RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 CSRNP1Q96S65 589 aa17.03■□□□□ 0.32
SSBP1-201ENST00000265304 NAPBQ9H115 298 aa17.03■□□□□ 0.32
SSBP1-201ENST00000265304 CTNNA3Q9UI47 895 aa17.03■□□□□ 0.32
SSBP1-201ENST00000265304 SCAF8Q9UPN6 1271 aaKnown RBP17.03■□□□□ 0.32
SSBP1-201ENST00000265304 U3KPZ7 1027 aaPredicted RBP17.03■□□□□ 0.32
SSBP1-201ENST00000265304 GREB1LQ9C091 1923 aaPredicted RBP17.02■□□□□ 0.32
SSBP1-201ENST00000265304 PHF20L1A8MW92 1017 aa17.02■□□□□ 0.32
SSBP1-201ENST00000265304 USP2O75604 605 aaPredicted RBP17.02■□□□□ 0.32
SSBP1-201ENST00000265304 REC8O95072 547 aa17.02■□□□□ 0.32
SSBP1-201ENST00000265304 APPP05067 770 aa17.02■□□□□ 0.32
SSBP1-201ENST00000265304 NT5C2P49902 561 aa17.02■□□□□ 0.32
SSBP1-201ENST00000265304 LDLRAD1Q5T700 205 aa17.02■□□□□ 0.32
SSBP1-201ENST00000265304 KIAA1211Q6ZU35 1233 aa17.02■□□□□ 0.32
SSBP1-201ENST00000265304 C16orf86Q6ZW13 317 aa17.02■□□□□ 0.32
SSBP1-201ENST00000265304 DNAJC18Q9H819 358 aa17.02■□□□□ 0.32
SSBP1-201ENST00000265304 SERPINB13Q9UIV8 391 aa17.02■□□□□ 0.32
SSBP1-201ENST00000265304 OTOFQ9HC10 1997 aa17.01■□□□□ 0.31
SSBP1-201ENST00000265304 POLR3DP05423 398 aaPredicted RBP17.01■□□□□ 0.31
SSBP1-201ENST00000265304 HLA-DOAP06340 250 aa17.01■□□□□ 0.31
SSBP1-201ENST00000265304 PCP11498 1178 aaKnown RBP17.01■□□□□ 0.31
SSBP1-201ENST00000265304 TDO2P48775 406 aa17.01■□□□□ 0.31
SSBP1-201ENST00000265304 TSGA10IPQ3SY00 556 aa17.01■□□□□ 0.31
SSBP1-201ENST00000265304 PRAMEF18Q5VWM3 479 aa17.01■□□□□ 0.31
SSBP1-201ENST00000265304 DCAF15Q66K64 600 aa17.01■□□□□ 0.31
SSBP1-201ENST00000265304 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
SSBP1-201ENST00000265304 KLRG1Q96E93 195 aa17.01■□□□□ 0.31
SSBP1-201ENST00000265304 SWAP70Q9UH65 585 aa17.01■□□□□ 0.31
SSBP1-201ENST00000265304 SAP30BPQ9UHR5 308 aaKnown RBP17.01■□□□□ 0.31
SSBP1-201ENST00000265304 CYP2D6P10635 497 aa17■□□□□ 0.31
SSBP1-201ENST00000265304 HOXD11P31277 338 aaPredicted RBP17■□□□□ 0.31
SSBP1-201ENST00000265304 NF2P35240 595 aa17■□□□□ 0.31
SSBP1-201ENST00000265304 EVX2Q03828 476 aa17■□□□□ 0.31
SSBP1-201ENST00000265304 FMR1Q06787 632 aaKnown RBP eCLIP17■□□□□ 0.31
SSBP1-201ENST00000265304 PPARAQ07869 468 aa17■□□□□ 0.31
SSBP1-201ENST00000265304 ZSCAN29Q8IWY8 852 aaPredicted RBP17■□□□□ 0.31
SSBP1-201ENST00000265304 AMOTL1Q8IY63 956 aa17■□□□□ 0.31
SSBP1-201ENST00000265304 IL17RAQ96F46 866 aa17■□□□□ 0.31
SSBP1-201ENST00000265304 USP26Q9BXU7 913 aa17■□□□□ 0.31
SSBP1-201ENST00000265304 NBPF3Q9H094 633 aa17■□□□□ 0.31
SSBP1-201ENST00000265304 GINM1Q9NU53 330 aa17■□□□□ 0.31
SSBP1-201ENST00000265304 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17■□□□□ 0.31
SSBP1-201ENST00000265304 ATAD5Q96QE3 1844 aa17■□□□□ 0.31
SSBP1-201ENST00000265304 PHIPQ8WWQ0 1821 aa16.99■□□□□ 0.31
SSBP1-201ENST00000265304 CYP2D7A0A087X1C5 515 aa16.99■□□□□ 0.31
SSBP1-201ENST00000265304 SMIM22K7EJ46 135 aa16.99■□□□□ 0.31
SSBP1-201ENST00000265304 ORC4O43929 436 aa16.99■□□□□ 0.31
SSBP1-201ENST00000265304 PPP1R12BO60237 982 aaPredicted RBP16.99■□□□□ 0.31
SSBP1-201ENST00000265304 SHMT1P34896 483 aa16.99■□□□□ 0.31
SSBP1-201ENST00000265304 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.99■□□□□ 0.317e-9■□□□□ 9.4
SSBP1-201ENST00000265304 ZNF341Q9BYN7 854 aa16.99■□□□□ 0.31
SSBP1-201ENST00000265304 RBM8AQ9Y5S9 174 aaKnown RBP16.99■□□□□ 0.31
SSBP1-201ENST00000265304 DOCK1Q14185 1865 aa16.99■□□□□ 0.31
SSBP1-201ENST00000265304 CYP21A2P08686 494 aa16.98■□□□□ 0.31
SSBP1-201ENST00000265304 CDK8P49336 464 aa16.98■□□□□ 0.31
SSBP1-201ENST00000265304 NOL9Q5SY16 702 aaKnown RBP16.98■□□□□ 0.31
SSBP1-201ENST00000265304 HHIPL1Q96JK4 782 aa16.98■□□□□ 0.31
SSBP1-201ENST00000265304 ANO2Q9NQ90 1003 aa16.98■□□□□ 0.31
SSBP1-201ENST00000265304 TACC3Q9Y6A5 838 aa16.98■□□□□ 0.31
SSBP1-201ENST00000265304 ZNF213O14771 459 aa16.97■□□□□ 0.31
SSBP1-201ENST00000265304 CTNND1O60716 968 aaKnown RBP16.97■□□□□ 0.31
SSBP1-201ENST00000265304 CELF2O95319 508 aaKnown RBP16.97■□□□□ 0.31
SSBP1-201ENST00000265304 HSPA4P34932 840 aa16.97■□□□□ 0.31
SSBP1-201ENST00000265304 IMMTQ16891 758 aaKnown RBP16.97■□□□□ 0.31
SSBP1-201ENST00000265304 STAG1Q8WVM7 1258 aa16.97■□□□□ 0.31
SSBP1-201ENST00000265304 CCDC17Q96LX7 622 aa16.97■□□□□ 0.31
SSBP1-201ENST00000265304 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.97■□□□□ 0.31
SSBP1-201ENST00000265304 ZNF287Q9HBT7 754 aa16.97■□□□□ 0.31
SSBP1-201ENST00000265304 GBA2Q9HCG7 927 aaPredicted RBP16.97■□□□□ 0.31
SSBP1-201ENST00000265304 MINDY4BA8MYZ0 360 aa16.96■□□□□ 0.31
SSBP1-201ENST00000265304 SEC24BO95487 1268 aa16.96■□□□□ 0.31
SSBP1-201ENST00000265304 SLC3A2P08195 630 aaKnown RBP16.96■□□□□ 0.31
SSBP1-201ENST00000265304 CAP2P40123 477 aa16.96■□□□□ 0.31
SSBP1-201ENST00000265304 MAP3K9P80192 1104 aa16.96■□□□□ 0.31
SSBP1-201ENST00000265304 RRP1BQ14684 758 aaKnown RBP16.96■□□□□ 0.31
SSBP1-201ENST00000265304 AKNAD1Q5T1N1 836 aa16.96■□□□□ 0.31
SSBP1-201ENST00000265304 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.96■□□□□ 0.31
SSBP1-201ENST00000265304 MIGA2Q7L4E1 593 aa16.96■□□□□ 0.31
SSBP1-201ENST00000265304 ARMC9Q7Z3E5 817 aa16.96■□□□□ 0.31
SSBP1-201ENST00000265304 DYNLL2Q96FJ2 89 aa16.96■□□□□ 0.31
SSBP1-201ENST00000265304 BACH2Q9BYV9 841 aa16.96■□□□□ 0.31
SSBP1-201ENST00000265304 SLC27A2O14975 620 aa16.95■□□□□ 0.3
SSBP1-201ENST00000265304 SLURP2P0DP57 97 aa16.95■□□□□ 0.3
SSBP1-201ENST00000265304 RASA1P20936 1047 aa16.95■□□□□ 0.3
SSBP1-201ENST00000265304 IREB2P48200 963 aaKnown RBP16.95■□□□□ 0.3
SSBP1-201ENST00000265304 PDE4BQ07343 736 aa16.95■□□□□ 0.3
SSBP1-201ENST00000265304 CREB3L3Q68CJ9 461 aa16.95■□□□□ 0.3
SSBP1-201ENST00000265304 SAPCD2Q86UD0 394 aa16.95■□□□□ 0.3
SSBP1-201ENST00000265304 C2orf69Q8N8R5 385 aa16.95■□□□□ 0.3
SSBP1-201ENST00000265304 RNF41Q9H4P4 317 aaPredicted RBP16.95■□□□□ 0.3
SSBP1-201ENST00000265304 PTPRFP10586 1907 aa16.95■□□□□ 0.3
SSBP1-201ENST00000265304 PLIN4Q96Q06 1357 aa16.94■□□□□ 0.3
SSBP1-201ENST00000265304 TMEM88BA6NKF7 163 aa16.94■□□□□ 0.3
SSBP1-201ENST00000265304 NOVP48745 357 aa16.94■□□□□ 0.3
SSBP1-201ENST00000265304 APLP1P51693 650 aa16.94■□□□□ 0.3
SSBP1-201ENST00000265304 TBC1D10CQ8IV04 446 aa16.94■□□□□ 0.3
SSBP1-201ENST00000265304 ANKRD13AQ8IZ07 590 aa16.94■□□□□ 0.3
SSBP1-201ENST00000265304 CRACR2BQ8N4Y2 399 aaPredicted RBP16.94■□□□□ 0.3
SSBP1-201ENST00000265304 SLC44A5Q8NCS7 719 aa16.94■□□□□ 0.3
SSBP1-201ENST00000265304 TLL2Q9Y6L7 1015 aa16.94■□□□□ 0.3
SSBP1-201ENST00000265304 CTDSPL2Q05D32 466 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms