RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 CCDC158Q5M9N0 1113 aa13.03□□□□□ -0.32
SCLT1-201ENST00000281142 TRAPPC3LQ5T215 181 aa13.03□□□□□ -0.32
SCLT1-201ENST00000281142 VSTM4Q8IW00 320 aa13.03□□□□□ -0.32
SCLT1-201ENST00000281142 PDILTQ8N807 584 aa13.03□□□□□ -0.32
SCLT1-201ENST00000281142 NKX2-3Q8TAU0 364 aa13.03□□□□□ -0.32
SCLT1-201ENST00000281142 PARD6BQ9BYG5 372 aa13.03□□□□□ -0.32
SCLT1-201ENST00000281142 SRP68Q9UHB9 627 aaKnown RBP13.03□□□□□ -0.32
SCLT1-201ENST00000281142 A0A0U1RQJ8 604 aa13.03□□□□□ -0.32
SCLT1-201ENST00000281142 GOLGA8BA8MQT2 603 aa13.03□□□□□ -0.32
SCLT1-201ENST00000281142 PPP2R3AQ06190 1150 aa13.03□□□□□ -0.32
SCLT1-201ENST00000281142 ZMYM1Q5SVZ6 1142 aa13.03□□□□□ -0.32
SCLT1-201ENST00000281142 FOXP4Q8IVH2 680 aaPredicted RBP13.03□□□□□ -0.32
SCLT1-201ENST00000281142 ATRIPQ8WXE1 791 aa13.03□□□□□ -0.32
SCLT1-201ENST00000281142 DSCC1Q9BVC3 393 aa13.03□□□□□ -0.32
SCLT1-201ENST00000281142 RXRAP19793 462 aa13.02□□□□□ -0.32
SCLT1-201ENST00000281142 SYKP43405 635 aa13.02□□□□□ -0.32
SCLT1-201ENST00000281142 TNNT3P45378 269 aaPredicted RBP13.02□□□□□ -0.32
SCLT1-201ENST00000281142 KIF23Q02241 960 aaPredicted RBP13.02□□□□□ -0.32
SCLT1-201ENST00000281142 SLC15A2Q16348 729 aa13.02□□□□□ -0.32
SCLT1-201ENST00000281142 SHC4Q6S5L8 630 aa13.02□□□□□ -0.32
SCLT1-201ENST00000281142 LMBR1LQ6UX01 489 aa13.02□□□□□ -0.32
SCLT1-201ENST00000281142 SYNE3Q6ZMZ3 975 aa13.02□□□□□ -0.32
SCLT1-201ENST00000281142 DHX58Q96C10 678 aa13.02□□□□□ -0.32
SCLT1-201ENST00000281142 CHMP4CQ96CF2 233 aa13.02□□□□□ -0.32
SCLT1-201ENST00000281142 EFCC1Q9HA90 598 aa13.02□□□□□ -0.32
SCLT1-201ENST00000281142 A0A087WZG4 1122 aa13.02□□□□□ -0.33
SCLT1-201ENST00000281142 IKBKBO14920 756 aa13.02□□□□□ -0.33
SCLT1-201ENST00000281142 FOXP2O15409 715 aa13.02□□□□□ -0.33
SCLT1-201ENST00000281142 TFRCP02786 760 aaKnown RBP13.02□□□□□ -0.33
SCLT1-201ENST00000281142 CHRM1P11229 460 aaPredicted RBP13.02□□□□□ -0.33
SCLT1-201ENST00000281142 MYL5Q02045 173 aa13.02□□□□□ -0.33
SCLT1-201ENST00000281142 MTF1Q14872 753 aa13.02□□□□□ -0.33
SCLT1-201ENST00000281142 SPECC1Q5M775 1068 aa13.02□□□□□ -0.33
SCLT1-201ENST00000281142 GIGYF2Q6Y7W6 1299 aaKnown RBP13.02□□□□□ -0.33
SCLT1-201ENST00000281142 OSBP2Q969R2 916 aa13.02□□□□□ -0.33
SCLT1-201ENST00000281142 ERVV-1B6SEH8 477 aa13.02□□□□□ -0.33
SCLT1-201ENST00000281142 BMP6P22004 513 aa13.02□□□□□ -0.33
SCLT1-201ENST00000281142 CMA1P23946 247 aa13.02□□□□□ -0.33
SCLT1-201ENST00000281142 CASQ1P31415 396 aa13.02□□□□□ -0.33
SCLT1-201ENST00000281142 FUT8Q9BYC5 575 aa13.02□□□□□ -0.33
SCLT1-201ENST00000281142 RASSF4Q9H2L5 321 aa13.02□□□□□ -0.33
SCLT1-201ENST00000281142 NARFQ9UHQ1 456 aa13.02□□□□□ -0.33
SCLT1-201ENST00000281142 PNPLA7Q6ZV29 1317 aa13.02□□□□□ -0.33
SCLT1-201ENST00000281142 UBE2Q2LH0YL09 131 aa13.01□□□□□ -0.33
SCLT1-201ENST00000281142 ADRA2BP18089 450 aa13.01□□□□□ -0.33
SCLT1-201ENST00000281142 HMGB2P26583 209 aaKnown RBP13.01□□□□□ -0.33
SCLT1-201ENST00000281142 RFC4P35249 363 aa13.01□□□□□ -0.33
SCLT1-201ENST00000281142 NOP2P46087 812 aaKnown RBP13.01□□□□□ -0.33
SCLT1-201ENST00000281142 MAP3K9P80192 1104 aa13.01□□□□□ -0.33
SCLT1-201ENST00000281142 MUM1L1Q5H9M0 696 aa13.01□□□□□ -0.33
SCLT1-201ENST00000281142 STK11IPQ8N1F8 1099 aa13.01□□□□□ -0.33
SCLT1-201ENST00000281142 ZNF594Q96JF6 807 aaPredicted RBP13.01□□□□□ -0.33
SCLT1-201ENST00000281142 HELLSQ9NRZ9 838 aa13.01□□□□□ -0.33
SCLT1-201ENST00000281142 MRFAP1Q9Y605 127 aa13.01□□□□□ -0.33
SCLT1-201ENST00000281142 PRC1O43663 620 aa13.01□□□□□ -0.33
SCLT1-201ENST00000281142 ZSCAN26Q16670 478 aa13.01□□□□□ -0.33
SCLT1-201ENST00000281142 RSRC2Q7L4I2 434 aaKnown RBP13.01□□□□□ -0.33
SCLT1-201ENST00000281142 METTL16Q86W50 562 aaKnown RBP13.01□□□□□ -0.33
SCLT1-201ENST00000281142 COL23A1Q86Y22 540 aaPredicted RBP13.01□□□□□ -0.33
SCLT1-201ENST00000281142 CCDC191Q8NCU4 936 aa13.01□□□□□ -0.33
SCLT1-201ENST00000281142 KIFC2Q96AC6 838 aa13.01□□□□□ -0.33
SCLT1-201ENST00000281142 TUBE1Q9UJT0 475 aa13.01□□□□□ -0.33
SCLT1-201ENST00000281142 RFX7Q2KHR2 1363 aa13.01□□□□□ -0.33
SCLT1-201ENST00000281142 LMAN1P49257 510 aa13□□□□□ -0.33
SCLT1-201ENST00000281142 ANTXR2P58335 489 aa13□□□□□ -0.33
SCLT1-201ENST00000281142 TCIRG1Q13488 830 aa13□□□□□ -0.33
SCLT1-201ENST00000281142 C10orf67Q8IYJ2 551 aa13□□□□□ -0.33
SCLT1-201ENST00000281142 TRMT44Q8IYL2 757 aaKnown RBP13□□□□□ -0.33
SCLT1-201ENST00000281142 TXLNBQ8N3L3 684 aa13□□□□□ -0.33
SCLT1-201ENST00000281142 SRRTQ9BXP5 876 aaKnown RBP13□□□□□ -0.33
SCLT1-201ENST00000281142 ZPR1O75312 459 aa13□□□□□ -0.33
SCLT1-201ENST00000281142 LONRF3Q496Y0 759 aa13□□□□□ -0.33
SCLT1-201ENST00000281142 LRRC24Q50LG9 513 aa13□□□□□ -0.33
SCLT1-201ENST00000281142 ATG9AQ7Z3C6 839 aa13□□□□□ -0.33
SCLT1-201ENST00000281142 SECISBP2LQ93073 1101 aaKnown RBP13□□□□□ -0.33
SCLT1-201ENST00000281142 BAG1Q99933 345 aaPredicted RBP13□□□□□ -0.33
SCLT1-201ENST00000281142 MRPL44Q9H9J2 332 aaKnown RBP13□□□□□ -0.33
SCLT1-201ENST00000281142 STK32BQ9NY57 414 aa13□□□□□ -0.33
SCLT1-201ENST00000281142 CCP110O43303 1012 aa12.99□□□□□ -0.33
SCLT1-201ENST00000281142 TUBB4AP04350 444 aa12.99□□□□□ -0.33
SCLT1-201ENST00000281142 RABL6Q3YEC7 729 aaPredicted RBP12.99□□□□□ -0.33
SCLT1-201ENST00000281142 SUGCTQ9HAC7 445 aa12.99□□□□□ -0.33
SCLT1-201ENST00000281142 ARFGAP3Q9NP61 516 aa12.99□□□□□ -0.33
SCLT1-201ENST00000281142 PCDHA5Q9Y5H7 936 aa12.99□□□□□ -0.33
SCLT1-201ENST00000281142 CPLX1O14810 134 aa12.99□□□□□ -0.33
SCLT1-201ENST00000281142 ARHGAP6O43182 974 aa12.99□□□□□ -0.33
SCLT1-201ENST00000281142 ZSCAN12O43309 604 aa12.99□□□□□ -0.33
SCLT1-201ENST00000281142 GPTP24298 496 aa12.99□□□□□ -0.33
SCLT1-201ENST00000281142 SLC39A14Q15043 492 aa12.99□□□□□ -0.33
SCLT1-201ENST00000281142 GPR161Q8N6U8 529 aaKnown RBP12.99□□□□□ -0.33
SCLT1-201ENST00000281142 TC2NQ8N9U0 490 aa12.99□□□□□ -0.33
SCLT1-201ENST00000281142 PUF60Q9UHX1 559 aaKnown RBP12.99□□□□□ -0.33
SCLT1-201ENST00000281142 ADAM21Q9UKJ8 722 aa12.99□□□□□ -0.33
SCLT1-201ENST00000281142 UBN2Q6ZU65 1347 aa12.99□□□□□ -0.33
SCLT1-201ENST00000281142 RNF113AO15541 343 aaKnown RBP12.99□□□□□ -0.33
SCLT1-201ENST00000281142 DHX16O60231 1041 aaKnown RBP12.99□□□□□ -0.33
SCLT1-201ENST00000281142 FKBP4Q02790 459 aaKnown RBP eCLIP12.99□□□□□ -0.33
SCLT1-201ENST00000281142 FMR1Q06787 632 aaKnown RBP eCLIP12.99□□□□□ -0.333e-7■■■■□ 25.7
SCLT1-201ENST00000281142 LONRF2Q1L5Z9 754 aa12.99□□□□□ -0.33
SCLT1-201ENST00000281142 WWC2Q6AWC2 1192 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms