RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 RPAINQ86UA6 219 aa12.02□□□□□ -0.49
PKNOX1-201ENST00000291547 VPS52Q8N1B4 723 aa12.02□□□□□ -0.49
PKNOX1-201ENST00000291547 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.02□□□□□ -0.49
PKNOX1-201ENST00000291547 ARHGAP45Q92619 1136 aa12.02□□□□□ -0.49
PKNOX1-201ENST00000291547 C6orf50Q9HD87 102 aa12.02□□□□□ -0.49
PKNOX1-201ENST00000291547 ACTN4O43707 911 aaKnown RBP12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 CALML3P27482 149 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 GAS2L3Q86XJ1 694 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 IGSF22Q8N9C0 903 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 GOLGA5Q8TBA6 731 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 USP6P35125 1406 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 PTPDC1A2A3K4 754 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 ERCC3P19447 782 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 C16orf71Q8IYS4 520 aaPredicted RBP12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 MRRFQ96E11 262 aaKnown RBP12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 ZNF219Q9P2Y4 722 aaPredicted RBP12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 NRXN1Q9ULB1 1477 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 A0A1B0GVL5 298 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 INTS4Q96HW7 963 aaKnown RBP12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 NEURL4Q96JN8 1562 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 FER1L4A9Z1Z3 1794 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 PPARDQ03181 441 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 TBC1D8BQ0IIM8 1120 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 TRAF1Q13077 416 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 ZSCAN26Q16670 478 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 BRAPQ7Z569 592 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 EPSTI1Q96J88 318 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 VCXQ9H320 206 aa12.01□□□□□ -0.49
PKNOX1-201ENST00000291547 TTC36A6NLP5 189 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 ERCC5P28715 1186 aaPredicted RBP12□□□□□ -0.49
PKNOX1-201ENST00000291547 CHST3Q7LGC8 479 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 PLIN2Q99541 437 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 PFDN4Q9NQP4 134 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 BAIAP2L1Q9UHR4 511 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 ZNF335Q9H4Z2 1342 aaPredicted RBP12□□□□□ -0.49
PKNOX1-201ENST00000291547 GOLGA6BA6NDN3 693 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 EXOC5O00471 708 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 SPOPO43791 374 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 SH3BP5O60239 455 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 APOBRQ0VD83 1088 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 NMIQ13287 307 aaPredicted RBP12□□□□□ -0.49
PKNOX1-201ENST00000291547 TUBB2AQ13885 445 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 GEN1Q17RS7 908 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 AKNAD1Q5T1N1 836 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 RUFY4Q6ZNE9 571 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12□□□□□ -0.49
PKNOX1-201ENST00000291547 C17orf53Q8N3J3 647 aaPredicted RBP12□□□□□ -0.49
PKNOX1-201ENST00000291547 PHACTR3Q96KR7 559 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 TUBB2BQ9BVA1 445 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 TTF2Q9UNY4 1162 aaKnown RBP12□□□□□ -0.49
PKNOX1-201ENST00000291547 TACC3Q9Y6A5 838 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 KIAA1210Q9ULL0 1709 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 ANKARQ7Z5J8 1434 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 TXNDC9O14530 226 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 CALM1P0DP23 149 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 CALM2P0DP24 149 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 CALM3P0DP25 149 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 PDE1CQ14123 709 aaPredicted RBP12□□□□□ -0.49
PKNOX1-201ENST00000291547 MTHFSDQ2M296 383 aaKnown RBP12□□□□□ -0.49
PKNOX1-201ENST00000291547 SLC9C2Q5TAH2 1124 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 TNNI2P48788 182 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 ATP2B3Q16720 1220 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 MSANTD4Q8NCY6 345 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 MICAL1Q8TDZ2 1067 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 TRIM31Q9BZY9 425 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 JRKLQ9Y4A0 524 aa12□□□□□ -0.49
PKNOX1-201ENST00000291547 DCAF17Q5H9S7 520 aaPredicted RBP11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 DTHD1Q6ZMT9 781 aa11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 VPS16Q9H269 839 aa11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 IQSEC3Q9UPP2 1182 aaPredicted RBP11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 TMEM131LA2VDJ0 1609 aa11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 MROH2AA6NES4 1674 aa11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 IFT20Q8IY31 132 aa11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 SMARCC2Q8TAQ2 1214 aa11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 FAM212AQ96EL1 285 aa11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 CSRNP2Q9H175 543 aa11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 CEP170BQ9Y4F5 1589 aaPredicted RBP11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 OAS2P29728 719 aaKnown RBP11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 SF3A3Q12874 501 aaKnown RBP eCLIP11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 PPP1R21Q6ZMI0 780 aa11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 ANKRD13DQ6ZTN6 518 aa11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 CCDC170Q8IYT3 715 aa11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 KRT2P35908 639 aa11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 CCDC62Q6P9F0 684 aa11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 ZNF365Q70YC5 407 aa11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 ARHGAP24Q8N264 748 aa11.99□□□□□ -0.49
PKNOX1-201ENST00000291547 ADAMTS13Q76LX8 1427 aa11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 TRAF5O00463 557 aa11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 NOC4LQ9BVI4 516 aaKnown RBP11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 DLC1Q96QB1 1528 aa11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 ATP8B1O43520 1251 aa11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 AKAP4Q5JQC9 854 aa11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 CCT6BQ92526 530 aa11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 RPL13P26373 211 aaKnown RBP11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 ATP8B2P98198 1209 aa11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 TMCO4Q5TGY1 634 aa11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 CREB3L3Q68CJ9 461 aa11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 TACO1Q9BSH4 297 aaKnown RBP11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 ELP1O95163 1332 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms