RNA–Protein interactions for RNA: ENST00000261692.6

CDK2AP1-201, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK2AP1, Length 1,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-201ENST00000261692 RNF41Q9H4P4 317 aaPredicted RBP28.47■■■□□ 2.15
CDK2AP1-201ENST00000261692 HERC5Q9UII4 1024 aaKnown RBP28.47■■■□□ 2.15
CDK2AP1-201ENST00000261692 MYH1P12882 1939 aa28.47■■■□□ 2.15
CDK2AP1-201ENST00000261692 ADM5C9JUS6 153 aa28.47■■■□□ 2.15
CDK2AP1-201ENST00000261692 KIF3CO14782 793 aa28.47■■■□□ 2.15
CDK2AP1-201ENST00000261692 CHADLQ6NUI6 762 aa28.47■■■□□ 2.15
CDK2AP1-201ENST00000261692 USP48Q86UV5 1035 aa28.47■■■□□ 2.15
CDK2AP1-201ENST00000261692 CRACR2BQ8N4Y2 399 aaPredicted RBP28.47■■■□□ 2.15
CDK2AP1-201ENST00000261692 PDE4BQ07343 736 aa28.46■■■□□ 2.15
CDK2AP1-201ENST00000261692 METTL16Q86W50 562 aaKnown RBP28.46■■■□□ 2.15
CDK2AP1-201ENST00000261692 ZNF784Q8NCA9 323 aaPredicted RBP28.46■■■□□ 2.15
CDK2AP1-201ENST00000261692 SWAP70Q9UH65 585 aa28.46■■■□□ 2.15
CDK2AP1-201ENST00000261692 TBC1D12O60347 775 aa28.45■■■□□ 2.14
CDK2AP1-201ENST00000261692 GABPAQ06546 454 aa28.45■■■□□ 2.14
CDK2AP1-201ENST00000261692 C16orf86Q6ZW13 317 aa28.45■■■□□ 2.14
CDK2AP1-201ENST00000261692 STAG1Q8WVM7 1258 aa28.45■■■□□ 2.14
CDK2AP1-201ENST00000261692 KCNB2Q92953 911 aa28.45■■■□□ 2.14
CDK2AP1-201ENST00000261692 GLIS2Q9BZE0 524 aaPredicted RBP28.45■■■□□ 2.14
CDK2AP1-201ENST00000261692 C22orf23Q9BZE7 217 aa28.45■■■□□ 2.14
CDK2AP1-201ENST00000261692 NF2P35240 595 aa28.44■■■□□ 2.14
CDK2AP1-201ENST00000261692 KRT32Q14532 448 aa28.44■■■□□ 2.14
CDK2AP1-201ENST00000261692 TSGA10IPQ3SY00 556 aa28.44■■■□□ 2.14
CDK2AP1-201ENST00000261692 AKNAD1Q5T1N1 836 aa28.44■■■□□ 2.14
CDK2AP1-201ENST00000261692 DCAF15Q66K64 600 aa28.44■■■□□ 2.14
CDK2AP1-201ENST00000261692 NT5C2P49902 561 aa28.43■■■□□ 2.14
CDK2AP1-201ENST00000261692 ANAPC15P60006 121 aa28.43■■■□□ 2.14
CDK2AP1-201ENST00000261692 CTDSPL2Q05D32 466 aa28.43■■■□□ 2.14
CDK2AP1-201ENST00000261692 NBPF12Q5TAG4 269 aaPredicted RBP28.43■■■□□ 2.14
CDK2AP1-201ENST00000261692 MFSD6Q6ZSS7 791 aa28.43■■■□□ 2.14
CDK2AP1-201ENST00000261692 CDAN1Q8IWY9 1227 aa28.43■■■□□ 2.14
CDK2AP1-201ENST00000261692 LAMB1P07942 1786 aa28.43■■■□□ 2.14
CDK2AP1-201ENST00000261692 MAP3K10Q02779 954 aa28.42■■■□□ 2.14
CDK2AP1-201ENST00000261692 TRDNQ13061 729 aa28.42■■■□□ 2.14
CDK2AP1-201ENST00000261692 PRAMEF18Q5VWM3 479 aa28.42■■■□□ 2.14
CDK2AP1-201ENST00000261692 TBC1D10CQ8IV04 446 aa28.42■■■□□ 2.14
CDK2AP1-201ENST00000261692 CDCA5Q96FF9 252 aa28.42■■■□□ 2.14
CDK2AP1-201ENST00000261692 DYNLL2Q96FJ2 89 aa28.42■■■□□ 2.14
CDK2AP1-201ENST00000261692 NBPF3Q9H094 633 aa28.42■■■□□ 2.14
CDK2AP1-201ENST00000261692 CNNM2Q9H8M5 875 aa28.42■■■□□ 2.14
CDK2AP1-201ENST00000261692 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.42■■■□□ 2.14
CDK2AP1-201ENST00000261692 MKNK2Q9HBH9 465 aa28.42■■■□□ 2.14
CDK2AP1-201ENST00000261692 FGRP09769 529 aa28.41■■■□□ 2.14
CDK2AP1-201ENST00000261692 POLR2AP24928 1970 aaKnown RBP28.41■■■□□ 2.14
CDK2AP1-201ENST00000261692 RBM25P49756 843 aaKnown RBP28.41■■■□□ 2.14
CDK2AP1-201ENST00000261692 EVX2Q03828 476 aa28.41■■■□□ 2.14
CDK2AP1-201ENST00000261692 LAMA4Q16363 1823 aa28.41■■■□□ 2.14
CDK2AP1-201ENST00000261692 CDK8P49336 464 aa28.4■■■□□ 2.14
CDK2AP1-201ENST00000261692 E7EWF7 191 aa28.4■■■□□ 2.14
CDK2AP1-201ENST00000261692 SMIM22K7EJ46 135 aa28.4■■■□□ 2.14
CDK2AP1-201ENST00000261692 RASEFQ8IZ41 740 aa28.4■■■□□ 2.14
CDK2AP1-201ENST00000261692 STK11IPQ8N1F8 1099 aa28.4■■■□□ 2.14
CDK2AP1-201ENST00000261692 SMC1BQ8NDV3 1235 aa28.4■■■□□ 2.14
CDK2AP1-201ENST00000261692 KRT23Q9C075 422 aa28.4■■■□□ 2.14
CDK2AP1-201ENST00000261692 SNX14Q9Y5W7 946 aa28.4■■■□□ 2.14
CDK2AP1-201ENST00000261692 ORC4O43929 436 aa28.39■■■□□ 2.13
CDK2AP1-201ENST00000261692 TOMM70O94826 608 aa28.39■■■□□ 2.13
CDK2AP1-201ENST00000261692 MIGA2Q7L4E1 593 aa28.39■■■□□ 2.13
CDK2AP1-201ENST00000261692 TBC1D32Q96NH3 1257 aa28.39■■■□□ 2.13
CDK2AP1-201ENST00000261692 DNAJC18Q9H819 358 aa28.39■■■□□ 2.13
CDK2AP1-201ENST00000261692 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.39■■■□□ 2.13
CDK2AP1-201ENST00000261692 PPP1R12BO60237 982 aaPredicted RBP28.38■■■□□ 2.13
CDK2AP1-201ENST00000261692 RALYLQ86SE5 291 aaKnown RBP28.38■■■□□ 2.13
CDK2AP1-201ENST00000261692 SLC44A5Q8NCS7 719 aa28.38■■■□□ 2.13
CDK2AP1-201ENST00000261692 RBM46Q8TBY0 533 aaKnown RBP28.38■■■□□ 2.13
CDK2AP1-201ENST00000261692 TOMM22Q9NS69 142 aa28.38■■■□□ 2.13
CDK2AP1-201ENST00000261692 TATDN1Q6P1N9 297 aa28.37■■■□□ 2.13
CDK2AP1-201ENST00000261692 ZNF444Q8N0Y2 327 aaPredicted RBP28.37■■■□□ 2.13
CDK2AP1-201ENST00000261692 NCOA7Q8NI08 942 aa28.37■■■□□ 2.13
CDK2AP1-201ENST00000261692 ZNF341Q9BYN7 854 aa28.37■■■□□ 2.13
CDK2AP1-201ENST00000261692 TAF6LQ9Y6J9 622 aa28.37■■■□□ 2.13
CDK2AP1-201ENST00000261692 PSMA5P28066 241 aa28.36■■■□□ 2.13
CDK2AP1-201ENST00000261692 SHMT1P34896 483 aa28.36■■■□□ 2.13
CDK2AP1-201ENST00000261692 ESR2Q92731 530 aa28.36■■■□□ 2.13
CDK2AP1-201ENST00000261692 SIPA1L1O43166 1804 aa28.36■■■□□ 2.13
CDK2AP1-201ENST00000261692 FAM196BA6NMK8 535 aa28.36■■■□□ 2.13
CDK2AP1-201ENST00000261692 DLK2Q6UY11 383 aa28.36■■■□□ 2.13
CDK2AP1-201ENST00000261692 IL17RAQ96F46 866 aa28.36■■■□□ 2.13
CDK2AP1-201ENST00000261692 CCDC17Q96LX7 622 aa28.36■■■□□ 2.13
CDK2AP1-201ENST00000261692 SSC5DA1L4H1 1573 aa28.35■■■□□ 2.13
CDK2AP1-201ENST00000261692 NEDD4P46934 1319 aa28.35■■■□□ 2.13
CDK2AP1-201ENST00000261692 TRAF5O00463 557 aa28.35■■■□□ 2.13
CDK2AP1-201ENST00000261692 PRDM1O75626 825 aa28.35■■■□□ 2.13
CDK2AP1-201ENST00000261692 ITGBL1O95965 494 aaPredicted RBP28.35■■■□□ 2.13
CDK2AP1-201ENST00000261692 HMGB1P09429 215 aaKnown RBP28.35■■■□□ 2.13
CDK2AP1-201ENST00000261692 CERKLQ49MI3 558 aaPredicted RBP28.35■■■□□ 2.13
CDK2AP1-201ENST00000261692 RRP12Q5JTH9 1297 aaKnown RBP28.35■■■□□ 2.13
CDK2AP1-201ENST00000261692 STOX1Q6ZVD7 989 aa28.35■■■□□ 2.13
CDK2AP1-201ENST00000261692 NEK1Q96PY6 1258 aa28.35■■■□□ 2.13
CDK2AP1-201ENST00000261692 RASA1P20936 1047 aa28.33■■■□□ 2.13
CDK2AP1-201ENST00000261692 TM6SF1Q9BZW5 370 aa28.33■■■□□ 2.13
CDK2AP1-201ENST00000261692 INCENPQ9NQS7 918 aa28.33■■■□□ 2.13
CDK2AP1-201ENST00000261692 TACC3Q9Y6A5 838 aa28.33■■■□□ 2.13
CDK2AP1-201ENST00000261692 RANBP6O60518 1105 aaKnown RBP28.32■■■□□ 2.12
CDK2AP1-201ENST00000261692 SLURP2P0DP57 97 aa28.32■■■□□ 2.12
CDK2AP1-201ENST00000261692 ADCK5Q3MIX3 580 aa28.32■■■□□ 2.12
CDK2AP1-201ENST00000261692 JAKMIP1Q96N16 626 aaKnown RBP28.32■■■□□ 2.12
CDK2AP1-201ENST00000261692 TSPY2A6NKD2 308 aa28.32■■■□□ 2.12
CDK2AP1-201ENST00000261692 B4E1Z4 1266 aa28.32■■■□□ 2.12
CDK2AP1-201ENST00000261692 IREB2P48200 963 aaKnown RBP28.32■■■□□ 2.12
CDK2AP1-201ENST00000261692 KLRG1Q96E93 195 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms