RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 MS4A4AQ96JQ5 239 aa25.68■■□□□ 1.7
CCNE1-201ENST00000262643 RIOK1Q9BRS2 568 aaKnown RBP25.68■■□□□ 1.7
CCNE1-201ENST00000262643 LAMB1P07942 1786 aa25.67■■□□□ 1.7
CCNE1-201ENST00000262643 DHX36Q9H2U1 1008 aaKnown RBP25.67■■□□□ 1.7
CCNE1-201ENST00000262643 CHGBP05060 677 aa25.66■■□□□ 1.7
CCNE1-201ENST00000262643 ADD2P35612 726 aa25.66■■□□□ 1.7
CCNE1-201ENST00000262643 GTF2A2P52657 109 aa25.66■■□□□ 1.7
CCNE1-201ENST00000262643 NOL9Q5SY16 702 aaKnown RBP25.66■■□□□ 1.7
CCNE1-201ENST00000262643 PI4KBQ9UBF8 816 aa25.66■■□□□ 1.7
CCNE1-201ENST00000262643 TBC1D12O60347 775 aa25.66■■□□□ 1.7
CCNE1-201ENST00000262643 PPATQ06203 517 aa25.66■■□□□ 1.7
CCNE1-201ENST00000262643 PPIL2Q13356 520 aa25.66■■□□□ 1.7
CCNE1-201ENST00000262643 PTPN18Q99952 460 aa25.66■■□□□ 1.7
CCNE1-201ENST00000262643 TTC41PQ6P2S7 1318 aa25.65■■□□□ 1.7
CCNE1-201ENST00000262643 CCL15-CCL14A0A0B4J2E2 113 aa25.65■■□□□ 1.7
CCNE1-201ENST00000262643 CCL15Q16663 113 aa25.65■■□□□ 1.7
CCNE1-201ENST00000262643 PLEKHM2Q8IWE5 1019 aa25.65■■□□□ 1.7
CCNE1-201ENST00000262643 SCYL3Q8IZE3 742 aa25.65■■□□□ 1.7
CCNE1-201ENST00000262643 ALDH1A1P00352 501 aa25.64■■□□□ 1.7
CCNE1-201ENST00000262643 BRI3BPQ8WY22 251 aa25.64■■□□□ 1.7
CCNE1-201ENST00000262643 PICK1Q9NRD5 415 aa25.64■■□□□ 1.7
CCNE1-201ENST00000262643 MYH7P12883 1935 aa25.64■■□□□ 1.7
CCNE1-201ENST00000262643 TESPA1A2RU30 521 aaPredicted RBP25.64■■□□□ 1.69
CCNE1-201ENST00000262643 MX1P20591 662 aa25.64■■□□□ 1.69
CCNE1-201ENST00000262643 OTUD7BQ6GQQ9 843 aa25.64■■□□□ 1.69
CCNE1-201ENST00000262643 ERC2O15083 957 aa25.63■■□□□ 1.69
CCNE1-201ENST00000262643 SNAPC2Q13487 334 aa25.63■■□□□ 1.69
CCNE1-201ENST00000262643 LCORLQ8N3X6 602 aa25.63■■□□□ 1.69
CCNE1-201ENST00000262643 HERC5Q9UII4 1024 aaKnown RBP25.63■■□□□ 1.69
CCNE1-201ENST00000262643 MYH1P12882 1939 aa25.63■■□□□ 1.69
CCNE1-201ENST00000262643 CTNND1O60716 968 aaKnown RBP25.63■■□□□ 1.69
CCNE1-201ENST00000262643 CRNKL1Q9BZJ0 848 aaKnown RBP25.63■■□□□ 1.69
CCNE1-201ENST00000262643 R3HDMLQ9H3Y0 253 aa25.63■■□□□ 1.69
CCNE1-201ENST00000262643 ARMT1Q9H993 441 aa25.63■■□□□ 1.69
CCNE1-201ENST00000262643 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.63■■□□□ 1.69
CCNE1-201ENST00000262643 SIPA1L1O43166 1804 aa25.62■■□□□ 1.69
CCNE1-201ENST00000262643 HLA-DOAP06340 250 aa25.62■■□□□ 1.69
CCNE1-201ENST00000262643 CRACR2BQ8N4Y2 399 aaPredicted RBP25.62■■□□□ 1.69
CCNE1-201ENST00000262643 PI4K2BQ8TCG2 481 aa25.62■■□□□ 1.69
CCNE1-201ENST00000262643 TRIM34Q9BYJ4 488 aa25.62■■□□□ 1.69
CCNE1-201ENST00000262643 ZHX2Q9Y6X8 837 aa25.62■■□□□ 1.69
CCNE1-201ENST00000262643 CETPP11597 493 aa25.61■■□□□ 1.69
CCNE1-201ENST00000262643 ZSCAN25Q6NSZ9 544 aa25.61■■□□□ 1.69
CCNE1-201ENST00000262643 DOCK1Q14185 1865 aa25.61■■□□□ 1.69
CCNE1-201ENST00000262643 GLRX3O76003 335 aaKnown RBP25.61■■□□□ 1.69
CCNE1-201ENST00000262643 MBD4O95243 580 aa25.61■■□□□ 1.69
CCNE1-201ENST00000262643 PTPRAP18433 802 aa25.61■■□□□ 1.69
CCNE1-201ENST00000262643 UBE3CQ15386 1083 aa25.61■■□□□ 1.69
CCNE1-201ENST00000262643 KBTBD3Q8NAB2 608 aa25.61■■□□□ 1.69
CCNE1-201ENST00000262643 SDR42E1Q8WUS8 393 aa25.61■■□□□ 1.69
CCNE1-201ENST00000262643 SEC24BO95487 1268 aa25.6■■□□□ 1.69
CCNE1-201ENST00000262643 CCDC84Q86UT8 332 aaPredicted RBP25.6■■□□□ 1.69
CCNE1-201ENST00000262643 RRP1BQ14684 758 aaKnown RBP25.59■■□□□ 1.69
CCNE1-201ENST00000262643 FOXP4Q8IVH2 680 aaPredicted RBP25.59■■□□□ 1.69
CCNE1-201ENST00000262643 DNAJC18Q9H819 358 aa25.59■■□□□ 1.69
CCNE1-201ENST00000262643 SALL3Q9BXA9 1300 aa25.59■■□□□ 1.69
CCNE1-201ENST00000262643 FAM43AQ8N2R8 423 aa25.59■■□□□ 1.69
CCNE1-201ENST00000262643 GPR25O00155 361 aa25.58■■□□□ 1.69
CCNE1-201ENST00000262643 BMP2KLQ5H9B9 411 aa25.58■■□□□ 1.69
CCNE1-201ENST00000262643 ZNF296Q8WUU4 475 aaPredicted RBP25.58■■□□□ 1.69
CCNE1-201ENST00000262643 CFHR5Q9BXR6 569 aa25.58■■□□□ 1.69
CCNE1-201ENST00000262643 KCNH4Q9UQ05 1017 aa25.58■■□□□ 1.69
CCNE1-201ENST00000262643 CAP2P40123 477 aa25.58■■□□□ 1.68
CCNE1-201ENST00000262643 CRHR2Q13324 411 aa25.58■■□□□ 1.68
CCNE1-201ENST00000262643 PUS7LQ9H0K6 701 aaKnown RBP25.58■■□□□ 1.68
CCNE1-201ENST00000262643 MCM9Q9NXL9 1143 aa25.58■■□□□ 1.68
CCNE1-201ENST00000262643 NAV1Q8NEY1 1877 aa25.57■■□□□ 1.68
CCNE1-201ENST00000262643 BTBD19C9JJ37 291 aa25.57■■□□□ 1.68
CCNE1-201ENST00000262643 PRKAB2O43741 272 aa25.57■■□□□ 1.68
CCNE1-201ENST00000262643 POLR3DP05423 398 aaPredicted RBP25.56■■□□□ 1.68
CCNE1-201ENST00000262643 TTC6Q86TZ1 520 aa25.56■■□□□ 1.68
CCNE1-201ENST00000262643 METTL16Q86W50 562 aaKnown RBP25.56■■□□□ 1.68
CCNE1-201ENST00000262643 ATAD5Q96QE3 1844 aa25.56■■□□□ 1.68
CCNE1-201ENST00000262643 TAF1CQ15572 869 aaPredicted RBP25.56■■□□□ 1.68
CCNE1-201ENST00000262643 DCP1AQ9NPI6 582 aaPredicted RBP25.56■■□□□ 1.68
CCNE1-201ENST00000262643 SERPINB13Q9UIV8 391 aa25.56■■□□□ 1.68
CCNE1-201ENST00000262643 AFG3L2Q9Y4W6 797 aa25.56■■□□□ 1.68
CCNE1-201ENST00000262643 TRIM75PA6NK02 468 aa25.55■■□□□ 1.68
CCNE1-201ENST00000262643 GSPT1P15170 499 aaKnown RBP25.55■■□□□ 1.68
CCNE1-201ENST00000262643 PLCD1P51178 756 aa25.55■■□□□ 1.68
CCNE1-201ENST00000262643 PDE1AP54750 535 aa25.55■■□□□ 1.68
CCNE1-201ENST00000262643 CXCL11O14625 94 aa25.54■■□□□ 1.68
CCNE1-201ENST00000262643 RNF113AO15541 343 aaKnown RBP25.54■■□□□ 1.68
CCNE1-201ENST00000262643 GDF11O95390 407 aa25.54■■□□□ 1.68
CCNE1-201ENST00000262643 IFFO2Q5TF58 517 aa25.54■■□□□ 1.68
CCNE1-201ENST00000262643 FSD1Q9BTV5 496 aa25.54■■□□□ 1.68
CCNE1-201ENST00000262643 PHIPQ8WWQ0 1821 aa25.54■■□□□ 1.68
CCNE1-201ENST00000262643 SHROOM1Q2M3G4 852 aaPredicted RBP25.54■■□□□ 1.68
CCNE1-201ENST00000262643 STAP2Q9UGK3 403 aa25.54■■□□□ 1.68
CCNE1-201ENST00000262643 DDX60LQ5H9U9 1706 aaKnown RBP25.54■■□□□ 1.68
CCNE1-201ENST00000262643 DGKZQ13574 1117 aa25.53■■□□□ 1.68
CCNE1-201ENST00000262643 TTC22Q5TAA0 569 aa25.53■■□□□ 1.68
CCNE1-201ENST00000262643 SLC4A4Q9Y6R1 1079 aa25.53■■□□□ 1.68
CCNE1-201ENST00000262643 ZFYP08048 801 aaPredicted RBP25.53■■□□□ 1.68
CCNE1-201ENST00000262643 EVX2Q03828 476 aa25.53■■□□□ 1.68
CCNE1-201ENST00000262643 NOM1Q5C9Z4 860 aaKnown RBP25.53■■□□□ 1.68
CCNE1-201ENST00000262643 APPBP2Q92624 585 aa25.53■■□□□ 1.68
CCNE1-201ENST00000262643 OSBP2Q969R2 916 aa25.53■■□□□ 1.68
CCNE1-201ENST00000262643 EHD4Q9H223 541 aa25.53■■□□□ 1.68
CCNE1-201ENST00000262643 ZFYVE28Q9HCC9 887 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms