RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 DUOX1Q9NRD9 1551 aa13.14□□□□□ -0.31
SIRPB1-202ENST00000279477 MARCKSP29966 332 aaPredicted RBP13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 CCZ1BP86790 482 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 CCZ1P86791 482 aaPredicted RBP13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 CTDSPL2Q05D32 466 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 CHRNDQ07001 517 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 UBE4AQ14139 1066 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 PTPN14Q15678 1187 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 CEP135Q66GS9 1140 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 FILIP1Q7Z7B0 1213 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 AIFM3Q96NN9 605 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 MYH13Q9UKX3 1938 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 LAMB1P07942 1786 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 RXRAP19793 462 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 SFPQP23246 707 aaKnown RBP eCLIP13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 PPARAQ07869 468 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 KANK3Q6NY19 840 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 SHC4Q6S5L8 630 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 LCORLQ8N3X6 602 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 ZNF579Q8NAF0 562 aaKnown RBP13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 TOMM22Q9NS69 142 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 GJB4Q9NTQ9 266 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 DENND2AQ9ULE3 1009 aa13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 MYH14Q7Z406 1995 aaKnown RBP13.13□□□□□ -0.31
SIRPB1-202ENST00000279477 SEMA3EO15041 775 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 BMP15O95972 392 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 ANKRD18AQ8IVF6 992 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 ANKRD7Q92527 254 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 RNF26Q9BY78 433 aaPredicted RBP13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 SEC31BQ9NQW1 1179 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 PDS5AQ29RF7 1337 aaKnown RBP13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 MAGEB6P1A0A0J9YX57 407 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 PSDA5PKW4 1024 aaPredicted RBP13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 CALM1P0DP23 149 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 CALM2P0DP24 149 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 CALM3P0DP25 149 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 CYP7A1P22680 504 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 NT5C2P49902 561 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 AKAP17AQ02040 695 aaKnown RBP13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 CAVIN4Q5BKX8 364 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 KRBA2Q6ZNG9 492 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 NYAP1Q6ZVC0 841 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 DIS3L2Q8IYB7 885 aaKnown RBP13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 ZNF654Q8IZM8 581 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 TRIML1Q8N9V2 468 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 CNNM3Q8NE01 707 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 XPO4Q9C0E2 1151 aaKnown RBP13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 SENP2Q9HC62 589 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 RBM28Q9NW13 759 aaKnown RBP13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 IFNKQ9P0W0 207 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 KCNH3Q9ULD8 1083 aa13.12□□□□□ -0.31
SIRPB1-202ENST00000279477 CACNA1SQ13698 1873 aa13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 ZBTB22O15209 634 aa13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 IGSF3O75054 1194 aa13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 ZSCAN20P17040 1043 aaPredicted RBP13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 BCAMP50895 628 aa13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 NCAPHQ15003 741 aa13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 RRP12Q5JTH9 1297 aaKnown RBP13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 NBPF11Q86T75 865 aa13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 CCAR2Q8N163 923 aaKnown RBP13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 MYL10Q9BUA6 226 aa13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 BRIP1Q9BX63 1249 aa13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 BIN1O00499 593 aa13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 SF3B3Q15393 1217 aaKnown RBP13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 BARGINQ6ZT62 677 aa13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 TMC6Q7Z403 805 aa13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 ZNF710Q8N1W2 664 aa13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 CRACR2BQ8N4Y2 399 aaPredicted RBP13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 FANCBQ8NB91 859 aa13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 ERCC4Q92889 916 aaPredicted RBP13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 FBXW7Q969H0 707 aa13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 FEZ1Q99689 392 aa13.11□□□□□ -0.31
SIRPB1-202ENST00000279477 KIAA1551Q9HCM1 1747 aa13.1□□□□□ -0.31
SIRPB1-202ENST00000279477 PTPREP23469 700 aa13.1□□□□□ -0.31
SIRPB1-202ENST00000279477 FANCCQ00597 558 aa13.1□□□□□ -0.31
SIRPB1-202ENST00000279477 CT47A1Q5JQC4 288 aaPredicted RBP13.1□□□□□ -0.31
SIRPB1-202ENST00000279477 PDCL2Q8N4E4 241 aa13.1□□□□□ -0.31
SIRPB1-202ENST00000279477 KIF18AQ8NI77 898 aa13.1□□□□□ -0.31
SIRPB1-202ENST00000279477 BCL11BQ9C0K0 894 aaPredicted RBP13.1□□□□□ -0.31
SIRPB1-202ENST00000279477 BRMS1Q9HCU9 246 aa13.1□□□□□ -0.31
SIRPB1-202ENST00000279477 BSDC1Q9NW68 430 aaPredicted RBP13.1□□□□□ -0.31
SIRPB1-202ENST00000279477 COL24A1Q17RW2 1714 aa13.1□□□□□ -0.31
SIRPB1-202ENST00000279477 MYH2Q9UKX2 1941 aa13.09□□□□□ -0.31
SIRPB1-202ENST00000279477 FAM177BA6PVY3 158 aa13.09□□□□□ -0.31
SIRPB1-202ENST00000279477 IQCA1Q86XH1 822 aa13.09□□□□□ -0.31
SIRPB1-202ENST00000279477 RAI14Q9P0K7 980 aa13.09□□□□□ -0.31
SIRPB1-202ENST00000279477 TNKSO95271 1327 aa13.09□□□□□ -0.31
SIRPB1-202ENST00000279477 PRKAB2O43741 272 aa13.09□□□□□ -0.31
SIRPB1-202ENST00000279477 DDAH1O94760 285 aa13.09□□□□□ -0.31
SIRPB1-202ENST00000279477 CATIPQ7Z7H3 387 aa13.09□□□□□ -0.31
SIRPB1-202ENST00000279477 MLKLQ8NB16 471 aa13.09□□□□□ -0.31
SIRPB1-202ENST00000279477 CGNQ9P2M7 1197 aaKnown RBP13.09□□□□□ -0.31
SIRPB1-202ENST00000279477 SPATA31A5Q5VU36 1347 aa13.09□□□□□ -0.31
SIRPB1-202ENST00000279477 SPATA31A7Q8IWB4 1347 aa13.09□□□□□ -0.31
SIRPB1-202ENST00000279477 CCDC88AQ3V6T2 1871 aa13.08□□□□□ -0.31
SIRPB1-202ENST00000279477 A0A087WWV3 80 aa13.08□□□□□ -0.32
SIRPB1-202ENST00000279477 A0A0G2JS52 829 aa13.08□□□□□ -0.32
SIRPB1-202ENST00000279477 BTBD18B2RXH4 712 aa13.08□□□□□ -0.32
SIRPB1-202ENST00000279477 SERPINC1P01008 464 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms