RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 MTERF4Q7Z6M4 381 aaKnown RBP9.42□□□□□ -0.9
PTPN3-201ENST00000262539 NSUN7Q8NE18 718 aaKnown RBP9.42□□□□□ -0.9
PTPN3-201ENST00000262539 UFL1O94874 794 aa9.42□□□□□ -0.9
PTPN3-201ENST00000262539 MYL1P05976 194 aa9.42□□□□□ -0.9
PTPN3-201ENST00000262539 MCAMP43121 646 aa9.42□□□□□ -0.9
PTPN3-201ENST00000262539 ITPK1Q13572 414 aa9.42□□□□□ -0.9
PTPN3-201ENST00000262539 RMND1Q9NWS8 449 aa9.42□□□□□ -0.9
PTPN3-201ENST00000262539 MINPP1Q9UNW1 487 aa9.42□□□□□ -0.9
PTPN3-201ENST00000262539 BMP2KQ9NSY1 1161 aaPredicted RBP9.41□□□□□ -0.9
PTPN3-201ENST00000262539 RXRBP28702 533 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 FOXP1Q9H334 677 aaPredicted RBP9.41□□□□□ -0.9
PTPN3-201ENST00000262539 CLSTN2Q9H4D0 955 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 C6orf50Q9HD87 102 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 TPCN1Q9ULQ1 816 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 NPM3O75607 178 aaKnown RBP9.41□□□□□ -0.9
PTPN3-201ENST00000262539 SSBP05455 408 aaKnown RBP eCLIP9.41□□□□□ -0.9
PTPN3-201ENST00000262539 MICU3Q86XE3 530 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 ELOA2Q8IYF1 753 aaPredicted RBP9.41□□□□□ -0.9
PTPN3-201ENST00000262539 VTI1AQ96AJ9 217 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 IQCDQ96DY2 449 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 PODXL2Q9NZ53 605 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 BCL9LQ86UU0 1499 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 ESPNB1AK53 854 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 LAD1O00515 517 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 TXNRD1Q16881 649 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 FERMT3Q86UX7 667 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 VGLL2Q8N8G2 317 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 FANCBQ8NB91 859 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 H0YIN7 160 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 TNIP1Q15025 636 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 ZRSR2Q15696 482 aaKnown RBP9.41□□□□□ -0.9
PTPN3-201ENST00000262539 FILIP1LQ4L180 1135 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 MASTLQ96GX5 879 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 SYNPO2Q9UMS6 1093 aa9.41□□□□□ -0.9
PTPN3-201ENST00000262539 POLD1P28340 1107 aa9.4□□□□□ -0.9
PTPN3-201ENST00000262539 AMPD3Q01432 767 aa9.4□□□□□ -0.9
PTPN3-201ENST00000262539 KRT25Q7Z3Z0 450 aa9.4□□□□□ -0.9
PTPN3-201ENST00000262539 KCTD17Q8N5Z5 321 aa9.4□□□□□ -0.9
PTPN3-201ENST00000262539 SH2B2O14492 632 aaPredicted RBP9.4□□□□□ -0.9
PTPN3-201ENST00000262539 STK3Q13188 491 aa9.4□□□□□ -0.9
PTPN3-201ENST00000262539 USP48Q86UV5 1035 aa9.4□□□□□ -0.9
PTPN3-201ENST00000262539 GINM1Q9NU53 330 aa9.4□□□□□ -0.9
PTPN3-201ENST00000262539 SEPT7Q16181 437 aaKnown RBP9.4□□□□□ -0.9
PTPN3-201ENST00000262539 TMEM266Q2M3C6 531 aa9.4□□□□□ -0.9
PTPN3-201ENST00000262539 ZSCAN23Q3MJ62 389 aa9.4□□□□□ -0.9
PTPN3-201ENST00000262539 GPATCH4Q5T3I0 446 aaKnown RBP9.4□□□□□ -0.9
PTPN3-201ENST00000262539 DPP8Q6V1X1 898 aaPredicted RBP9.4□□□□□ -0.9
PTPN3-201ENST00000262539 TEX11Q8IYF3 940 aa9.4□□□□□ -0.9
PTPN3-201ENST00000262539 HELBQ8NG08 1087 aaPredicted RBP9.4□□□□□ -0.9
PTPN3-201ENST00000262539 LEO1Q8WVC0 666 aaPredicted RBP9.4□□□□□ -0.9
PTPN3-201ENST00000262539 MCM9Q9NXL9 1143 aa9.4□□□□□ -0.9
PTPN3-201ENST00000262539 FKBP1AP62942 108 aaKnown RBP9.4□□□□□ -0.9
PTPN3-201ENST00000262539 OGFOD1Q8N543 542 aa9.4□□□□□ -0.9
PTPN3-201ENST00000262539 ARHGEF1Q92888 912 aaKnown RBP9.4□□□□□ -0.9
PTPN3-201ENST00000262539 CMA1P23946 247 aa9.4□□□□□ -0.91
PTPN3-201ENST00000262539 ZNF589Q86UQ0 364 aaPredicted RBP9.4□□□□□ -0.91
PTPN3-201ENST00000262539 ZNF654Q8IZM8 581 aa9.4□□□□□ -0.91
PTPN3-201ENST00000262539 SH3GLB2Q9NR46 395 aa9.4□□□□□ -0.91
PTPN3-201ENST00000262539 ANO1Q5XXA6 986 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 KRT40Q6A162 431 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 DDX11Q96FC9 970 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 FAM205AQ6ZU69 1335 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 KCPQ6ZWJ8 1503 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 PPP6R2O75170 966 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 FOXP4Q8IVH2 680 aaPredicted RBP9.39□□□□□ -0.91
PTPN3-201ENST00000262539 FSIP1Q8NA03 581 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 SLC26A4O43511 780 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 SSR1P43307 286 aaKnown RBP9.39□□□□□ -0.91
PTPN3-201ENST00000262539 ZNF165P49910 485 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 TERF1P54274 439 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 HAND2P61296 217 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 APOBRQ0VD83 1088 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 NFIXQ14938 502 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 ADCK5Q3MIX3 580 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 ERFEQ4G0M1 354 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 TDRD7Q8NHU6 1098 aaKnown RBP9.39□□□□□ -0.91
PTPN3-201ENST00000262539 CUEDC2Q9H467 287 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 GOLGA6L9A6NEM1 432 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 MRPL12P52815 198 aaKnown RBP9.39□□□□□ -0.91
PTPN3-201ENST00000262539 TNFAIP1Q13829 316 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 DHX37Q8IY37 1157 aaKnown RBP9.39□□□□□ -0.91
PTPN3-201ENST00000262539 FGFR1OPO95684 399 aaKnown RBP9.39□□□□□ -0.91
PTPN3-201ENST00000262539 ADORA1P30542 326 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 SLC39A14Q15043 492 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 PPP1R18Q6NYC8 613 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 TEKT1Q969V4 418 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 PIH1D3Q9NQM4 214 aaKnown RBP9.39□□□□□ -0.91
PTPN3-201ENST00000262539 TCP11L1Q9NUJ3 509 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 UBN2Q6ZU65 1347 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 NHSL1Q5SYE7 1610 aa9.39□□□□□ -0.91
PTPN3-201ENST00000262539 PRPF3O43395 683 aaKnown RBP9.38□□□□□ -0.91
PTPN3-201ENST00000262539 TSPY3P0CV98 308 aa9.38□□□□□ -0.91
PTPN3-201ENST00000262539 TSPY8P0CW00 308 aa9.38□□□□□ -0.91
PTPN3-201ENST00000262539 TNKSO95271 1327 aa9.38□□□□□ -0.91
PTPN3-201ENST00000262539 DIS3L2Q8IYB7 885 aaKnown RBP9.38□□□□□ -0.91
PTPN3-201ENST00000262539 RTKN2Q8IZC4 609 aa9.38□□□□□ -0.91
PTPN3-201ENST00000262539 NECAB1Q8N987 351 aa9.38□□□□□ -0.91
PTPN3-201ENST00000262539 FAM84BQ96KN1 310 aaPredicted RBP9.38□□□□□ -0.91
PTPN3-201ENST00000262539 SLC4A9Q96Q91 983 aa9.38□□□□□ -0.91
PTPN3-201ENST00000262539 PPP1R9BQ96SB3 815 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms