RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 PSD3Q9NYI0 1048 aa18.36■□□□□ 0.53
GPC1-201ENST00000264039 BAIAP2L1Q9UHR4 511 aa18.36■□□□□ 0.53
GPC1-201ENST00000264039 PLEKHG2Q9H7P9 1386 aa18.36■□□□□ 0.53
GPC1-201ENST00000264039 CPSF1Q10570 1443 aaKnown RBP18.36■□□□□ 0.53
GPC1-201ENST00000264039 EIF4A1P60842 406 aaKnown RBP18.36■□□□□ 0.53
GPC1-201ENST00000264039 YY1AP1Q9H869 796 aa18.36■□□□□ 0.53
GPC1-201ENST00000264039 WWC3Q9ULE0 1092 aa18.36■□□□□ 0.53
GPC1-201ENST00000264039 REREQ9P2R6 1566 aa18.35■□□□□ 0.53
GPC1-201ENST00000264039 KRT86O43790 486 aa18.35■□□□□ 0.53
GPC1-201ENST00000264039 CKAP4Q07065 602 aaKnown RBP18.35■□□□□ 0.53
GPC1-201ENST00000264039 SLC9C2Q5TAH2 1124 aa18.35■□□□□ 0.53
GPC1-201ENST00000264039 RSRC2Q7L4I2 434 aaKnown RBP18.35■□□□□ 0.53
GPC1-201ENST00000264039 JAKMIP2Q96AA8 810 aa18.35■□□□□ 0.53
GPC1-201ENST00000264039 SIRT1Q96EB6 747 aa18.35■□□□□ 0.53
GPC1-201ENST00000264039 CD248Q9HCU0 757 aa18.35■□□□□ 0.53
GPC1-201ENST00000264039 NLRP2Q9NX02 1062 aa18.35■□□□□ 0.53
GPC1-201ENST00000264039 MAN1B1Q9UKM7 699 aa18.35■□□□□ 0.53
GPC1-201ENST00000264039 KLHL34Q8N239 644 aa18.35■□□□□ 0.53
GPC1-201ENST00000264039 ERCC6L2Q5T890 1561 aa18.35■□□□□ 0.53
GPC1-201ENST00000264039 EXOC5O00471 708 aa18.35■□□□□ 0.53
GPC1-201ENST00000264039 AKR1B10O60218 316 aa18.35■□□□□ 0.53
GPC1-201ENST00000264039 A1BGP04217 495 aa18.35■□□□□ 0.53
GPC1-201ENST00000264039 KIF23Q02241 960 aaPredicted RBP18.35■□□□□ 0.53
GPC1-201ENST00000264039 B4GALNT4Q76KP1 1039 aa18.35■□□□□ 0.53
GPC1-201ENST00000264039 PNMA8AQ86V59 439 aaPredicted RBP18.35■□□□□ 0.53
GPC1-201ENST00000264039 DIS3L2Q8IYB7 885 aaKnown RBP18.35■□□□□ 0.53
GPC1-201ENST00000264039 SH2D3CQ8N5H7 860 aa18.35■□□□□ 0.53
GPC1-201ENST00000264039 EDC4Q6P2E9 1401 aaKnown RBP18.34■□□□□ 0.53
GPC1-201ENST00000264039 CDC42BPBQ9Y5S2 1711 aa18.34■□□□□ 0.53
GPC1-201ENST00000264039 BACH1O14867 736 aa18.34■□□□□ 0.53
GPC1-201ENST00000264039 TDRD12Q587J7 1177 aaKnown RBP18.34■□□□□ 0.53
GPC1-201ENST00000264039 VEZTQ9HBM0 779 aa18.34■□□□□ 0.53
GPC1-201ENST00000264039 FAM53CQ9NYF3 392 aa18.34■□□□□ 0.53
GPC1-201ENST00000264039 KIF5AQ12840 1032 aa18.34■□□□□ 0.53
GPC1-201ENST00000264039 PTPROQ16827 1216 aa18.34■□□□□ 0.53
GPC1-201ENST00000264039 CYP26C1Q6V0L0 522 aa18.34■□□□□ 0.53
GPC1-201ENST00000264039 TMTC1Q8IUR5 882 aa18.34■□□□□ 0.53
GPC1-201ENST00000264039 ADGRB2O60241 1585 aa18.34■□□□□ 0.53
GPC1-201ENST00000264039 EIF4E1BA6NMX2 242 aaKnown RBP18.34■□□□□ 0.53
GPC1-201ENST00000264039 SMARCC2Q8TAQ2 1214 aa18.34■□□□□ 0.53
GPC1-201ENST00000264039 TRIM47Q96LD4 638 aa18.34■□□□□ 0.53
GPC1-201ENST00000264039 CTAGE1Q96RT6 745 aa18.34■□□□□ 0.53
GPC1-201ENST00000264039 UHRF1BP1LA0JNW5 1464 aa18.34■□□□□ 0.53
GPC1-201ENST00000264039 TUBBP07437 444 aa18.33■□□□□ 0.53
GPC1-201ENST00000264039 CDC27P30260 824 aa18.33■□□□□ 0.53
GPC1-201ENST00000264039 CYP27A1Q02318 531 aa18.33■□□□□ 0.53
GPC1-201ENST00000264039 NBPF6Q5VWK0 638 aa18.33■□□□□ 0.53
GPC1-201ENST00000264039 SHC4Q6S5L8 630 aa18.33■□□□□ 0.53
GPC1-201ENST00000264039 NBPF4Q96M43 638 aa18.33■□□□□ 0.53
GPC1-201ENST00000264039 ANKRD13DQ6ZTN6 518 aa18.33■□□□□ 0.52
GPC1-201ENST00000264039 SELENOOQ9BVL4 669 aa18.33■□□□□ 0.52
GPC1-201ENST00000264039 QRICH2Q9H0J4 1663 aa18.33■□□□□ 0.52
GPC1-201ENST00000264039 SBNO1A3KN83 1393 aa18.33■□□□□ 0.52
GPC1-201ENST00000264039 MROH7-TTC4A0A0A0MT08 1334 aa18.33■□□□□ 0.52
GPC1-201ENST00000264039 FANCGO15287 622 aa18.33■□□□□ 0.52
GPC1-201ENST00000264039 SCP2P22307 547 aa18.33■□□□□ 0.52
GPC1-201ENST00000264039 ANKRD24Q8TF21 1146 aa18.33■□□□□ 0.52
GPC1-201ENST00000264039 ZNF274Q96GC6 653 aaPredicted RBP18.33■□□□□ 0.52
GPC1-201ENST00000264039 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.33■□□□□ 0.52
GPC1-201ENST00000264039 PREX2Q70Z35 1606 aa18.32■□□□□ 0.52
GPC1-201ENST00000264039 COL3A1P02461 1466 aaPredicted RBP18.32■□□□□ 0.52
GPC1-201ENST00000264039 SMIM23A6NLE4 172 aa18.32■□□□□ 0.52
GPC1-201ENST00000264039 RNF113AO15541 343 aaKnown RBP18.32■□□□□ 0.52
GPC1-201ENST00000264039 ZBTB3Q9H5J0 574 aa18.32■□□□□ 0.52
GPC1-201ENST00000264039 EPN1Q9Y6I3 576 aaPredicted RBP18.32■□□□□ 0.52
GPC1-201ENST00000264039 XBP1P17861 261 aa18.32■□□□□ 0.52
GPC1-201ENST00000264039 ATP5JP18859 108 aa18.32■□□□□ 0.52
GPC1-201ENST00000264039 GCKP35557 465 aa18.32■□□□□ 0.52
GPC1-201ENST00000264039 MTIF2P46199 727 aaKnown RBP18.32■□□□□ 0.52
GPC1-201ENST00000264039 SARNPP82979 210 aaKnown RBP18.32■□□□□ 0.52
GPC1-201ENST00000264039 METTL16Q86W50 562 aaKnown RBP18.32■□□□□ 0.52
GPC1-201ENST00000264039 TACO1Q9BSH4 297 aaKnown RBP18.32■□□□□ 0.52
GPC1-201ENST00000264039 MINDY4BA8MYZ0 360 aa18.32■□□□□ 0.52
GPC1-201ENST00000264039 ABCC3O15438 1527 aa18.31■□□□□ 0.52
GPC1-201ENST00000264039 ZNF185O15231 689 aa18.31■□□□□ 0.52
GPC1-201ENST00000264039 FDPSP14324 419 aaKnown RBP18.31■□□□□ 0.52
GPC1-201ENST00000264039 PPFIA1Q13136 1202 aa18.31■□□□□ 0.52
GPC1-201ENST00000264039 CCDC57Q2TAC2 916 aa18.31■□□□□ 0.52
GPC1-201ENST00000264039 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.31■□□□□ 0.52
GPC1-201ENST00000264039 IRAK1P51617 712 aa18.31■□□□□ 0.52
GPC1-201ENST00000264039 VAV2P52735 878 aa18.31■□□□□ 0.52
GPC1-201ENST00000264039 ARID5AQ03989 594 aa18.31■□□□□ 0.52
GPC1-201ENST00000264039 PPARAQ07869 468 aa18.31■□□□□ 0.52
GPC1-201ENST00000264039 ZNF174Q15697 407 aa18.31■□□□□ 0.52
GPC1-201ENST00000264039 EPHA10Q5JZY3 1008 aa18.31■□□□□ 0.52
GPC1-201ENST00000264039 CPLX4Q7Z7G2 160 aa18.31■□□□□ 0.52
GPC1-201ENST00000264039 ATP7AQ04656 1500 aa18.31■□□□□ 0.52
GPC1-201ENST00000264039 USO1O60763 962 aaKnown RBP18.31■□□□□ 0.52
GPC1-201ENST00000264039 ABL1P00519 1130 aa18.31■□□□□ 0.52
GPC1-201ENST00000264039 CCDC178Q5BJE1 867 aa18.31■□□□□ 0.52
GPC1-201ENST00000264039 CCDC42Q96M95 316 aa18.31■□□□□ 0.52
GPC1-201ENST00000264039 MMS19Q96T76 1030 aa18.31■□□□□ 0.52
GPC1-201ENST00000264039 A0A1B0GUA9 196 aa18.3■□□□□ 0.52
GPC1-201ENST00000264039 KIF4AO95239 1232 aa18.3■□□□□ 0.52
GPC1-201ENST00000264039 KCNJ6P48051 423 aa18.3■□□□□ 0.52
GPC1-201ENST00000264039 SPHKAPQ2M3C7 1700 aa18.3■□□□□ 0.52
GPC1-201ENST00000264039 PPP1R12BO60237 982 aaPredicted RBP18.3■□□□□ 0.52
GPC1-201ENST00000264039 FGAP02671 866 aa18.3■□□□□ 0.52
GPC1-201ENST00000264039 NEDD9Q14511 834 aa18.3■□□□□ 0.52
GPC1-201ENST00000264039 CYLC1P35663 651 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms