RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 MAP3K14Q99558 947 aa16.77■□□□□ 0.28
CCNF-201ENST00000293968 PDE11AQ9HCR9 933 aa16.77■□□□□ 0.28
CCNF-201ENST00000293968 UBN2Q6ZU65 1347 aa16.77■□□□□ 0.28
CCNF-201ENST00000293968 HSP90B2PQ58FF3 399 aa16.77■□□□□ 0.27
CCNF-201ENST00000293968 KIF6Q6ZMV9 814 aa16.77■□□□□ 0.27
CCNF-201ENST00000293968 MLKLQ8NB16 471 aa16.77■□□□□ 0.27
CCNF-201ENST00000293968 TFRCP02786 760 aaKnown RBP16.77■□□□□ 0.27
CCNF-201ENST00000293968 TXLNAP40222 546 aa16.77■□□□□ 0.27
CCNF-201ENST00000293968 RBL2Q08999 1139 aa16.77■□□□□ 0.27
CCNF-201ENST00000293968 RTN1Q16799 776 aa16.77■□□□□ 0.27
CCNF-201ENST00000293968 RABGGTAQ92696 567 aa16.77■□□□□ 0.27
CCNF-201ENST00000293968 PIH1D3Q9NQM4 214 aaKnown RBP16.77■□□□□ 0.27
CCNF-201ENST00000293968 WWC3Q9ULE0 1092 aa16.77■□□□□ 0.27
CCNF-201ENST00000293968 SART3Q15020 963 aaKnown RBP16.76■□□□□ 0.27
CCNF-201ENST00000293968 ARMT1Q9H993 441 aa16.76■□□□□ 0.27
CCNF-201ENST00000293968 CWC15Q9P013 229 aaKnown RBP16.76■□□□□ 0.27
CCNF-201ENST00000293968 WASF1Q92558 559 aa16.76■□□□□ 0.27
CCNF-201ENST00000293968 MBD4O95243 580 aa16.76■□□□□ 0.27
CCNF-201ENST00000293968 OVOS2A0A0G2JMS6 1433 aa16.76■□□□□ 0.27
CCNF-201ENST00000293968 CAPN2P17655 700 aa16.75■□□□□ 0.27
CCNF-201ENST00000293968 ITGA6P23229 1130 aa16.75■□□□□ 0.27
CCNF-201ENST00000293968 MFSD6Q6ZSS7 791 aa16.75■□□□□ 0.27
CCNF-201ENST00000293968 TMEM139Q8IV31 216 aa16.75■□□□□ 0.27
CCNF-201ENST00000293968 MAGEB6Q8N7X4 407 aa16.75■□□□□ 0.27
CCNF-201ENST00000293968 ERLIN1O75477 346 aa16.75■□□□□ 0.27
CCNF-201ENST00000293968 PLCD3Q8N3E9 789 aa16.75■□□□□ 0.27
CCNF-201ENST00000293968 MINDY4BA8MYZ0 360 aa16.75■□□□□ 0.27
CCNF-201ENST00000293968 ADD2P35612 726 aa16.75■□□□□ 0.27
CCNF-201ENST00000293968 TMEM87BQ96K49 555 aa16.75■□□□□ 0.27
CCNF-201ENST00000293968 NUP88Q99567 741 aaPredicted RBP16.75■□□□□ 0.27
CCNF-201ENST00000293968 NBPF3Q9H094 633 aa16.75■□□□□ 0.27
CCNF-201ENST00000293968 CSRNP2Q9H175 543 aa16.75■□□□□ 0.27
CCNF-201ENST00000293968 SUGCTQ9HAC7 445 aa16.75■□□□□ 0.27
CCNF-201ENST00000293968 ZSWIM5Q9P217 1185 aa16.75■□□□□ 0.27
CCNF-201ENST00000293968 MRC1P22897 1456 aa16.75■□□□□ 0.27
CCNF-201ENST00000293968 CDC5LQ99459 802 aaKnown RBP16.74■□□□□ 0.27
CCNF-201ENST00000293968 ADAM21Q9UKJ8 722 aa16.74■□□□□ 0.27
CCNF-201ENST00000293968 PDE6AP16499 860 aa16.74■□□□□ 0.27
CCNF-201ENST00000293968 PHKA1P46020 1223 aa16.74■□□□□ 0.27
CCNF-201ENST00000293968 WTAPQ15007 396 aa16.74■□□□□ 0.27
CCNF-201ENST00000293968 MIGA1Q8NAN2 632 aa16.74■□□□□ 0.27
CCNF-201ENST00000293968 ACRBPQ8NEB7 543 aa16.74■□□□□ 0.27
CCNF-201ENST00000293968 OXER1Q8TDS5 423 aa16.74■□□□□ 0.27
CCNF-201ENST00000293968 ARHGAP23Q9P227 1491 aa16.74■□□□□ 0.27
CCNF-201ENST00000293968 CPDO75976 1380 aa16.74■□□□□ 0.27
CCNF-201ENST00000293968 CTAGE9A4FU28 777 aa16.74■□□□□ 0.27
CCNF-201ENST00000293968 SNAP23O00161 211 aa16.74■□□□□ 0.27
CCNF-201ENST00000293968 N4BP3O15049 544 aa16.74■□□□□ 0.27
CCNF-201ENST00000293968 ATF3P18847 181 aa16.74■□□□□ 0.27
CCNF-201ENST00000293968 CASP14P31944 242 aa16.74■□□□□ 0.27
CCNF-201ENST00000293968 FAM193AP78312 1265 aa16.74■□□□□ 0.27
CCNF-201ENST00000293968 GREM2Q9H772 168 aa16.74■□□□□ 0.27
CCNF-201ENST00000293968 STRN4Q9NRL3 753 aa16.74■□□□□ 0.27
CCNF-201ENST00000293968 RASSF8Q8NHQ8 419 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 ENOX1Q8TC92 643 aaKnown RBP16.73■□□□□ 0.27
CCNF-201ENST00000293968 UBAC1Q9BSL1 405 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 LY9Q9HBG7 655 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 MAPK8IP1Q9UQF2 711 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 MEGF6O75095 1541 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 SYNRGQ9UMZ2 1314 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 ANKRD18BA2A2Z9 1011 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 EIF3JO75822 258 aaKnown RBP16.73■□□□□ 0.27
CCNF-201ENST00000293968 TTF1Q15361 905 aaPredicted RBP16.73■□□□□ 0.27
CCNF-201ENST00000293968 RAD9BQ6WBX8 426 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 GOLGA6L1Q8N7Z2 621 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 EPSTI1Q96J88 318 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 FUT8Q9BYC5 575 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 VPS16Q9H269 839 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 H3BQF6 201 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 PRKAB2O43741 272 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 RILPL1Q5EBL4 403 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 SRGAP1Q7Z6B7 1085 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 SLC35F6Q8N357 371 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 FBXL16Q8N461 479 aa16.73■□□□□ 0.27
CCNF-201ENST00000293968 IQSEC3Q9UPP2 1182 aaPredicted RBP16.73■□□□□ 0.27
CCNF-201ENST00000293968 LMO7Q8WWI1 1683 aa16.72■□□□□ 0.27
CCNF-201ENST00000293968 TCIRG1Q13488 830 aa16.72■□□□□ 0.27
CCNF-201ENST00000293968 ZCRB1Q8TBF4 217 aaKnown RBP16.72■□□□□ 0.27
CCNF-201ENST00000293968 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.72■□□□□ 0.27
CCNF-201ENST00000293968 CTNND2Q9UQB3 1225 aa16.72■□□□□ 0.27
CCNF-201ENST00000293968 ATP8B1O43520 1251 aa16.72■□□□□ 0.27
CCNF-201ENST00000293968 MMP1P03956 469 aa16.72■□□□□ 0.27
CCNF-201ENST00000293968 PLCD1P51178 756 aa16.72■□□□□ 0.27
CCNF-201ENST00000293968 CEP112Q8N8E3 955 aa16.72■□□□□ 0.27
CCNF-201ENST00000293968 KIFC2Q96AC6 838 aa16.72■□□□□ 0.27
CCNF-201ENST00000293968 TEX13AQ9BXU3 409 aaPredicted RBP16.72■□□□□ 0.27
CCNF-201ENST00000293968 BLZF1Q9H2G9 400 aa16.72■□□□□ 0.27
CCNF-201ENST00000293968 CEP131Q9UPN4 1083 aa16.72■□□□□ 0.27
CCNF-201ENST00000293968 CTAGE15A4D2H0 777 aa16.72■□□□□ 0.27
CCNF-201ENST00000293968 PRDM1O75626 825 aa16.72■□□□□ 0.27
CCNF-201ENST00000293968 CTAGE8P0CG41 777 aa16.72■□□□□ 0.27
CCNF-201ENST00000293968 CTAGE6Q86UF2 777 aa16.72■□□□□ 0.27
CCNF-201ENST00000293968 CTAGE4Q8IX94 777 aa16.72■□□□□ 0.27
CCNF-201ENST00000293968 IGDCC4Q8TDY8 1250 aa16.72■□□□□ 0.27
CCNF-201ENST00000293968 VPS54Q9P1Q0 977 aa16.72■□□□□ 0.27
CCNF-201ENST00000293968 TRMT112Q9UI30 125 aaKnown RBP16.72■□□□□ 0.27
CCNF-201ENST00000293968 FAM205CA6NFA0 338 aa16.71■□□□□ 0.27
CCNF-201ENST00000293968 MYO1BO43795 1136 aa16.71■□□□□ 0.27
CCNF-201ENST00000293968 TOB1P50616 345 aaPredicted RBP16.71■□□□□ 0.27
CCNF-201ENST00000293968 HDXQ7Z353 690 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms