RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 LRRC59Q96AG4 307 aaKnown RBP16.93■□□□□ 0.3
CASC3-201ENST00000264645 SELENOOQ9BVL4 669 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 BLZF1Q9H2G9 400 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 AMOTL2Q9Y2J4 779 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 EPN1Q9Y6I3 576 aaPredicted RBP16.93■□□□□ 0.3
CASC3-201ENST00000264645 KRT23Q9C075 422 aa16.92■□□□□ 0.3
CASC3-201ENST00000264645 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
CASC3-201ENST00000264645 G3V3G9 751 aa16.92■□□□□ 0.3
CASC3-201ENST00000264645 CCDC6Q16204 474 aa16.92■□□□□ 0.3
CASC3-201ENST00000264645 BEND3Q5T5X7 828 aa16.92■□□□□ 0.3
CASC3-201ENST00000264645 DCAF8Q5TAQ9 597 aa16.92■□□□□ 0.3
CASC3-201ENST00000264645 NYAP1Q6ZVC0 841 aa16.92■□□□□ 0.3
CASC3-201ENST00000264645 SAMSN1Q9NSI8 373 aaKnown RBP16.92■□□□□ 0.3
CASC3-201ENST00000264645 ODF2LQ9ULJ1 636 aa16.92■□□□□ 0.3
CASC3-201ENST00000264645 RBL2Q08999 1139 aa16.92■□□□□ 0.3
CASC3-201ENST00000264645 FMNL3Q8IVF7 1028 aa16.92■□□□□ 0.3
CASC3-201ENST00000264645 DHX40Q8IX18 779 aaKnown RBP16.92■□□□□ 0.3
CASC3-201ENST00000264645 KLHL7Q8IXQ5 586 aa16.92■□□□□ 0.3
CASC3-201ENST00000264645 EEF2KMTQ96G04 330 aa16.92■□□□□ 0.3
CASC3-201ENST00000264645 CALML4Q96GE6 196 aa16.92■□□□□ 0.3
CASC3-201ENST00000264645 IL25Q9H293 177 aa16.92■□□□□ 0.3
CASC3-201ENST00000264645 CPSF2Q9P2I0 782 aaKnown RBP16.92■□□□□ 0.3
CASC3-201ENST00000264645 CCDC51Q96ER9 411 aa16.91■□□□□ 0.3
CASC3-201ENST00000264645 TACO1Q9BSH4 297 aaKnown RBP16.91■□□□□ 0.3
CASC3-201ENST00000264645 IRX2Q9BZI1 471 aaPredicted RBP16.91■□□□□ 0.3
CASC3-201ENST00000264645 DDX21Q9NR30 783 aaKnown RBP eCLIP16.91■□□□□ 0.3
CASC3-201ENST00000264645 ATP10AO60312 1499 aa16.91■□□□□ 0.3
CASC3-201ENST00000264645 SNRPA1P09661 255 aaKnown RBP16.91■□□□□ 0.3
CASC3-201ENST00000264645 TOB2Q14106 344 aaPredicted RBP16.91■□□□□ 0.3
CASC3-201ENST00000264645 SLC39A14Q15043 492 aa16.91■□□□□ 0.3
CASC3-201ENST00000264645 TMTC2Q8N394 836 aa16.91■□□□□ 0.3
CASC3-201ENST00000264645 IL17REQ8NFR9 667 aa16.91■□□□□ 0.3
CASC3-201ENST00000264645 FBF1Q8TES7 1133 aa16.91■□□□□ 0.3
CASC3-201ENST00000264645 NOC4LQ9BVI4 516 aaKnown RBP16.91■□□□□ 0.3
CASC3-201ENST00000264645 HAUS4Q9H6D7 363 aa16.91■□□□□ 0.3
CASC3-201ENST00000264645 GJB4Q9NTQ9 266 aa16.91■□□□□ 0.3
CASC3-201ENST00000264645 KIF5BP33176 963 aa16.91■□□□□ 0.3
CASC3-201ENST00000264645 MAGEA1P43355 309 aa16.91■□□□□ 0.3
CASC3-201ENST00000264645 IKQ13123 557 aaPredicted RBP16.91■□□□□ 0.3
CASC3-201ENST00000264645 NCAPGQ9BPX3 1015 aa16.91■□□□□ 0.3
CASC3-201ENST00000264645 PAIP2Q9BPZ3 127 aaKnown RBP16.91■□□□□ 0.3
CASC3-201ENST00000264645 FAM169AQ9Y6X4 670 aa16.91■□□□□ 0.3
CASC3-201ENST00000264645 ADCY9O60503 1353 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 SLC4A8Q2Y0W8 1093 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 TAOK3Q9H2K8 898 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 TTC37Q6PGP7 1564 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 AKAP4Q5JQC9 854 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 CCDC50Q8IVM0 306 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 TSGA10Q9BZW7 698 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 CNNM2Q9H8M5 875 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 POLR3EQ9NVU0 708 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 ADAMTS12P58397 1594 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 KCNQ3O43525 872 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 KRT2P35908 639 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 PAK2Q13177 524 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 PPP1R7Q15435 360 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 CSGALNACT2Q8N6G5 542 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 CTNNBL1Q8WYA6 563 aaPredicted RBP16.9■□□□□ 0.3
CASC3-201ENST00000264645 C19orf44Q9H6X5 657 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 FHOD1Q9Y613 1164 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 CARMIL3Q8ND23 1372 aa16.9■□□□□ 0.3
CASC3-201ENST00000264645 BTBD18B2RXH4 712 aa16.89■□□□□ 0.3
CASC3-201ENST00000264645 GOLGA8KD6RF30 607 aa16.89■□□□□ 0.3
CASC3-201ENST00000264645 GPAA1O43292 621 aa16.89■□□□□ 0.3
CASC3-201ENST00000264645 ZPR1O75312 459 aa16.89■□□□□ 0.3
CASC3-201ENST00000264645 HSPD1P10809 573 aaKnown RBP16.89■□□□□ 0.3
CASC3-201ENST00000264645 GRAMD1CQ8IYS0 662 aa16.89■□□□□ 0.3
CASC3-201ENST00000264645 TCEAL9Q9UHQ7 104 aa16.89■□□□□ 0.3
CASC3-201ENST00000264645 RIPOR2Q9Y4F9 1068 aa16.89■□□□□ 0.3
CASC3-201ENST00000264645 EDC4Q6P2E9 1401 aaKnown RBP16.89■□□□□ 0.29
CASC3-201ENST00000264645 TBC1D31Q96DN5 1066 aa16.89■□□□□ 0.29
CASC3-201ENST00000264645 FUCA2Q9BTY2 467 aa16.89■□□□□ 0.29
CASC3-201ENST00000264645 TRIM31Q9BZY9 425 aa16.89■□□□□ 0.29
CASC3-201ENST00000264645 SLC4A4Q9Y6R1 1079 aa16.89■□□□□ 0.29
CASC3-201ENST00000264645 ANKRD18BA2A2Z9 1011 aa16.89■□□□□ 0.29
CASC3-201ENST00000264645 NEDD9Q14511 834 aa16.89■□□□□ 0.29
CASC3-201ENST00000264645 IFIT1BQ5T764 474 aaKnown RBP16.89■□□□□ 0.29
CASC3-201ENST00000264645 DSCC1Q9BVC3 393 aa16.89■□□□□ 0.29
CASC3-201ENST00000264645 SSR1P43307 286 aaKnown RBP16.89■□□□□ 0.29
CASC3-201ENST00000264645 IQSEC3Q9UPP2 1182 aaPredicted RBP16.89■□□□□ 0.29
CASC3-201ENST00000264645 hCG_1642624A0A1W2PR95 340 aa16.88■□□□□ 0.29
CASC3-201ENST00000264645 IFI16Q16666 785 aaKnown RBP16.88■□□□□ 0.29
CASC3-201ENST00000264645 SPATA1Q5VX52 437 aa16.88■□□□□ 0.29
CASC3-201ENST00000264645 NELFBQ8WX92 580 aa16.88■□□□□ 0.29
CASC3-201ENST00000264645 ESR2Q92731 530 aa16.88■□□□□ 0.29
CASC3-201ENST00000264645 N4BP2L2Q92802 583 aaPredicted RBP16.88■□□□□ 0.29
CASC3-201ENST00000264645 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
CASC3-201ENST00000264645 SMYD4Q8IYR2 804 aaPredicted RBP16.88■□□□□ 0.29
CASC3-201ENST00000264645 ZNF594Q96JF6 807 aaPredicted RBP16.88■□□□□ 0.29
CASC3-201ENST00000264645 IFIH1Q9BYX4 1025 aaKnown RBP16.88■□□□□ 0.29
CASC3-201ENST00000264645 MKNK2Q9HBH9 465 aa16.88■□□□□ 0.29
CASC3-201ENST00000264645 POLR1AO95602 1720 aaPredicted RBP16.88■□□□□ 0.29
CASC3-201ENST00000264645 MRPS25P82663 173 aaKnown RBP16.88■□□□□ 0.29
CASC3-201ENST00000264645 FMR1NBQ8N0W7 255 aaPredicted RBP16.88■□□□□ 0.29
CASC3-201ENST00000264645 ANKRD13CQ8N6S4 541 aa16.88■□□□□ 0.29
CASC3-201ENST00000264645 VAT1LQ9HCJ6 419 aa16.88■□□□□ 0.29
CASC3-201ENST00000264645 PHF8Q9UPP1 1060 aa16.88■□□□□ 0.29
CASC3-201ENST00000264645 KRT13P13646 458 aa16.87■□□□□ 0.29
CASC3-201ENST00000264645 EIF4A1P60842 406 aaKnown RBP16.87■□□□□ 0.29
CASC3-201ENST00000264645 LACTBP83111 547 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 3660.4 ms