RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 MYH14Q7Z406 1995 aaKnown RBP10.47□□□□□ -0.73
CCDC144B-201ENST00000285176 AFDNP55196 1824 aaKnown RBP10.46□□□□□ -0.73
CCDC144B-201ENST00000285176 CNNM2Q9H8M5 875 aa10.46□□□□□ -0.73
CCDC144B-201ENST00000285176 DCP1AQ9NPI6 582 aaPredicted RBP10.46□□□□□ -0.73
CCDC144B-201ENST00000285176 HDAC9Q9UKV0 1011 aa10.46□□□□□ -0.73
CCDC144B-201ENST00000285176 RIC1Q4ADV7 1423 aa10.46□□□□□ -0.73
CCDC144B-201ENST00000285176 AK9Q5TCS8 1911 aa10.46□□□□□ -0.73
CCDC144B-201ENST00000285176 PDIA3P30101 505 aaKnown RBP10.46□□□□□ -0.74
CCDC144B-201ENST00000285176 TM4SF1P30408 202 aa10.46□□□□□ -0.74
CCDC144B-201ENST00000285176 PLCD1P51178 756 aa10.46□□□□□ -0.74
CCDC144B-201ENST00000285176 SLC10A5Q5PT55 438 aa10.46□□□□□ -0.74
CCDC144B-201ENST00000285176 BIN1O00499 593 aa10.46□□□□□ -0.74
CCDC144B-201ENST00000285176 F13A1P00488 732 aa10.46□□□□□ -0.74
CCDC144B-201ENST00000285176 XBP1P17861 261 aa10.46□□□□□ -0.74
CCDC144B-201ENST00000285176 RASSF7Q02833 373 aa10.46□□□□□ -0.74
CCDC144B-201ENST00000285176 CCDC93Q567U6 631 aa10.46□□□□□ -0.74
CCDC144B-201ENST00000285176 RASGRP2Q7LDG7 609 aa10.46□□□□□ -0.74
CCDC144B-201ENST00000285176 GPKOWQ92917 476 aaPredicted RBP eCLIP10.46□□□□□ -0.74
CCDC144B-201ENST00000285176 PLCH1Q4KWH8 1693 aa10.45□□□□□ -0.74
CCDC144B-201ENST00000285176 SNAP25P60880 206 aa10.45□□□□□ -0.74
CCDC144B-201ENST00000285176 FBXO33Q7Z6M2 555 aa10.45□□□□□ -0.74
CCDC144B-201ENST00000285176 FAM43AQ8N2R8 423 aa10.45□□□□□ -0.74
CCDC144B-201ENST00000285176 FZD1Q9UP38 647 aa10.45□□□□□ -0.74
CCDC144B-201ENST00000285176 NFIAQ12857 509 aa10.45□□□□□ -0.74
CCDC144B-201ENST00000285176 SP8Q8IXZ3 490 aa10.45□□□□□ -0.74
CCDC144B-201ENST00000285176 KDM3BQ7LBC6 1761 aa10.45□□□□□ -0.74
CCDC144B-201ENST00000285176 KINO60870 393 aaKnown RBP10.45□□□□□ -0.74
CCDC144B-201ENST00000285176 CDKL5O76039 1030 aa10.45□□□□□ -0.74
CCDC144B-201ENST00000285176 SLC16A2P36021 539 aa10.45□□□□□ -0.74
CCDC144B-201ENST00000285176 ZNF654Q8IZM8 581 aa10.45□□□□□ -0.74
CCDC144B-201ENST00000285176 TBC1D22AQ8WUA7 517 aa10.45□□□□□ -0.74
CCDC144B-201ENST00000285176 TAOK3Q9H2K8 898 aa10.45□□□□□ -0.74
CCDC144B-201ENST00000285176 GTF3C6Q969F1 213 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 CAMKK2Q96RR4 588 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 CSRNP1Q96S65 589 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 GIMAP6Q6P9H5 292 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 PLIN2Q99541 437 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 ZNF287Q9HBT7 754 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 SOGA3Q5TF21 947 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 CTR9Q6PD62 1173 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 USP17L2Q6R6M4 530 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 BRMS1Q9HCU9 246 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 CACNA1FO60840 1977 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 A0A087WWV3 80 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 CRKP46108 304 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 CFAP100Q494V2 611 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 HSP90AA4PQ58FG1 418 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 APOA5Q6Q788 366 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 SAMD7Q7Z3H4 446 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 COA1Q9GZY4 146 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 GRPEL1Q9HAV7 217 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 CABP5Q9NP86 173 aa10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 SEC63Q9UGP8 760 aaKnown RBP10.44□□□□□ -0.74
CCDC144B-201ENST00000285176 HMGN5P82970 282 aaKnown RBP10.43□□□□□ -0.74
CCDC144B-201ENST00000285176 USH1GQ495M9 461 aa10.43□□□□□ -0.74
CCDC144B-201ENST00000285176 TTC6Q86TZ1 520 aa10.43□□□□□ -0.74
CCDC144B-201ENST00000285176 RASGRP4Q8TDF6 673 aa10.43□□□□□ -0.74
CCDC144B-201ENST00000285176 AKT1S1Q96B36 256 aa10.43□□□□□ -0.74
CCDC144B-201ENST00000285176 CRAMP1Q96RY5 1269 aa10.43□□□□□ -0.74
CCDC144B-201ENST00000285176 TSPY26PQ9H489 355 aa10.43□□□□□ -0.74
CCDC144B-201ENST00000285176 HOOK1Q9UJC3 728 aaKnown RBP10.43□□□□□ -0.74
CCDC144B-201ENST00000285176 PAXIP1Q6ZW49 1069 aaPredicted RBP10.43□□□□□ -0.74
CCDC144B-201ENST00000285176 TRIM5Q9C035 493 aa10.43□□□□□ -0.74
CCDC144B-201ENST00000285176 DAGLAQ9Y4D2 1042 aa10.43□□□□□ -0.74
CCDC144B-201ENST00000285176 TAF1P21675 1872 aa10.43□□□□□ -0.74
CCDC144B-201ENST00000285176 PLCG2P16885 1265 aa10.43□□□□□ -0.74
CCDC144B-201ENST00000285176 KCTD1Q719H9 257 aa10.43□□□□□ -0.74
CCDC144B-201ENST00000285176 ZFP91Q96JP5 570 aaPredicted RBP10.43□□□□□ -0.74
CCDC144B-201ENST00000285176 ZSCAN10Q96SZ4 725 aaPredicted RBP10.43□□□□□ -0.74
CCDC144B-201ENST00000285176 HOMER2Q9NSB8 354 aa10.43□□□□□ -0.74
CCDC144B-201ENST00000285176 CCDC196A0A1B0GTZ2 297 aa10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 SSBP05455 408 aaKnown RBP eCLIP10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 CPXCR1Q8N123 301 aa10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 PNMA1Q8ND90 353 aa10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 ITGB4P16144 1822 aa10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 ABCC6O95255 1503 aa10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 MED23Q9ULK4 1368 aa10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 LRRC37A3O60309 1634 aa10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 PSMD14O00487 310 aa10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 PLEKHA8P1O95397 391 aa10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 MKRN3Q13064 507 aaKnown RBP10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 CCAR2Q8N163 923 aaKnown RBP10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 TM6SF1Q9BZW5 370 aa10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 TPM3P06753 285 aa10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 TSR1Q2NL82 804 aaKnown RBP10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 NLGN2Q8NFZ4 835 aa10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 NKX2-3Q8TAU0 364 aa10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 TTC14Q96N46 770 aa10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 CDC27P30260 824 aa10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 TDRD7Q8NHU6 1098 aaKnown RBP10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 PGBD1Q96JS3 809 aa10.42□□□□□ -0.74
CCDC144B-201ENST00000285176 ZNF396Q96N95 335 aaPredicted RBP10.41□□□□□ -0.74
CCDC144B-201ENST00000285176 GLI3P10071 1580 aa10.41□□□□□ -0.74
CCDC144B-201ENST00000285176 SHTN1A0MZ66 631 aa10.41□□□□□ -0.74
CCDC144B-201ENST00000285176 BTBD18B2RXH4 712 aa10.41□□□□□ -0.74
CCDC144B-201ENST00000285176 NAPAP54920 295 aa10.41□□□□□ -0.74
CCDC144B-201ENST00000285176 ANTXR2P58335 489 aa10.41□□□□□ -0.74
CCDC144B-201ENST00000285176 CHMP4BP1P59074 171 aa10.41□□□□□ -0.74
CCDC144B-201ENST00000285176 NR5A1Q13285 461 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms