RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 PRRT2Q7Z6L0 340 aaPredicted RBP18.65■□□□□ 0.58
PDE6D-201ENST00000287600 SPATA5Q8NB90 893 aa18.65■□□□□ 0.58
PDE6D-201ENST00000287600 HMG20BQ9P0W2 317 aa18.65■□□□□ 0.58
PDE6D-201ENST00000287600 MAST2Q6P0Q8 1798 aa18.65■□□□□ 0.58
PDE6D-201ENST00000287600 GPR75-ASB3A0A0A6YYF3 556 aa18.64■□□□□ 0.57
PDE6D-201ENST00000287600 SLURP2P0DP57 97 aa18.64■□□□□ 0.57
PDE6D-201ENST00000287600 FCGRTP55899 365 aa18.64■□□□□ 0.57
PDE6D-201ENST00000287600 GSTO1P78417 241 aa18.64■□□□□ 0.57
PDE6D-201ENST00000287600 HSP90AB4PQ58FF6 505 aa18.64■□□□□ 0.57
PDE6D-201ENST00000287600 PI16Q6UXB8 463 aa18.64■□□□□ 0.57
PDE6D-201ENST00000287600 ERC1Q8IUD2 1116 aa18.64■□□□□ 0.57
PDE6D-201ENST00000287600 ATAD5Q96QE3 1844 aa18.63■□□□□ 0.57
PDE6D-201ENST00000287600 CTNND1O60716 968 aaKnown RBP18.63■□□□□ 0.57
PDE6D-201ENST00000287600 BCRP11274 1271 aa18.63■□□□□ 0.57
PDE6D-201ENST00000287600 GRK4P32298 578 aa18.63■□□□□ 0.57
PDE6D-201ENST00000287600 CRBNQ96SW2 442 aa18.63■□□□□ 0.57
PDE6D-201ENST00000287600 RAI14Q9P0K7 980 aa18.63■□□□□ 0.57
PDE6D-201ENST00000287600 AFG3L2Q9Y4W6 797 aa18.63■□□□□ 0.57
PDE6D-201ENST00000287600 TRIM75PA6NK02 468 aa18.62■□□□□ 0.57
PDE6D-201ENST00000287600 APBB1O00213 710 aa18.62■□□□□ 0.57
PDE6D-201ENST00000287600 LDHCP07864 332 aa18.62■□□□□ 0.57
PDE6D-201ENST00000287600 ARID4AP29374 1257 aaPredicted RBP18.62■□□□□ 0.57
PDE6D-201ENST00000287600 RHBDL3P58872 404 aa18.62■□□□□ 0.57
PDE6D-201ENST00000287600 MAP3K10Q02779 954 aa18.62■□□□□ 0.57
PDE6D-201ENST00000287600 PRKCZQ05513 592 aa18.62■□□□□ 0.57
PDE6D-201ENST00000287600 MTFR1Q15390 333 aa18.62■□□□□ 0.57
PDE6D-201ENST00000287600 HABP4Q5JVS0 413 aaKnown RBP18.62■□□□□ 0.57
PDE6D-201ENST00000287600 TBC1D9Q6ZT07 1266 aa18.62■□□□□ 0.57
PDE6D-201ENST00000287600 SMCR8Q8TEV9 937 aaPredicted RBP18.62■□□□□ 0.57
PDE6D-201ENST00000287600 ZNF384Q8TF68 577 aa18.62■□□□□ 0.57
PDE6D-201ENST00000287600 NSUN4Q96CB9 384 aaKnown RBP18.62■□□□□ 0.57
PDE6D-201ENST00000287600 EAF2Q96CJ1 260 aaPredicted RBP18.62■□□□□ 0.57
PDE6D-201ENST00000287600 DBNDD2Q9BQY9 259 aa18.62■□□□□ 0.57
PDE6D-201ENST00000287600 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.62■□□□□ 0.57
PDE6D-201ENST00000287600 COL2A1P02458 1487 aaPredicted RBP18.61■□□□□ 0.57
PDE6D-201ENST00000287600 FAM196BA6NMK8 535 aa18.61■□□□□ 0.57
PDE6D-201ENST00000287600 CCDC158Q5M9N0 1113 aa18.61■□□□□ 0.57
PDE6D-201ENST00000287600 CCDC84Q86UT8 332 aaPredicted RBP18.61■□□□□ 0.57
PDE6D-201ENST00000287600 RHPN1Q8TCX5 695 aa18.61■□□□□ 0.57
PDE6D-201ENST00000287600 CCDC8Q9H0W5 538 aaPredicted RBP18.61■□□□□ 0.57
PDE6D-201ENST00000287600 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.61■□□□□ 0.57
PDE6D-201ENST00000287600 BIN2Q9UBW5 565 aaPredicted RBP18.61■□□□□ 0.57
PDE6D-201ENST00000287600 SLC45A1Q9Y2W3 748 aa18.61■□□□□ 0.57
PDE6D-201ENST00000287600 UQCRFS1P1P0C7P4 283 aa18.6■□□□□ 0.57
PDE6D-201ENST00000287600 MCAMP43121 646 aa18.6■□□□□ 0.57
PDE6D-201ENST00000287600 UBXN2AP68543 259 aa18.6■□□□□ 0.57
PDE6D-201ENST00000287600 NOL10Q9BSC4 688 aaKnown RBP18.6■□□□□ 0.57
PDE6D-201ENST00000287600 OSBPL5Q9H0X9 879 aaPredicted RBP18.6■□□□□ 0.57
PDE6D-201ENST00000287600 BCL11AQ9H165 835 aa18.6■□□□□ 0.57
PDE6D-201ENST00000287600 IL1RAPL2Q9NP60 686 aa18.6■□□□□ 0.57
PDE6D-201ENST00000287600 LRP2BPQ9P2M1 347 aa18.6■□□□□ 0.57
PDE6D-201ENST00000287600 LOC285556D6RIA3 1793 aa18.6■□□□□ 0.57
PDE6D-201ENST00000287600 TBC1D12O60347 775 aa18.59■□□□□ 0.57
PDE6D-201ENST00000287600 RAB11FIP3O75154 756 aa18.59■□□□□ 0.57
PDE6D-201ENST00000287600 MAP4K4O95819 1239 aaPredicted RBP18.59■□□□□ 0.57
PDE6D-201ENST00000287600 TTC39AQ5SRH9 613 aa18.59■□□□□ 0.57
PDE6D-201ENST00000287600 AACSQ86V21 672 aa18.59■□□□□ 0.57
PDE6D-201ENST00000287600 TEX11Q8IYF3 940 aa18.59■□□□□ 0.57
PDE6D-201ENST00000287600 NKX2-3Q8TAU0 364 aa18.59■□□□□ 0.57
PDE6D-201ENST00000287600 SHISA4Q96DD7 197 aa18.59■□□□□ 0.57
PDE6D-201ENST00000287600 KIF1BPQ96EK5 621 aa18.59■□□□□ 0.57
PDE6D-201ENST00000287600 TLR7Q9NYK1 1049 aaKnown RBP18.59■□□□□ 0.57
PDE6D-201ENST00000287600 DBNLQ9UJU6 430 aaKnown RBP18.59■□□□□ 0.57
PDE6D-201ENST00000287600 AGTPBP1Q9UPW5 1226 aa18.59■□□□□ 0.57
PDE6D-201ENST00000287600 SUPT16HQ9Y5B9 1047 aaKnown RBP18.59■□□□□ 0.57
PDE6D-201ENST00000287600 CCL5P13501 91 aa18.58■□□□□ 0.56
PDE6D-201ENST00000287600 SLAIN1Q8ND83 568 aa18.58■□□□□ 0.56
PDE6D-201ENST00000287600 PNMA3Q9UL41 463 aa18.58■□□□□ 0.56
PDE6D-201ENST00000287600 GABRQQ9UN88 632 aa18.58■□□□□ 0.56
PDE6D-201ENST00000287600 PCDHB15Q9Y5E8 787 aa18.58■□□□□ 0.56
PDE6D-201ENST00000287600 TNPO2O14787 897 aaKnown RBP18.57■□□□□ 0.56
PDE6D-201ENST00000287600 CLASRPQ8N2M8 674 aaKnown RBP18.57■□□□□ 0.56
PDE6D-201ENST00000287600 RNF208Q9H0X6 261 aa18.57■□□□□ 0.56
PDE6D-201ENST00000287600 SIPA1L1O43166 1804 aa18.56■□□□□ 0.56
PDE6D-201ENST00000287600 TREML2Q5T2D2 321 aa18.56■□□□□ 0.56
PDE6D-201ENST00000287600 NAA16Q6N069 864 aaPredicted RBP18.56■□□□□ 0.56
PDE6D-201ENST00000287600 ANKRD13CQ8N6S4 541 aa18.56■□□□□ 0.56
PDE6D-201ENST00000287600 SH3RF3Q8TEJ3 882 aaPredicted RBP18.56■□□□□ 0.56
PDE6D-201ENST00000287600 SNRKQ9NRH2 765 aa18.56■□□□□ 0.56
PDE6D-201ENST00000287600 CDK5RAP2Q96SN8 1893 aa18.56■□□□□ 0.56
PDE6D-201ENST00000287600 FOCADQ5VW36 1801 aa18.56■□□□□ 0.56
PDE6D-201ENST00000287600 ADCY3O60266 1144 aa18.55■□□□□ 0.56
PDE6D-201ENST00000287600 GJB1P08034 283 aa18.55■□□□□ 0.56
PDE6D-201ENST00000287600 GJA8P48165 433 aa18.55■□□□□ 0.56
PDE6D-201ENST00000287600 FLT3LGP49771 235 aa18.55■□□□□ 0.56
PDE6D-201ENST00000287600 SPP2Q13103 211 aa18.55■□□□□ 0.56
PDE6D-201ENST00000287600 PROCA1Q8NCQ7 364 aaPredicted RBP18.55■□□□□ 0.56
PDE6D-201ENST00000287600 ZNF280CQ8ND82 737 aa18.55■□□□□ 0.56
PDE6D-201ENST00000287600 ZNF512BQ96KM6 892 aaPredicted RBP18.55■□□□□ 0.56
PDE6D-201ENST00000287600 TBC1D2Q9BYX2 928 aa18.55■□□□□ 0.56
PDE6D-201ENST00000287600 AATFQ9NY61 560 aaKnown RBP eCLIP18.55■□□□□ 0.56
PDE6D-201ENST00000287600 TAOK2Q9UL54 1235 aa18.55■□□□□ 0.56
PDE6D-201ENST00000287600 MYO5AQ9Y4I1 1855 aaKnown RBP18.54■□□□□ 0.56
PDE6D-201ENST00000287600 H0YGN5 161 aa18.54■□□□□ 0.56
PDE6D-201ENST00000287600 BAG3O95817 575 aa18.54■□□□□ 0.56
PDE6D-201ENST00000287600 IFIT2P09913 472 aaKnown RBP18.54■□□□□ 0.56
PDE6D-201ENST00000287600 DCTPP1Q9H773 170 aa18.54■□□□□ 0.56
PDE6D-201ENST00000287600 HERC5Q9UII4 1024 aaKnown RBP18.54■□□□□ 0.56
PDE6D-201ENST00000287600 COLQQ9Y215 455 aaPredicted RBP18.54■□□□□ 0.56
PDE6D-201ENST00000287600 USP17L5A8MUK1 530 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms