RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 KCNH3Q9ULD8 1083 aa16.63■□□□□ 0.25
SFSWAP-201ENST00000261674 KLHL10Q6JEL2 608 aa16.63■□□□□ 0.25
SFSWAP-201ENST00000261674 ZSWIM4Q9H7M6 989 aa16.63■□□□□ 0.25
SFSWAP-201ENST00000261674 SLC12A7Q9Y666 1083 aa16.63■□□□□ 0.25
SFSWAP-201ENST00000261674 ADKP55263 362 aaKnown RBP16.62■□□□□ 0.25
SFSWAP-201ENST00000261674 TRAPPC3LQ5T215 181 aa16.62■□□□□ 0.25
SFSWAP-201ENST00000261674 C3orf67Q6ZVT6 689 aa16.62■□□□□ 0.25
SFSWAP-201ENST00000261674 CPLX3Q8WVH0 158 aa16.62■□□□□ 0.25
SFSWAP-201ENST00000261674 CARD6Q9BX69 1037 aa16.62■□□□□ 0.25
SFSWAP-201ENST00000261674 PDGFDQ9GZP0 370 aaPredicted RBP16.62■□□□□ 0.25
SFSWAP-201ENST00000261674 NAPBQ9H115 298 aa16.62■□□□□ 0.25
SFSWAP-201ENST00000261674 IQSEC3Q9UPP2 1182 aaPredicted RBP16.62■□□□□ 0.25
SFSWAP-201ENST00000261674 POLR3GO15318 223 aaPredicted RBP16.62■□□□□ 0.25
SFSWAP-201ENST00000261674 CDKL5O76039 1030 aa16.62■□□□□ 0.25
SFSWAP-201ENST00000261674 KIF20AO95235 890 aa16.62■□□□□ 0.25
SFSWAP-201ENST00000261674 EZH2Q15910 746 aaKnown RBP16.62■□□□□ 0.25
SFSWAP-201ENST00000261674 ERFEQ4G0M1 354 aa16.62■□□□□ 0.25
SFSWAP-201ENST00000261674 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.62■□□□□ 0.253e-7■■■□□ 18.7
SFSWAP-201ENST00000261674 ETF1P62495 437 aaKnown RBP16.62■□□□□ 0.25
SFSWAP-201ENST00000261674 FOXP4Q8IVH2 680 aaPredicted RBP16.62■□□□□ 0.25
SFSWAP-201ENST00000261674 ISCA1Q9BUE6 129 aa16.62■□□□□ 0.25
SFSWAP-201ENST00000261674 MORC2Q9Y6X9 1032 aaPredicted RBP16.62■□□□□ 0.25
SFSWAP-201ENST00000261674 POLR2DO15514 142 aaKnown RBP16.61■□□□□ 0.25
SFSWAP-201ENST00000261674 EVCP57679 992 aa16.61■□□□□ 0.25
SFSWAP-201ENST00000261674 GRIN1Q05586 938 aa16.61■□□□□ 0.25
SFSWAP-201ENST00000261674 NBPF3Q9H094 633 aa16.61■□□□□ 0.25
SFSWAP-201ENST00000261674 NEDD4P46934 1319 aa16.61■□□□□ 0.25
SFSWAP-201ENST00000261674 hCG_1642624A0A1W2PR95 340 aa16.61■□□□□ 0.25
SFSWAP-201ENST00000261674 GUCY1A2P33402 732 aa16.61■□□□□ 0.25
SFSWAP-201ENST00000261674 GNG11P61952 73 aa16.61■□□□□ 0.25
SFSWAP-201ENST00000261674 SAFBQ15424 915 aaKnown RBP eCLIP16.61■□□□□ 0.254e-7■■■■□ 21.8
SFSWAP-201ENST00000261674 ANKRD18BA2A2Z9 1011 aa16.6■□□□□ 0.25
SFSWAP-201ENST00000261674 ADD2P35612 726 aa16.6■□□□□ 0.25
SFSWAP-201ENST00000261674 PDE4BQ07343 736 aa16.6■□□□□ 0.25
SFSWAP-201ENST00000261674 SSRP1Q08945 709 aaKnown RBP16.6■□□□□ 0.25
SFSWAP-201ENST00000261674 ARMT1Q9H993 441 aa16.6■□□□□ 0.25
SFSWAP-201ENST00000261674 AFDNP55196 1824 aaKnown RBP16.6■□□□□ 0.25
SFSWAP-201ENST00000261674 ZMYM6O95789 1325 aa16.6■□□□□ 0.25
SFSWAP-201ENST00000261674 CBFA2T2O43439 604 aa16.6■□□□□ 0.25
SFSWAP-201ENST00000261674 METTL16Q86W50 562 aaKnown RBP16.6■□□□□ 0.25
SFSWAP-201ENST00000261674 NBPF5PQ86XG9 351 aaPredicted RBP16.6■□□□□ 0.25
SFSWAP-201ENST00000261674 MAGEB6Q8N7X4 407 aa16.6■□□□□ 0.25
SFSWAP-201ENST00000261674 DESI2Q9BSY9 194 aa16.6■□□□□ 0.25
SFSWAP-201ENST00000261674 ZSWIM5Q9P217 1185 aa16.6■□□□□ 0.25
SFSWAP-201ENST00000261674 PDE6AP16499 860 aa16.6■□□□□ 0.25
SFSWAP-201ENST00000261674 CLCN6P51797 869 aa16.6■□□□□ 0.25
SFSWAP-201ENST00000261674 KARSQ15046 597 aaKnown RBP16.6■□□□□ 0.25
SFSWAP-201ENST00000261674 MIGA1Q8NAN2 632 aa16.6■□□□□ 0.25
SFSWAP-201ENST00000261674 SH2B2O14492 632 aaPredicted RBP16.59■□□□□ 0.25
SFSWAP-201ENST00000261674 PRKAB2O43741 272 aa16.59■□□□□ 0.25
SFSWAP-201ENST00000261674 MBD4O95243 580 aa16.59■□□□□ 0.25
SFSWAP-201ENST00000261674 TDO2P48775 406 aa16.59■□□□□ 0.25
SFSWAP-201ENST00000261674 STX17P56962 302 aa16.59■□□□□ 0.25
SFSWAP-201ENST00000261674 NR5A1Q13285 461 aa16.59■□□□□ 0.25
SFSWAP-201ENST00000261674 ZBTB38Q8NAP3 1195 aaPredicted RBP16.59■□□□□ 0.25
SFSWAP-201ENST00000261674 ZNF446Q9NWS9 450 aa16.59■□□□□ 0.25
SFSWAP-201ENST00000261674 PSDA5PKW4 1024 aaPredicted RBP16.59■□□□□ 0.25
SFSWAP-201ENST00000261674 RANBP6O60518 1105 aaKnown RBP16.59■□□□□ 0.25
SFSWAP-201ENST00000261674 TEX35Q5T0J7 233 aa16.59■□□□□ 0.25
SFSWAP-201ENST00000261674 DIS3L2Q8IYB7 885 aaKnown RBP16.59■□□□□ 0.25
SFSWAP-201ENST00000261674 SETDB2Q96T68 719 aa16.59■□□□□ 0.25
SFSWAP-201ENST00000261674 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.59■□□□□ 0.25
SFSWAP-201ENST00000261674 NFE2L3Q9Y4A8 694 aa16.59■□□□□ 0.25
SFSWAP-201ENST00000261674 SEC31AO94979 1220 aaKnown RBP16.58■□□□□ 0.25
SFSWAP-201ENST00000261674 SLFN14P0C7P3 912 aa16.58■□□□□ 0.25
SFSWAP-201ENST00000261674 AFMP43652 599 aa16.58■□□□□ 0.25
SFSWAP-201ENST00000261674 KRBA2Q6ZNG9 492 aa16.58■□□□□ 0.25
SFSWAP-201ENST00000261674 HSD3B7Q9H2F3 369 aa16.58■□□□□ 0.25
SFSWAP-201ENST00000261674 SERTAD1Q9UHV2 236 aa16.58■□□□□ 0.25
SFSWAP-201ENST00000261674 ADAMTS7Q9UKP4 1686 aa16.58■□□□□ 0.25
SFSWAP-201ENST00000261674 NWD2Q9ULI1 1742 aa16.58■□□□□ 0.25
SFSWAP-201ENST00000261674 MINDY4BA8MYZ0 360 aa16.58■□□□□ 0.24
SFSWAP-201ENST00000261674 TTLL11Q8NHH1 800 aa16.58■□□□□ 0.24
SFSWAP-201ENST00000261674 TRERF1Q96PN7 1200 aa16.58■□□□□ 0.24
SFSWAP-201ENST00000261674 BPIFA3Q9BQP9 254 aa16.58■□□□□ 0.24
SFSWAP-201ENST00000261674 ZNF219Q9P2Y4 722 aaPredicted RBP16.58■□□□□ 0.24
SFSWAP-201ENST00000261674 IKBKBO14920 756 aa16.58■□□□□ 0.24
SFSWAP-201ENST00000261674 COBLO75128 1261 aa16.58■□□□□ 0.24
SFSWAP-201ENST00000261674 TERF2Q15554 542 aa16.58■□□□□ 0.24
SFSWAP-201ENST00000261674 KRI1Q8N9T8 703 aaKnown RBP16.58■□□□□ 0.24
SFSWAP-201ENST00000261674 RPS6KA4O75676 772 aa16.57■□□□□ 0.24
SFSWAP-201ENST00000261674 PCCAP05165 728 aaPredicted RBP16.57■□□□□ 0.24
SFSWAP-201ENST00000261674 CASP1P29466 404 aa16.57■□□□□ 0.24
SFSWAP-201ENST00000261674 BMS1Q14692 1282 aaKnown RBP16.57■□□□□ 0.24
SFSWAP-201ENST00000261674 PTPAQ15257 358 aa16.57■□□□□ 0.24
SFSWAP-201ENST00000261674 TMCO3Q6UWJ1 677 aa16.57■□□□□ 0.24
SFSWAP-201ENST00000261674 RIPOR2Q9Y4F9 1068 aa16.57■□□□□ 0.24
SFSWAP-201ENST00000261674 LAMA4Q16363 1823 aa16.57■□□□□ 0.24
SFSWAP-201ENST00000261674 USP49Q70CQ1 688 aa16.57■□□□□ 0.24
SFSWAP-201ENST00000261674 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.57■□□□□ 0.24
SFSWAP-201ENST00000261674 A0A0U1RQG5 324 aaPredicted RBP16.57■□□□□ 0.24
SFSWAP-201ENST00000261674 PRR29P0C7W0 189 aa16.57■□□□□ 0.24
SFSWAP-201ENST00000261674 GABPB1Q06547 395 aaPredicted RBP16.57■□□□□ 0.24
SFSWAP-201ENST00000261674 TRIM22Q8IYM9 498 aa16.57■□□□□ 0.24
SFSWAP-201ENST00000261674 STAMQ92783 540 aa16.57■□□□□ 0.24
SFSWAP-201ENST00000261674 BAG1Q99933 345 aaPredicted RBP16.57■□□□□ 0.24
SFSWAP-201ENST00000261674 CABP5Q9NP86 173 aa16.57■□□□□ 0.24
SFSWAP-201ENST00000261674 MYH14Q7Z406 1995 aaKnown RBP16.56■□□□□ 0.24
SFSWAP-201ENST00000261674 BMP6P22004 513 aa16.56■□□□□ 0.24
SFSWAP-201ENST00000261674 MFSD6Q6ZSS7 791 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms