RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 RTEL1Q9NZ71 1219 aa6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 CNTNAP4Q9C0A0 1308 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 SMC2O95347 1197 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 SERPINB2P05120 415 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 SYKP43405 635 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 EVCP57679 992 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 GRIN1Q05586 938 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 PICALMQ13492 652 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 PNOCQ13519 176 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 NTRK3Q16288 839 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 ADALQ6DHV7 355 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 PRR5LQ6MZQ0 368 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 RASGRP2Q7LDG7 609 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 BRAPQ7Z569 592 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 CREBRFQ8IUR6 639 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 STAG1Q8WVM7 1258 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 TSC1Q92574 1164 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 ZSCAN10Q96SZ4 725 aaPredicted RBP6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 DCP1AQ9NPI6 582 aaPredicted RBP6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 CLIP2Q9UDT6 1046 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 COL1A1P02452 1464 aaPredicted RBP6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 MROH7-TTC4A0A0A0MT08 1334 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 G3V3G9 751 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 LMOD1P29536 600 aaPredicted RBP6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 ARID5BQ14865 1188 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 STX1AQ16623 288 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 NOM1Q5C9Z4 860 aaKnown RBP6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 DCAF8Q5TAQ9 597 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 AEBP2Q6ZN18 517 aaPredicted RBP6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 GRAMD1CQ8IYS0 662 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 CEP57L1Q8IYX8 460 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 NOL10Q9BSC4 688 aaKnown RBP6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 ANKRD2Q9GZV1 360 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 PYCARDQ9ULZ3 195 aa6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 AHDC1Q5TGY3 1603 aaPredicted RBP6.98□□□□□ -1.29
TNFSF4-201ENST00000281834 USP17L3A6NCW0 530 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 USP17L4A6NCW7 530 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 FOXN1O15353 648 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 GOLGA8HP0CJ92 632 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 VEGFAP15692 232 aaPredicted RBP6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 LIFRP42702 1097 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 EIF6P56537 245 aaKnown RBP6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 TFAP4Q01664 338 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 ALX1Q15699 326 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 ZNF827Q17R98 1081 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 USP17L1Q7RTZ2 530 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 FBXO33Q7Z6M2 555 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 SGMS1Q86VZ5 419 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 HOMER1Q86YM7 354 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 SH3RF3Q8TEJ3 882 aaPredicted RBP6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 STAMQ92783 540 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 VAT1LQ9HCJ6 419 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 PCDHB6Q9Y5E3 794 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 PNPLA7Q6ZV29 1317 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 AKAP11Q9UKA4 1901 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 CCDC196A0A1B0GTZ2 297 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 GOLGA6L6A8MZA4 724 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 ATP2B2Q01814 1243 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 NOSTRINQ8IVI9 506 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 FMR1NBQ8N0W7 255 aaPredicted RBP6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 CRACR2BQ8N4Y2 399 aaPredicted RBP6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 CTCFLQ8NI51 663 aaPredicted RBP6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 GPKOWQ92917 476 aaPredicted RBP eCLIP6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 MXD3Q9BW11 206 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 ANO10Q9NW15 660 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 LTBP4Q8N2S1 1624 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 PLCH1Q4KWH8 1693 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 FMNL1O95466 1100 aaPredicted RBP6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 IFNAR1P17181 557 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 ST5P78524 1137 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 GPSM2P81274 684 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 ZNF174Q15697 407 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 DOK7Q18PE1 504 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 MFSD14BQ5SR56 506 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 USP49Q70CQ1 688 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 CNNM3Q8NE01 707 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 RASGRP4Q8TDF6 673 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 ZNF592Q92610 1267 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 POLR3EQ9NVU0 708 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 FAM13BQ9NYF5 915 aa6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 TRPC5Q9UL62 973 aaPredicted RBP6.97□□□□□ -1.29
TNFSF4-201ENST00000281834 CASP1P29466 404 aa6.96□□□□□ -1.29
TNFSF4-201ENST00000281834 TM4SF1P30408 202 aa6.96□□□□□ -1.29
TNFSF4-201ENST00000281834 AFMP43652 599 aa6.96□□□□□ -1.29
TNFSF4-201ENST00000281834 GTF2IP78347 998 aa6.96□□□□□ -1.29
TNFSF4-201ENST00000281834 GRAPQ13588 217 aa6.96□□□□□ -1.29
TNFSF4-201ENST00000281834 SLC39A14Q15043 492 aa6.96□□□□□ -1.29
TNFSF4-201ENST00000281834 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.96□□□□□ -1.29
TNFSF4-201ENST00000281834 JMYQ8N9B5 988 aa6.96□□□□□ -1.29
TNFSF4-201ENST00000281834 ENGASEQ8NFI3 743 aa6.96□□□□□ -1.29
TNFSF4-201ENST00000281834 GRAPLQ8TC17 118 aaPredicted RBP6.96□□□□□ -1.29
TNFSF4-201ENST00000281834 POLR2DO15514 142 aaKnown RBP6.96□□□□□ -1.3
TNFSF4-201ENST00000281834 DEXIO95424 95 aa6.96□□□□□ -1.3
TNFSF4-201ENST00000281834 YEATS4O95619 227 aa6.96□□□□□ -1.3
TNFSF4-201ENST00000281834 TSPY3P0CV98 308 aa6.96□□□□□ -1.3
TNFSF4-201ENST00000281834 TSPY8P0CW00 308 aa6.96□□□□□ -1.3
TNFSF4-201ENST00000281834 SLURP2P0DP57 97 aa6.96□□□□□ -1.3
TNFSF4-201ENST00000281834 GYS1P13807 737 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms