RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CCAR1Q8IX12 1150 aaKnown RBP21.18■□□□□ 0.98
PDLIM3-201ENST00000284767 AATFQ9NY61 560 aaKnown RBP eCLIP21.18■□□□□ 0.98
PDLIM3-201ENST00000284767 CCDC73Q6ZRK6 1079 aa21.17■□□□□ 0.98
PDLIM3-201ENST00000284767 NYAP1Q6ZVC0 841 aa21.17■□□□□ 0.98
PDLIM3-201ENST00000284767 DDX41Q9UJV9 622 aaKnown RBP21.17■□□□□ 0.98
PDLIM3-201ENST00000284767 MYH13Q9UKX3 1938 aa21.17■□□□□ 0.98
PDLIM3-201ENST00000284767 WDR19Q8NEZ3 1342 aa21.17■□□□□ 0.98
PDLIM3-201ENST00000284767 POLRMTO00411 1230 aaKnown RBP21.17■□□□□ 0.98
PDLIM3-201ENST00000284767 ST5P78524 1137 aa21.17■□□□□ 0.98
PDLIM3-201ENST00000284767 GPSM2P81274 684 aa21.17■□□□□ 0.98
PDLIM3-201ENST00000284767 PPARAQ07869 468 aa21.17■□□□□ 0.98
PDLIM3-201ENST00000284767 TMEM67Q5HYA8 995 aa21.17■□□□□ 0.98
PDLIM3-201ENST00000284767 LY9Q9HBG7 655 aa21.17■□□□□ 0.98
PDLIM3-201ENST00000284767 KCND1Q9NSA2 647 aa21.17■□□□□ 0.98
PDLIM3-201ENST00000284767 ANO10Q9NW15 660 aa21.17■□□□□ 0.98
PDLIM3-201ENST00000284767 CHD4Q14839 1912 aa21.17■□□□□ 0.98
PDLIM3-201ENST00000284767 BECN2A8MW95 431 aa21.16■□□□□ 0.98
PDLIM3-201ENST00000284767 APBA3O96018 575 aa21.16■□□□□ 0.98
PDLIM3-201ENST00000284767 CDC27P30260 824 aa21.16■□□□□ 0.98
PDLIM3-201ENST00000284767 APOA5Q6Q788 366 aa21.16■□□□□ 0.98
PDLIM3-201ENST00000284767 BAZ2AQ9UIF9 1905 aaKnown RBP21.16■□□□□ 0.98
PDLIM3-201ENST00000284767 CPLX1O14810 134 aa21.16■□□□□ 0.98
PDLIM3-201ENST00000284767 GABPB1Q06547 395 aaPredicted RBP21.16■□□□□ 0.98
PDLIM3-201ENST00000284767 PTPN14Q15678 1187 aa21.16■□□□□ 0.98
PDLIM3-201ENST00000284767 GRIK5Q16478 980 aa21.16■□□□□ 0.98
PDLIM3-201ENST00000284767 CRY2Q49AN0 593 aa21.16■□□□□ 0.98
PDLIM3-201ENST00000284767 NFXL1Q6ZNB6 911 aa21.16■□□□□ 0.98
PDLIM3-201ENST00000284767 ZNF396Q96N95 335 aaPredicted RBP21.16■□□□□ 0.98
PDLIM3-201ENST00000284767 IFIT3O14879 490 aaKnown RBP21.15■□□□□ 0.98
PDLIM3-201ENST00000284767 KINO60870 393 aaKnown RBP21.15■□□□□ 0.98
PDLIM3-201ENST00000284767 SKILP12757 684 aa21.15■□□□□ 0.98
PDLIM3-201ENST00000284767 SNW1Q13573 536 aaKnown RBP21.15■□□□□ 0.98
PDLIM3-201ENST00000284767 AIFM3Q96NN9 605 aa21.15■□□□□ 0.98
PDLIM3-201ENST00000284767 SEMA3EO15041 775 aa21.15■□□□□ 0.98
PDLIM3-201ENST00000284767 METAP2P50579 478 aaKnown RBP eCLIP21.15■□□□□ 0.98
PDLIM3-201ENST00000284767 FAM160A1Q05DH4 1040 aa21.15■□□□□ 0.98
PDLIM3-201ENST00000284767 SLC4A8Q2Y0W8 1093 aa21.15■□□□□ 0.98
PDLIM3-201ENST00000284767 STAG1Q8WVM7 1258 aa21.15■□□□□ 0.98
PDLIM3-201ENST00000284767 ORC3Q9UBD5 711 aaPredicted RBP21.15■□□□□ 0.98
PDLIM3-201ENST00000284767 UBE2Q2LH0YL09 131 aa21.14■□□□□ 0.98
PDLIM3-201ENST00000284767 PRDM1O75626 825 aa21.14■□□□□ 0.98
PDLIM3-201ENST00000284767 DHX40Q8IX18 779 aaKnown RBP21.14■□□□□ 0.98
PDLIM3-201ENST00000284767 PHKBQ93100 1093 aa21.14■□□□□ 0.98
PDLIM3-201ENST00000284767 GOLPH3LQ9H4A5 285 aa21.14■□□□□ 0.98
PDLIM3-201ENST00000284767 MORC2Q9Y6X9 1032 aaPredicted RBP21.14■□□□□ 0.98
PDLIM3-201ENST00000284767 XDHP47989 1333 aa21.14■□□□□ 0.97
PDLIM3-201ENST00000284767 ILDR1Q86SU0 546 aaPredicted RBP21.14■□□□□ 0.97
PDLIM3-201ENST00000284767 COL23A1Q86Y22 540 aaPredicted RBP21.14■□□□□ 0.97
PDLIM3-201ENST00000284767 ENGASEQ8NFI3 743 aa21.14■□□□□ 0.97
PDLIM3-201ENST00000284767 CCDC69A6NI79 296 aa21.13■□□□□ 0.97
PDLIM3-201ENST00000284767 CEP57L1Q8IYX8 460 aa21.13■□□□□ 0.97
PDLIM3-201ENST00000284767 ZNF592Q92610 1267 aa21.13■□□□□ 0.97
PDLIM3-201ENST00000284767 TMEM87BQ96K49 555 aa21.13■□□□□ 0.97
PDLIM3-201ENST00000284767 NAT10Q9H0A0 1025 aaKnown RBP21.13■□□□□ 0.97
PDLIM3-201ENST00000284767 KIF2AO00139 706 aaPredicted RBP21.13■□□□□ 0.97
PDLIM3-201ENST00000284767 GSDMDP57764 484 aa21.13■□□□□ 0.97
PDLIM3-201ENST00000284767 CCZ1BP86790 482 aa21.13■□□□□ 0.97
PDLIM3-201ENST00000284767 CCZ1P86791 482 aaPredicted RBP21.13■□□□□ 0.97
PDLIM3-201ENST00000284767 TIAM2Q8IVF5 1701 aa21.12■□□□□ 0.97
PDLIM3-201ENST00000284767 UFL1O94874 794 aa21.12■□□□□ 0.97
PDLIM3-201ENST00000284767 ZNF397Q8NF99 534 aaPredicted RBP21.12■□□□□ 0.97
PDLIM3-201ENST00000284767 KIF18AQ8NI77 898 aa21.12■□□□□ 0.97
PDLIM3-201ENST00000284767 KRT23Q9C075 422 aa21.12■□□□□ 0.97
PDLIM3-201ENST00000284767 USP27XA6NNY8 438 aa21.12■□□□□ 0.97
PDLIM3-201ENST00000284767 ARID5BQ14865 1188 aa21.12■□□□□ 0.97
PDLIM3-201ENST00000284767 CHMP4CQ96CF2 233 aa21.12■□□□□ 0.97
PDLIM3-201ENST00000284767 CNNM2Q9H8M5 875 aa21.12■□□□□ 0.97
PDLIM3-201ENST00000284767 FAM217BQ9NTX9 383 aaPredicted RBP21.12■□□□□ 0.97
PDLIM3-201ENST00000284767 LEMD3Q9Y2U8 911 aa21.12■□□□□ 0.97
PDLIM3-201ENST00000284767 ZBTB43O43298 467 aa21.11■□□□□ 0.97
PDLIM3-201ENST00000284767 DHX16O60231 1041 aaKnown RBP21.11■□□□□ 0.97
PDLIM3-201ENST00000284767 NAA30Q147X3 362 aaPredicted RBP21.11■□□□□ 0.97
PDLIM3-201ENST00000284767 DIXDC1Q155Q3 683 aa21.11■□□□□ 0.97
PDLIM3-201ENST00000284767 ZNF772Q68DY9 489 aaPredicted RBP21.11■□□□□ 0.97
PDLIM3-201ENST00000284767 CCAR2Q8N163 923 aaKnown RBP21.11■□□□□ 0.97
PDLIM3-201ENST00000284767 USP28Q96RU2 1077 aa21.11■□□□□ 0.97
PDLIM3-201ENST00000284767 USP17L12C9JPN9 530 aa21.11■□□□□ 0.97
PDLIM3-201ENST00000284767 USP17L21D6R901 530 aa21.11■□□□□ 0.97
PDLIM3-201ENST00000284767 OLFM4Q6UX06 510 aa21.11■□□□□ 0.97
PDLIM3-201ENST00000284767 ERO1AQ96HE7 468 aa21.11■□□□□ 0.97
PDLIM3-201ENST00000284767 CTR9Q6PD62 1173 aa21.1■□□□□ 0.97
PDLIM3-201ENST00000284767 SGMS1Q86VZ5 419 aa21.1■□□□□ 0.97
PDLIM3-201ENST00000284767 RBM17Q96I25 401 aaKnown RBP21.1■□□□□ 0.97
PDLIM3-201ENST00000284767 C8orf76Q96K31 380 aa21.1■□□□□ 0.97
PDLIM3-201ENST00000284767 IMPACTQ9P2X3 320 aa21.1■□□□□ 0.97
PDLIM3-201ENST00000284767 GOLGA8AA7E2F4 631 aa21.1■□□□□ 0.97
PDLIM3-201ENST00000284767 MSL1Q68DK7 614 aa21.1■□□□□ 0.97
PDLIM3-201ENST00000284767 DZIP1Q86YF9 867 aaKnown RBP21.1■□□□□ 0.97
PDLIM3-201ENST00000284767 CMTR1Q8N1G2 835 aaKnown RBP21.1■□□□□ 0.97
PDLIM3-201ENST00000284767 SLC12A7Q9Y666 1083 aa21.1■□□□□ 0.97
PDLIM3-201ENST00000284767 RANBP6O60518 1105 aaKnown RBP21.09■□□□□ 0.97
PDLIM3-201ENST00000284767 POLR3DP05423 398 aaPredicted RBP21.09■□□□□ 0.97
PDLIM3-201ENST00000284767 CYP2D6P10635 497 aa21.09■□□□□ 0.97
PDLIM3-201ENST00000284767 FILIP1Q7Z7B0 1213 aa21.09■□□□□ 0.97
PDLIM3-201ENST00000284767 FSIP1Q8NA03 581 aa21.09■□□□□ 0.97
PDLIM3-201ENST00000284767 OSBPL5Q9H0X9 879 aaPredicted RBP21.09■□□□□ 0.97
PDLIM3-201ENST00000284767 POLLQ9UGP5 575 aa21.09■□□□□ 0.97
PDLIM3-201ENST00000284767 ZNF215Q9UL58 517 aaPredicted RBP21.09■□□□□ 0.97
PDLIM3-201ENST00000284767 PDS5AQ29RF7 1337 aaKnown RBP21.09■□□□□ 0.97
PDLIM3-201ENST00000284767 LIFRP42702 1097 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms