RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 ZNF827Q17R98 1081 aa14.37□□□□□ -0.11
BEST3-201ENST00000266661 CPLX2Q6PUV4 134 aaKnown RBP14.37□□□□□ -0.11
BEST3-201ENST00000266661 METTL16Q86W50 562 aaKnown RBP14.37□□□□□ -0.11
BEST3-201ENST00000266661 SPATA5Q8NB90 893 aa14.37□□□□□ -0.11
BEST3-201ENST00000266661 FEZ1Q99689 392 aa14.37□□□□□ -0.11
BEST3-201ENST00000266661 PDGFDQ9GZP0 370 aaPredicted RBP14.37□□□□□ -0.11
BEST3-201ENST00000266661 GOLGA8AA7E2F4 631 aa14.36□□□□□ -0.11
BEST3-201ENST00000266661 RASGRF1Q13972 1273 aa14.36□□□□□ -0.11
BEST3-201ENST00000266661 TMEM67Q5HYA8 995 aa14.36□□□□□ -0.11
BEST3-201ENST00000266661 TMC6Q7Z403 805 aa14.36□□□□□ -0.11
BEST3-201ENST00000266661 JMYQ8N9B5 988 aa14.36□□□□□ -0.11
BEST3-201ENST00000266661 CLIC6Q96NY7 704 aa14.36□□□□□ -0.11
BEST3-201ENST00000266661 TMX1Q9H3N1 280 aa14.36□□□□□ -0.11
BEST3-201ENST00000266661 L2HGDHQ9H9P8 463 aa14.36□□□□□ -0.11
BEST3-201ENST00000266661 KIF2AO00139 706 aaPredicted RBP14.35□□□□□ -0.11
BEST3-201ENST00000266661 APPP05067 770 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 ATP1A3P13637 1013 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 TOB1P50616 345 aaPredicted RBP14.35□□□□□ -0.11
BEST3-201ENST00000266661 UTP14CQ5TAP6 766 aaKnown RBP14.35□□□□□ -0.11
BEST3-201ENST00000266661 MICU3Q86XE3 530 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 STK11IPQ8N1F8 1099 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 MTA3Q9BTC8 594 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 TRMT1Q9NXH9 659 aaKnown RBP14.35□□□□□ -0.11
BEST3-201ENST00000266661 BCORQ6W2J9 1755 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 PNPLA7Q6ZV29 1317 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 MYO1BO43795 1136 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 MBD4O95243 580 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 SMC2O95347 1197 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 BMP6P22004 513 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 CBX1P83916 185 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 CTDSPL2Q05D32 466 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 LONRF3Q496Y0 759 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 AKNAD1Q5T1N1 836 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 KRBA2Q6ZNG9 492 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 HELBQ8NG08 1087 aaPredicted RBP14.35□□□□□ -0.11
BEST3-201ENST00000266661 STAG1Q8WVM7 1258 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 DPF2Q92785 391 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 AIDAQ96BJ3 306 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 PPP1R13BQ96KQ4 1090 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 MYL10Q9BUA6 226 aa14.35□□□□□ -0.11
BEST3-201ENST00000266661 CGNQ9P2M7 1197 aaKnown RBP14.35□□□□□ -0.11
BEST3-201ENST00000266661 ZNF215Q9UL58 517 aaPredicted RBP14.35□□□□□ -0.11
BEST3-201ENST00000266661 GUCY1A2P33402 732 aa14.34□□□□□ -0.11
BEST3-201ENST00000266661 EIF5P55010 431 aaKnown RBP14.34□□□□□ -0.11
BEST3-201ENST00000266661 MYL5Q02045 173 aa14.34□□□□□ -0.11
BEST3-201ENST00000266661 PNOCQ13519 176 aa14.34□□□□□ -0.11
BEST3-201ENST00000266661 ZRSR1Q15695 479 aaKnown RBP14.34□□□□□ -0.11
BEST3-201ENST00000266661 CCDC93Q567U6 631 aa14.34□□□□□ -0.11
BEST3-201ENST00000266661 DZIP3Q86Y13 1208 aaKnown RBP14.34□□□□□ -0.11
BEST3-201ENST00000266661 CNNM2Q9H8M5 875 aa14.34□□□□□ -0.11
BEST3-201ENST00000266661 MMP1P03956 469 aa14.33□□□□□ -0.11
BEST3-201ENST00000266661 SLC5A1P13866 664 aa14.33□□□□□ -0.11
BEST3-201ENST00000266661 LMOD1P29536 600 aaPredicted RBP14.33□□□□□ -0.11
BEST3-201ENST00000266661 RCAN1P53805 252 aa14.33□□□□□ -0.11
BEST3-201ENST00000266661 TPM4P67936 248 aa14.33□□□□□ -0.11
BEST3-201ENST00000266661 DMTNQ08495 405 aa14.33□□□□□ -0.11
BEST3-201ENST00000266661 SSRP1Q08945 709 aaKnown RBP14.33□□□□□ -0.11
BEST3-201ENST00000266661 SLC27A3Q5K4L6 730 aa14.33□□□□□ -0.11
BEST3-201ENST00000266661 NT5DC1Q5TFE4 455 aa14.33□□□□□ -0.11
BEST3-201ENST00000266661 SUSD4Q5VX71 490 aa14.33□□□□□ -0.11
BEST3-201ENST00000266661 UBR3Q6ZT12 1888 aa14.33□□□□□ -0.11
BEST3-201ENST00000266661 NOSTRINQ8IVI9 506 aa14.33□□□□□ -0.11
BEST3-201ENST00000266661 MAGEB6Q8N7X4 407 aa14.33□□□□□ -0.11
BEST3-201ENST00000266661 KIF18AQ8NI77 898 aa14.33□□□□□ -0.11
BEST3-201ENST00000266661 ERO1AQ96HE7 468 aa14.33□□□□□ -0.11
BEST3-201ENST00000266661 ARMT1Q9H993 441 aa14.33□□□□□ -0.11
BEST3-201ENST00000266661 FAM53CQ9NYF3 392 aa14.33□□□□□ -0.11
BEST3-201ENST00000266661 FBXO2Q9UK22 296 aaPredicted RBP14.33□□□□□ -0.11
BEST3-201ENST00000266661 KCNH3Q9ULD8 1083 aa14.33□□□□□ -0.11
BEST3-201ENST00000266661 MORC2Q9Y6X9 1032 aaPredicted RBP14.33□□□□□ -0.11
BEST3-201ENST00000266661 GOLGB1Q14789 3259 aaKnown RBP14.33□□□□□ -0.12
BEST3-201ENST00000266661 RTL9Q8NET4 1388 aa14.33□□□□□ -0.12
BEST3-201ENST00000266661 SNAP23O00161 211 aa14.33□□□□□ -0.12
BEST3-201ENST00000266661 IFIT3O14879 490 aaKnown RBP14.33□□□□□ -0.12
BEST3-201ENST00000266661 PRKAB2O43741 272 aa14.33□□□□□ -0.12
BEST3-201ENST00000266661 SFPQP23246 707 aaKnown RBP eCLIP14.33□□□□□ -0.12
BEST3-201ENST00000266661 PTPREP23469 700 aa14.33□□□□□ -0.12
BEST3-201ENST00000266661 SARSP49591 514 aaKnown RBP14.33□□□□□ -0.12
BEST3-201ENST00000266661 MAP3K12Q12852 859 aa14.33□□□□□ -0.12
BEST3-201ENST00000266661 R3HDM1Q15032 1099 aaKnown RBP14.33□□□□□ -0.12
BEST3-201ENST00000266661 ISM2Q6H9L7 571 aa14.33□□□□□ -0.12
BEST3-201ENST00000266661 ZNF592Q92610 1267 aa14.33□□□□□ -0.12
BEST3-201ENST00000266661 SLC26A6Q9BXS9 759 aa14.33□□□□□ -0.12
BEST3-201ENST00000266661 KRT23Q9C075 422 aa14.33□□□□□ -0.12
BEST3-201ENST00000266661 NAPBQ9H115 298 aa14.33□□□□□ -0.12
BEST3-201ENST00000266661 OGFRQ9NZT2 677 aa14.33□□□□□ -0.12
BEST3-201ENST00000266661 DDX41Q9UJV9 622 aaKnown RBP14.33□□□□□ -0.12
BEST3-201ENST00000266661 PCDHA5Q9Y5H7 936 aa14.33□□□□□ -0.12
BEST3-201ENST00000266661 SLC12A7Q9Y666 1083 aa14.33□□□□□ -0.12
BEST3-201ENST00000266661 ZNF831Q5JPB2 1677 aa14.32□□□□□ -0.12
BEST3-201ENST00000266661 BTBD18B2RXH4 712 aa14.32□□□□□ -0.12
BEST3-201ENST00000266661 TUBB4AP04350 444 aa14.32□□□□□ -0.12
BEST3-201ENST00000266661 PDE4BQ07343 736 aa14.32□□□□□ -0.12
BEST3-201ENST00000266661 NFXL1Q6ZNB6 911 aa14.32□□□□□ -0.12
BEST3-201ENST00000266661 VSTM4Q8IW00 320 aa14.32□□□□□ -0.12
BEST3-201ENST00000266661 LCORLQ8N3X6 602 aa14.32□□□□□ -0.12
BEST3-201ENST00000266661 KRI1Q8N9T8 703 aaKnown RBP14.32□□□□□ -0.12
BEST3-201ENST00000266661 FOXP1Q9H334 677 aaPredicted RBP14.32□□□□□ -0.12
BEST3-201ENST00000266661 INTS13Q9NVM9 706 aa14.32□□□□□ -0.12
BEST3-201ENST00000266661 SPDYE4A6NLX3 237 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms