RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 MIER1Q8N108 512 aa10.89□□□□□ -0.67
TFF1-201ENST00000291527 OSBPL5Q9H0X9 879 aaPredicted RBP10.89□□□□□ -0.67
TFF1-201ENST00000291527 RAI14Q9P0K7 980 aa10.89□□□□□ -0.67
TFF1-201ENST00000291527 CTNND1O60716 968 aaKnown RBP10.88□□□□□ -0.67
TFF1-201ENST00000291527 ZAP70P43403 619 aa10.88□□□□□ -0.67
TFF1-201ENST00000291527 EVX2Q03828 476 aa10.88□□□□□ -0.67
TFF1-201ENST00000291527 TRIM32Q13049 653 aa10.88□□□□□ -0.67
TFF1-201ENST00000291527 SPP2Q13103 211 aa10.88□□□□□ -0.67
TFF1-201ENST00000291527 TEX11Q8IYF3 940 aa10.88□□□□□ -0.67
TFF1-201ENST00000291527 ZGPATQ8N5A5 531 aaKnown RBP10.88□□□□□ -0.67
TFF1-201ENST00000291527 ANKRD13CQ8N6S4 541 aa10.88□□□□□ -0.67
TFF1-201ENST00000291527 RAET1EQ8TD07 263 aa10.88□□□□□ -0.67
TFF1-201ENST00000291527 CCDC8Q9H0W5 538 aaPredicted RBP10.88□□□□□ -0.67
TFF1-201ENST00000291527 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.88□□□□□ -0.67
TFF1-201ENST00000291527 PICK1Q9NRD5 415 aa10.88□□□□□ -0.67
TFF1-201ENST00000291527 AATFQ9NY61 560 aaKnown RBP eCLIP10.88□□□□□ -0.67
TFF1-201ENST00000291527 AKAP2Q9Y2D5 859 aa10.88□□□□□ -0.67
TFF1-201ENST00000291527 TBC1D12O60347 775 aa10.87□□□□□ -0.67
TFF1-201ENST00000291527 FLT3LGP49771 235 aa10.87□□□□□ -0.67
TFF1-201ENST00000291527 HMGCS2P54868 508 aa10.87□□□□□ -0.67
TFF1-201ENST00000291527 ATP8B2P98198 1209 aa10.87□□□□□ -0.67
TFF1-201ENST00000291527 G3BP1Q13283 466 aaKnown RBP eCLIP10.87□□□□□ -0.67
TFF1-201ENST00000291527 TNNI3KQ59H18 835 aa10.87□□□□□ -0.67
TFF1-201ENST00000291527 SPTY2D1Q68D10 685 aaPredicted RBP10.87□□□□□ -0.67
TFF1-201ENST00000291527 MAPKAPK5Q8IW41 473 aa10.87□□□□□ -0.67
TFF1-201ENST00000291527 SSH3Q8TE77 659 aa10.87□□□□□ -0.67
TFF1-201ENST00000291527 PARK7Q99497 189 aaKnown RBP10.87□□□□□ -0.67
TFF1-201ENST00000291527 SAP30BPQ9UHR5 308 aaKnown RBP10.87□□□□□ -0.67
TFF1-201ENST00000291527 FPGT-TNNI3KV9GXZ4 949 aa10.87□□□□□ -0.67
TFF1-201ENST00000291527 MAST2Q6P0Q8 1798 aa10.87□□□□□ -0.67
TFF1-201ENST00000291527 ZBTB7BO15156 539 aaPredicted RBP10.86□□□□□ -0.67
TFF1-201ENST00000291527 ADCY3O60266 1144 aa10.86□□□□□ -0.67
TFF1-201ENST00000291527 CAP2P40123 477 aa10.86□□□□□ -0.67
TFF1-201ENST00000291527 GJA8P48165 433 aa10.86□□□□□ -0.67
TFF1-201ENST00000291527 FCGRTP55899 365 aa10.86□□□□□ -0.67
TFF1-201ENST00000291527 ARHGEF6Q15052 776 aa10.86□□□□□ -0.67
TFF1-201ENST00000291527 GORABQ5T7V8 394 aa10.86□□□□□ -0.67
TFF1-201ENST00000291527 FASTKD5Q7L8L6 764 aaKnown RBP10.86□□□□□ -0.67
TFF1-201ENST00000291527 TGFBRAP1Q8WUH2 860 aa10.86□□□□□ -0.67
TFF1-201ENST00000291527 EAF2Q96CJ1 260 aaPredicted RBP10.86□□□□□ -0.67
TFF1-201ENST00000291527 RNF208Q9H0X6 261 aa10.86□□□□□ -0.67
TFF1-201ENST00000291527 ANTXR1Q9H6X2 564 aa10.86□□□□□ -0.67
TFF1-201ENST00000291527 LRP2BPQ9P2M1 347 aa10.86□□□□□ -0.67
TFF1-201ENST00000291527 BIN2Q9UBW5 565 aaPredicted RBP10.86□□□□□ -0.67
TFF1-201ENST00000291527 DBNLQ9UJU6 430 aaKnown RBP10.86□□□□□ -0.67
TFF1-201ENST00000291527 PALD1Q9ULE6 856 aa10.86□□□□□ -0.67
TFF1-201ENST00000291527 AGTPBP1Q9UPW5 1226 aa10.86□□□□□ -0.67
TFF1-201ENST00000291527 A0A0C4DFX4 3053 aa10.86□□□□□ -0.67
TFF1-201ENST00000291527 SURF6O75683 361 aaKnown RBP10.85□□□□□ -0.67
TFF1-201ENST00000291527 GDF11O95390 407 aa10.85□□□□□ -0.67
TFF1-201ENST00000291527 GNRH1P01148 92 aa10.85□□□□□ -0.67
TFF1-201ENST00000291527 INHAP05111 366 aa10.85□□□□□ -0.67
TFF1-201ENST00000291527 GJB1P08034 283 aa10.85□□□□□ -0.67
TFF1-201ENST00000291527 PRMT2P55345 433 aa10.85□□□□□ -0.67
TFF1-201ENST00000291527 CHRDL2Q6WN34 429 aa10.85□□□□□ -0.67
TFF1-201ENST00000291527 DIS3LQ8TF46 1054 aaKnown RBP10.85□□□□□ -0.67
TFF1-201ENST00000291527 ASCC2Q9H1I8 757 aaPredicted RBP10.85□□□□□ -0.67
TFF1-201ENST00000291527 TXNRD2Q9NNW7 524 aa10.85□□□□□ -0.67
TFF1-201ENST00000291527 GJD2Q9UKL4 321 aa10.85□□□□□ -0.67
TFF1-201ENST00000291527 TAOK2Q9UL54 1235 aa10.85□□□□□ -0.67
TFF1-201ENST00000291527 IPO8O15397 1037 aaKnown RBP10.84□□□□□ -0.67
TFF1-201ENST00000291527 NPM3O75607 178 aaKnown RBP10.84□□□□□ -0.67
TFF1-201ENST00000291527 Q3C1V9 767 aa10.84□□□□□ -0.67
TFF1-201ENST00000291527 SLFNL1Q499Z3 407 aa10.84□□□□□ -0.67
TFF1-201ENST00000291527 TTC39AQ5SRH9 613 aa10.84□□□□□ -0.67
TFF1-201ENST00000291527 ZKSCAN2Q63HK3 967 aa10.84□□□□□ -0.67
TFF1-201ENST00000291527 NAA16Q6N069 864 aaPredicted RBP10.84□□□□□ -0.67
TFF1-201ENST00000291527 SLF2Q8IX21 1173 aa10.84□□□□□ -0.67
TFF1-201ENST00000291527 MIGA1Q8NAN2 632 aa10.84□□□□□ -0.67
TFF1-201ENST00000291527 ZNF280CQ8ND82 737 aa10.84□□□□□ -0.67
TFF1-201ENST00000291527 PANK1Q8TE04 598 aa10.84□□□□□ -0.67
TFF1-201ENST00000291527 U2AF1L4Q8WU68 220 aaKnown RBP10.84□□□□□ -0.67
TFF1-201ENST00000291527 DPF3Q92784 378 aa10.84□□□□□ -0.67
TFF1-201ENST00000291527 P2RX7Q99572 595 aaKnown RBP10.84□□□□□ -0.67
TFF1-201ENST00000291527 RBM27Q9P2N5 1060 aaKnown RBP10.84□□□□□ -0.67
TFF1-201ENST00000291527 HDAC5Q9UQL6 1122 aa10.84□□□□□ -0.67
TFF1-201ENST00000291527 SLC45A1Q9Y2W3 748 aa10.84□□□□□ -0.67
TFF1-201ENST00000291527 FLT1P17948 1338 aa10.84□□□□□ -0.67
TFF1-201ENST00000291527 COL2A1P02458 1487 aaPredicted RBP10.83□□□□□ -0.68
TFF1-201ENST00000291527 USP17L5A8MUK1 530 aa10.83□□□□□ -0.68
TFF1-201ENST00000291527 SMIM22K7EJ46 135 aa10.83□□□□□ -0.68
TFF1-201ENST00000291527 TNPO2O14787 897 aaKnown RBP10.83□□□□□ -0.68
TFF1-201ENST00000291527 SGPL1O95470 568 aa10.83□□□□□ -0.68
TFF1-201ENST00000291527 CHGBP05060 677 aa10.83□□□□□ -0.68
TFF1-201ENST00000291527 LDHCP07864 332 aa10.83□□□□□ -0.68
TFF1-201ENST00000291527 UQCRFS1P1P0C7P4 283 aa10.83□□□□□ -0.68
TFF1-201ENST00000291527 HOXD10P28358 340 aa10.83□□□□□ -0.68
TFF1-201ENST00000291527 MNX1P50219 401 aaPredicted RBP10.83□□□□□ -0.68
TFF1-201ENST00000291527 PPP4CP60510 307 aa10.83□□□□□ -0.68
TFF1-201ENST00000291527 GSTO1P78417 241 aa10.83□□□□□ -0.68
TFF1-201ENST00000291527 HNRNPUQ00839 825 aaKnown RBP eCLIP10.83□□□□□ -0.68
TFF1-201ENST00000291527 MTMR2Q13614 643 aa10.83□□□□□ -0.68
TFF1-201ENST00000291527 DEFB118Q96PH6 123 aa10.83□□□□□ -0.68
TFF1-201ENST00000291527 GPR108Q9NPR9 543 aa10.83□□□□□ -0.68
TFF1-201ENST00000291527 EXOC6BQ9Y2D4 811 aa10.83□□□□□ -0.68
TFF1-201ENST00000291527 NOP58Q9Y2X3 529 aaKnown RBP10.83□□□□□ -0.68
TFF1-201ENST00000291527 CYP7A1P22680 504 aa10.82□□□□□ -0.68
TFF1-201ENST00000291527 OS9Q13438 667 aaPredicted RBP10.82□□□□□ -0.68
TFF1-201ENST00000291527 SH3D19Q5HYK7 790 aa10.82□□□□□ -0.68
TFF1-201ENST00000291527 CEP85Q6P2H3 762 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms