RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 PCDHB6Q9Y5E3 794 aa18.82■□□□□ 0.6
TM9SF1-201ENST00000261789 POLR2DO15514 142 aaKnown RBP18.82■□□□□ 0.6
TM9SF1-201ENST00000261789 PRR29P0C7W0 189 aa18.82■□□□□ 0.6
TM9SF1-201ENST00000261789 IFNAR1P17181 557 aa18.82■□□□□ 0.6
TM9SF1-201ENST00000261789 WTAPQ15007 396 aa18.82■□□□□ 0.6
TM9SF1-201ENST00000261789 FAM237AA0A1B0GTK4 181 aa18.81■□□□□ 0.6
TM9SF1-201ENST00000261789 RTN1Q16799 776 aa18.81■□□□□ 0.6
TM9SF1-201ENST00000261789 OLFM4Q6UX06 510 aa18.81■□□□□ 0.6
TM9SF1-201ENST00000261789 USP49Q70CQ1 688 aa18.81■□□□□ 0.6
TM9SF1-201ENST00000261789 ADGRA1Q86SQ6 560 aa18.81■□□□□ 0.6
TM9SF1-201ENST00000261789 SDR42E1Q8WUS8 393 aa18.81■□□□□ 0.6
TM9SF1-201ENST00000261789 ANKRD36CQ5JPF3 1778 aa18.81■□□□□ 0.6
TM9SF1-201ENST00000261789 ERVV-1B6SEH8 477 aa18.81■□□□□ 0.6
TM9SF1-201ENST00000261789 SLU7O95391 586 aaKnown RBP18.81■□□□□ 0.6
TM9SF1-201ENST00000261789 IL6STP40189 918 aaPredicted RBP18.81■□□□□ 0.6
TM9SF1-201ENST00000261789 MDM2Q00987 491 aaPredicted RBP18.81■□□□□ 0.6
TM9SF1-201ENST00000261789 HOMER1Q86YM7 354 aa18.81■□□□□ 0.6
TM9SF1-201ENST00000261789 FEZ1Q99689 392 aa18.81■□□□□ 0.6
TM9SF1-201ENST00000261789 UTP14AQ9BVJ6 771 aaKnown RBP18.81■□□□□ 0.6
TM9SF1-201ENST00000261789 INTS13Q9NVM9 706 aa18.81■□□□□ 0.6
TM9SF1-201ENST00000261789 LRP2BPQ9P2M1 347 aa18.81■□□□□ 0.6
TM9SF1-201ENST00000261789 ROBO1Q9Y6N7 1651 aa18.81■□□□□ 0.6
TM9SF1-201ENST00000261789 hCG_1642624A0A1W2PR95 340 aa18.8■□□□□ 0.6
TM9SF1-201ENST00000261789 MINDY4BA8MYZ0 360 aa18.8■□□□□ 0.6
TM9SF1-201ENST00000261789 FBXO38Q6PIJ6 1188 aa18.8■□□□□ 0.6
TM9SF1-201ENST00000261789 KRT23Q9C075 422 aa18.8■□□□□ 0.6
TM9SF1-201ENST00000261789 CNNM2Q9H8M5 875 aa18.8■□□□□ 0.6
TM9SF1-201ENST00000261789 CHD4Q14839 1912 aa18.8■□□□□ 0.6
TM9SF1-201ENST00000261789 PSDA5PKW4 1024 aaPredicted RBP18.8■□□□□ 0.6
TM9SF1-201ENST00000261789 TRMT44Q8IYL2 757 aaKnown RBP18.8■□□□□ 0.6
TM9SF1-201ENST00000261789 ERO1AQ96HE7 468 aa18.8■□□□□ 0.6
TM9SF1-201ENST00000261789 OGFRQ9NZT2 677 aa18.8■□□□□ 0.6
TM9SF1-201ENST00000261789 SERTAD1Q9UHV2 236 aa18.8■□□□□ 0.6
TM9SF1-201ENST00000261789 FBXO2Q9UK22 296 aaPredicted RBP18.8■□□□□ 0.6
TM9SF1-201ENST00000261789 FMR1Q06787 632 aaKnown RBP eCLIP18.79■□□□□ 0.6
TM9SF1-201ENST00000261789 SAFBQ15424 915 aaKnown RBP eCLIP18.79■□□□□ 0.6
TM9SF1-201ENST00000261789 ERCC6LQ2NKX8 1250 aa18.79■□□□□ 0.6
TM9SF1-201ENST00000261789 TRIM22Q8IYM9 498 aa18.79■□□□□ 0.6
TM9SF1-201ENST00000261789 ABCF2Q9UG63 623 aa18.79■□□□□ 0.6
TM9SF1-201ENST00000261789 DDX41Q9UJV9 622 aaKnown RBP18.79■□□□□ 0.6
TM9SF1-201ENST00000261789 MAN1B1Q9UKM7 699 aa18.79■□□□□ 0.6
TM9SF1-201ENST00000261789 STK36Q9NRP7 1315 aa18.79■□□□□ 0.6
TM9SF1-201ENST00000261789 FAM205CA6NFA0 338 aa18.79■□□□□ 0.6
TM9SF1-201ENST00000261789 EXOC5O00471 708 aa18.79■□□□□ 0.6
TM9SF1-201ENST00000261789 CRACR2BQ8N4Y2 399 aaPredicted RBP18.79■□□□□ 0.6
TM9SF1-201ENST00000261789 STAG1Q8WVM7 1258 aa18.79■□□□□ 0.6
TM9SF1-201ENST00000261789 CABP5Q9NP86 173 aa18.79■□□□□ 0.6
TM9SF1-201ENST00000261789 DNAI1Q9UI46 699 aa18.79■□□□□ 0.6
TM9SF1-201ENST00000261789 FANCGO15287 622 aa18.78■□□□□ 0.6
TM9SF1-201ENST00000261789 TOP1P11387 765 aaKnown RBP18.78■□□□□ 0.6
TM9SF1-201ENST00000261789 POSTNQ15063 836 aa18.78■□□□□ 0.6
TM9SF1-201ENST00000261789 VSTM4Q8IW00 320 aa18.78■□□□□ 0.6
TM9SF1-201ENST00000261789 RGS22Q8NE09 1264 aa18.78■□□□□ 0.6
TM9SF1-201ENST00000261789 SHISA4Q96DD7 197 aa18.78■□□□□ 0.6
TM9SF1-201ENST00000261789 NACAP1Q9BZK3 213 aa18.78■□□□□ 0.6
TM9SF1-201ENST00000261789 FAM177A1Q8N128 213 aaPredicted RBP18.78■□□□□ 0.6
TM9SF1-201ENST00000261789 AHDC1Q5TGY3 1603 aaPredicted RBP18.77■□□□□ 0.6
TM9SF1-201ENST00000261789 ERICH2A1L162 156 aa18.77■□□□□ 0.6
TM9SF1-201ENST00000261789 KIF2AO00139 706 aaPredicted RBP18.77■□□□□ 0.6
TM9SF1-201ENST00000261789 PTPREP23469 700 aa18.77■□□□□ 0.6
TM9SF1-201ENST00000261789 SART3Q15020 963 aaKnown RBP18.77■□□□□ 0.6
TM9SF1-201ENST00000261789 INTS5Q6P9B9 1019 aaKnown RBP18.77■□□□□ 0.6
TM9SF1-201ENST00000261789 ZNF654Q8IZM8 581 aa18.77■□□□□ 0.6
TM9SF1-201ENST00000261789 FANCBQ8NB91 859 aa18.77■□□□□ 0.6
TM9SF1-201ENST00000261789 ACSBG1Q96GR2 724 aa18.77■□□□□ 0.6
TM9SF1-201ENST00000261789 CYP2D7A0A087X1C5 515 aa18.77■□□□□ 0.59
TM9SF1-201ENST00000261789 NRDCO43847 1150 aa18.77■□□□□ 0.59
TM9SF1-201ENST00000261789 CYP7A1P22680 504 aa18.77■□□□□ 0.59
TM9SF1-201ENST00000261789 EIF5P55010 431 aaKnown RBP18.77■□□□□ 0.59
TM9SF1-201ENST00000261789 ZNF397Q8NF99 534 aaPredicted RBP18.77■□□□□ 0.59
TM9SF1-201ENST00000261789 WASF1Q92558 559 aa18.77■□□□□ 0.59
TM9SF1-201ENST00000261789 L2HGDHQ9H9P8 463 aa18.77■□□□□ 0.59
TM9SF1-201ENST00000261789 CBFA2T2O43439 604 aa18.76■□□□□ 0.59
TM9SF1-201ENST00000261789 PRDM1O75626 825 aa18.76■□□□□ 0.59
TM9SF1-201ENST00000261789 CHRNDQ07001 517 aa18.76■□□□□ 0.59
TM9SF1-201ENST00000261789 PPARAQ07869 468 aa18.76■□□□□ 0.59
TM9SF1-201ENST00000261789 TMX1Q9H3N1 280 aa18.76■□□□□ 0.59
TM9SF1-201ENST00000261789 NFE2L3Q9Y4A8 694 aa18.76■□□□□ 0.59
TM9SF1-201ENST00000261789 DEXIO95424 95 aa18.76■□□□□ 0.59
TM9SF1-201ENST00000261789 CCDC93Q567U6 631 aa18.76■□□□□ 0.59
TM9SF1-201ENST00000261789 EARS2Q5JPH6 523 aaKnown RBP18.76■□□□□ 0.59
TM9SF1-201ENST00000261789 MED15Q96RN5 788 aa18.76■□□□□ 0.59
TM9SF1-201ENST00000261789 UBAC1Q9BSL1 405 aa18.76■□□□□ 0.59
TM9SF1-201ENST00000261789 CSRNP2Q9H175 543 aa18.76■□□□□ 0.59
TM9SF1-201ENST00000261789 FOXP1Q9H334 677 aaPredicted RBP18.76■□□□□ 0.59
TM9SF1-201ENST00000261789 VPS54Q9P1Q0 977 aa18.76■□□□□ 0.59
TM9SF1-201ENST00000261789 CASP1P29466 404 aa18.75■□□□□ 0.59
TM9SF1-201ENST00000261789 IGHMBP2P38935 993 aaKnown RBP18.75■□□□□ 0.59
TM9SF1-201ENST00000261789 CRKLP46109 303 aaKnown RBP18.75■□□□□ 0.59
TM9SF1-201ENST00000261789 GYG1P46976 350 aa18.75■□□□□ 0.59
TM9SF1-201ENST00000261789 ADKP55263 362 aaKnown RBP18.75■□□□□ 0.59
TM9SF1-201ENST00000261789 ETF1P62495 437 aaKnown RBP18.75■□□□□ 0.59
TM9SF1-201ENST00000261789 RILPL1Q5EBL4 403 aa18.75■□□□□ 0.59
TM9SF1-201ENST00000261789 TRIM65Q6PJ69 517 aa18.75■□□□□ 0.59
TM9SF1-201ENST00000261789 DOCK2Q92608 1830 aa18.75■□□□□ 0.59
TM9SF1-201ENST00000261789 CDK11BP21127 795 aaKnown RBP18.75■□□□□ 0.59
TM9SF1-201ENST00000261789 ATP6V1AP38606 617 aa18.75■□□□□ 0.59
TM9SF1-201ENST00000261789 SAMSN1Q9NSI8 373 aaKnown RBP18.75■□□□□ 0.59
TM9SF1-201ENST00000261789 NIP7Q9Y221 180 aaKnown RBP eCLIP18.75■□□□□ 0.59
TM9SF1-201ENST00000261789 COL4A1P02462 1669 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms