.19
NXF1-201ENST00000294172 ADRA2BP18089 450 aa16.2■□□□□ 0.18
NXF1-201ENST00000294172 SLC39A14Q15043 492 aa16.2■□□□□ 0.18
NXF1-201ENST00000294172 IFIT1BQ5T764 474 aaKnown RBP16.2■□□□□ 0.18
NXF1-201ENST00000294172 IQCA1Q86XH1 822 aa16.2■□□□□ 0.18
NXF1-201ENST00000294172 DCP1AQ9NPI6 582 aaPredicted RBP16.2■□□□□ 0.18
NXF1-201ENST00000294172 ZNF500O60304 480 aaPredicted RBP16.2■□□□□ 0.18
NXF1-201ENST00000294172 WDHD1O75717 1129 aaPredicted RBP16.2■□□□□ 0.18
NXF1-201ENST00000294172 U2AF2P26368 475 aaKnown RBP eCLIP16.2■□□□□ 0.185e-10■■■□□ 17.1
NXF1-201ENST00000294172 SAFBQ15424 915 aaKnown RBP eCLIP16.2■□□□□ 0.18
NXF1-201ENST00000294172 STX1AQ16623 288 aa16.2■□□□□ 0.18
NXF1-201ENST00000294172 NBPF11Q86T75 865 aa16.2■□□□□ 0.18
NXF1-201ENST00000294172 TTC12Q9H892 705 aaPredicted RBP16.2■□□□□ 0.18
NXF1-201ENST00000294172 SBF2Q86WG5 1849 aa16.2■□□□□ 0.18
NXF1-201ENST00000294172 NID2Q14112 1375 aa16.2■□□□□ 0.18
NXF1-201ENST00000294172 IRS2Q9Y4H2 1338 aa16.19■□□□□ 0.18
NXF1-201ENST00000294172 BTBD18B2RXH4 712 aa16.19■□□□□ 0.18
NXF1-201ENST00000294172 CYP2D6P10635 497 aa16.19■□□□□ 0.18
NXF1-201ENST00000294172 GYS1P13807 737 aa16.19■□□□□ 0.18
NXF1-201ENST00000294172 SPTY2D1Q68D10 685 aaPredicted RBP16.19■□□□□ 0.18
NXF1-201ENST00000294172 C11orf57Q6ZUT1 292 aaPredicted RBP16.19■□□□□ 0.18
NXF1-201ENST00000294172 LEMD3Q9Y2U8 911 aa16.19■□□□□ 0.18
NXF1-201ENST00000294172 XDHP47989 1333 aa16.19■□□□□ 0.18
NXF1-201ENST00000294172 DEXIO95424 95 aa16.19■□□□□ 0.18
NXF1-201ENST00000294172 AXDND1Q5T1B0 1012 aaPredicted RBP16.19■□□□□ 0.18
NXF1-201ENST00000294172 CATIPQ7Z7H3 387 aa16.19■□□□□ 0.18
NXF1-201ENST00000294172 DIS3L2Q8IYB7 885 aaKnown RBP16.19■□□□□ 0.18
NXF1-201ENST00000294172 TRIM37O94972 964 aa16.18■□□□□ 0.18
NXF1-201ENST00000294172 CAVIN2O95810 425 aa16.18■□□□□ 0.18
NXF1-201ENST00000294172 MMP1P03956 469 aa16.18■□□□□ 0.18
NXF1-201ENST00000294172 SERPINB2P05120 415 aa16.18■□□□□ 0.18
NXF1-201ENST00000294172 LDHBP07195 334 aaKnown RBP16.18■□□□□ 0.18
NXF1-201ENST00000294172 ST5P78524 1137 aa16.18■□□□□ 0.18
NXF1-201ENST00000294172 FAM47AQ5JRC9 791 aa16.18■□□□□ 0.18
NXF1-201ENST00000294172 NOSTRINQ8IVI9 506 aa16.18■□□□□ 0.18
NXF1-201ENST00000294172 ATP8A2Q9NTI2 1148 aa16.18■□□□□ 0.18
NXF1-201ENST00000294172 MYH13Q9UKX3 1938 aa16.18■□□□□ 0.18
NXF1-201ENST00000294172 PFKFB1P16118 471 aa16.18■□□□□ 0.18
NXF1-201ENST00000294172 CMA1P23946 247 aa16.18■□□□□ 0.18
NXF1-201ENST00000294172 RCAN1P53805 252 aa16.18■□□□□ 0.18
NXF1-201ENST00000294172 GPSM2P81274 684 aa16.18■□□□□ 0.18
NXF1-201ENST00000294172 AKAP17AQ02040 695 aaKnown RBP16.18■□□□□ 0.18
NXF1-201ENST00000294172 JMYQ8N9B5 988 aa16.18■□□□□ 0.18
NXF1-201ENST00000294172 TDRD7Q8NHU6 1098 aaKnown RBP16.18■□□□□ 0.18
NXF1-201ENST00000294172 MAP3K14Q99558 947 aa16.18■□□□□ 0.18
NXF1-201ENST00000294172 TRIM5Q9C035 493 aa16.18■□□□□ 0.18
NXF1-201ENST00000294172 MCM9Q9NXL9 1143 aa16.18■□□□□ 0.18
NXF1-201ENST00000294172 MYH2Q9UKX2 1941 aa16.17■□□□□ 0.18
NXF1-201ENST00000294172 hCG_1642624A0A1W2PR95 340 aa16.17■□□□□ 0.18
NXF1-201ENST00000294172 GOLGA6L19H0YKK7 550 aa16.17■□□□□ 0.18
NXF1-201ENST00000294172 NMT2O60551 498 aa16.17■□□□□ 0.18
NXF1-201ENST00000294172 ZNF202O95125 648 aa16.17■□□□□ 0.18
NXF1-201ENST00000294172 SLC3A2P08195 630 aaKnown RBP16.17■□□□□ 0.18
NXF1-201ENST00000294172 PCP11498 1178 aaKnown RBP16.17■□□□□ 0.18
NXF1-201ENST00000294172 ZNF804AQ7Z570 1209 aa16.17■□□□□ 0.18
NXF1-201ENST00000294172 WDR66Q8TBY9 1149 aa16.17■□□□□ 0.18
NXF1-201ENST00000294172 ANO10Q9NW15 660 aa16.17■□□□□ 0.18
NXF1-201ENST00000294172 MROH7-TTC4A0A0A0MT08 1334 aa16.17■□□□□ 0.18
NXF1-201ENST00000294172 FGRP09769 529 aa16.17■□□□□ 0.18
NXF1-201ENST00000294172 KIAA2012Q0VF49 1180 aa16.17■□□□□ 0.18
NXF1-201ENST00000294172 PTPAQ15257 358 aa16.17■□□□□ 0.18
NXF1-201ENST00000294172 DIXDC1Q155Q3 683 aa16.17■□□□□ 0.18
NXF1-201ENST00000294172 DUOX1Q9NRD9 1551 aa16.16■□□□□ 0.18
NXF1-201ENST00000294172 UFL1O94874 794 aa16.16■□□□□ 0.18
NXF1-201ENST00000294172 ZRSR1Q15695 479 aaKnown RBP16.16■□□□□ 0.18
NXF1-201ENST00000294172 GRIK5Q16478 980 aa16.16■□□□□ 0.18
NXF1-201ENST00000294172 DRC7Q8IY82 874 aa16.16■□□□□ 0.18
NXF1-201ENST00000294172 CLIC6Q96NY7 704 aa16.16■□□□□ 0.18
NXF1-201ENST00000294172 ARPP21Q9UBL0 812 aaPredicted RBP16.16■□□□□ 0.18
NXF1-201ENST00000294172 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.16■□□□□ 0.18
NXF1-201ENST00000294172 ECM29Q5VYK3 1845 aa16.16■□□□□ 0.18
NXF1-201ENST00000294172 BECN2A8MW95 431 aa16.16■□□□□ 0.18
NXF1-201ENST00000294172 PPP6R2O75170 966 aa16.16■□□□□ 0.18
NXF1-201ENST00000294172 OFD1O75665 1012 aa16.16■□□□□ 0.18
NXF1-201ENST00000294172 PLEKHA8P1O95397 391 aa16.16■□□□□ 0.18
NXF1-201ENST00000294172 USP17L8P0C7I0 530 aa16.16■□□□□ 0.18
NXF1-201ENST00000294172 USP5P45974 858 aa16.16■□□□□ 0.18
NXF1-201ENST00000294172 NR5A1Q13285 461 aa16.16■□□□□ 0.18
NXF1-201ENST00000294172 IQCB1Q15051 598 aa16.16■□□□□ 0.18
NXF1-201ENST00000294172 ORC4O43929 436 aa16.15■□□□□ 0.18
NXF1-201ENST00000294172 PDE4BQ07343 736 aa16.15■□□□□ 0.18
NXF1-201ENST00000294172 PPP2R5BQ15173 497 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms