RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 JDP2Q8WYK2 163 aa22.05■■□□□ 1.12
COL4A3BP-201ENST00000261415 CRNKL1Q9BZJ0 848 aaKnown RBP22.05■■□□□ 1.12
COL4A3BP-201ENST00000261415 TM6SF1Q9BZW5 370 aa22.05■■□□□ 1.12
COL4A3BP-201ENST00000261415 DDX41Q9UJV9 622 aaKnown RBP22.05■■□□□ 1.12
COL4A3BP-201ENST00000261415 DAGLAQ9Y4D2 1042 aa22.05■■□□□ 1.12
COL4A3BP-201ENST00000261415 RIOK3O14730 519 aaKnown RBP22.05■■□□□ 1.12
COL4A3BP-201ENST00000261415 CASTP20810 708 aaKnown RBP22.05■■□□□ 1.12
COL4A3BP-201ENST00000261415 SCNN1DP51172 638 aa22.05■■□□□ 1.12
COL4A3BP-201ENST00000261415 NEK4P51957 841 aa22.05■■□□□ 1.12
COL4A3BP-201ENST00000261415 HAND2P61296 217 aa22.05■■□□□ 1.12
COL4A3BP-201ENST00000261415 KRT32Q14532 448 aa22.05■■□□□ 1.12
COL4A3BP-201ENST00000261415 MORC2Q9Y6X9 1032 aaPredicted RBP22.05■■□□□ 1.12
COL4A3BP-201ENST00000261415 TDO2P48775 406 aa22.04■■□□□ 1.12
COL4A3BP-201ENST00000261415 PRELPP51888 382 aa22.04■■□□□ 1.12
COL4A3BP-201ENST00000261415 SH3RF3Q8TEJ3 882 aaPredicted RBP22.04■■□□□ 1.12
COL4A3BP-201ENST00000261415 PSMD14O00487 310 aa22.04■■□□□ 1.12
COL4A3BP-201ENST00000261415 ZNF213O14771 459 aa22.04■■□□□ 1.12
COL4A3BP-201ENST00000261415 CERS3Q8IU89 383 aa22.04■■□□□ 1.12
COL4A3BP-201ENST00000261415 MYO3BQ8WXR4 1341 aa22.04■■□□□ 1.12
COL4A3BP-201ENST00000261415 ST18O60284 1047 aa22.03■■□□□ 1.12
COL4A3BP-201ENST00000261415 VIL1P09327 827 aaKnown RBP22.03■■□□□ 1.12
COL4A3BP-201ENST00000261415 RSBN1LQ6PCB5 846 aaPredicted RBP22.03■■□□□ 1.12
COL4A3BP-201ENST00000261415 STOX1Q6ZVD7 989 aa22.03■■□□□ 1.12
COL4A3BP-201ENST00000261415 TPM3P06753 285 aa22.03■■□□□ 1.12
COL4A3BP-201ENST00000261415 HHIPL2Q6UWX4 724 aa22.03■■□□□ 1.12
COL4A3BP-201ENST00000261415 TEKT1Q969V4 418 aa22.03■■□□□ 1.12
COL4A3BP-201ENST00000261415 ZSWIM6Q9HCJ5 1215 aa22.03■■□□□ 1.12
COL4A3BP-201ENST00000261415 SOCS7O14512 581 aa22.02■■□□□ 1.12
COL4A3BP-201ENST00000261415 PSMA5P28066 241 aa22.02■■□□□ 1.12
COL4A3BP-201ENST00000261415 GIMAP6Q6P9H5 292 aa22.02■■□□□ 1.12
COL4A3BP-201ENST00000261415 ARHGAP27Q6ZUM4 889 aa22.02■■□□□ 1.12
COL4A3BP-201ENST00000261415 ATP8A2Q9NTI2 1148 aa22.02■■□□□ 1.12
COL4A3BP-201ENST00000261415 E7EWF7 191 aa22.01■■□□□ 1.11
COL4A3BP-201ENST00000261415 CPA1P15085 419 aa22.01■■□□□ 1.11
COL4A3BP-201ENST00000261415 PLCG2P16885 1265 aa22.01■■□□□ 1.11
COL4A3BP-201ENST00000261415 CRKP46108 304 aa22.01■■□□□ 1.11
COL4A3BP-201ENST00000261415 CXCL9Q07325 125 aa22.01■■□□□ 1.11
COL4A3BP-201ENST00000261415 NBPF3Q9H094 633 aa22.01■■□□□ 1.11
COL4A3BP-201ENST00000261415 RHBDL3P58872 404 aa22.01■■□□□ 1.11
COL4A3BP-201ENST00000261415 HDLBPQ00341 1268 aaKnown RBP22.01■■□□□ 1.11
COL4A3BP-201ENST00000261415 COL9A3Q14050 684 aaPredicted RBP22.01■■□□□ 1.11
COL4A3BP-201ENST00000261415 RUFY3Q7L099 469 aa22.01■■□□□ 1.11
COL4A3BP-201ENST00000261415 NEK1Q96PY6 1258 aa22.01■■□□□ 1.11
COL4A3BP-201ENST00000261415 MRIQ9BWK5 157 aa22.01■■□□□ 1.11
COL4A3BP-201ENST00000261415 DCP1AQ9NPI6 582 aaPredicted RBP22.01■■□□□ 1.11
COL4A3BP-201ENST00000261415 CYP46A1Q9Y6A2 500 aa22.01■■□□□ 1.11
COL4A3BP-201ENST00000261415 MYH8P13535 1937 aa22■■□□□ 1.11
COL4A3BP-201ENST00000261415 BLOC1S2Q6QNY1 142 aa22■■□□□ 1.11
COL4A3BP-201ENST00000261415 GMLQ99445 158 aa22■■□□□ 1.11
COL4A3BP-201ENST00000261415 YY1AP1Q9H869 796 aa22■■□□□ 1.11
COL4A3BP-201ENST00000261415 YBX3P16989 372 aaKnown RBP eCLIP21.99■■□□□ 1.11
COL4A3BP-201ENST00000261415 USP5P45974 858 aa21.99■■□□□ 1.11
COL4A3BP-201ENST00000261415 CIAPIN1Q6FI81 312 aa21.99■■□□□ 1.11
COL4A3BP-201ENST00000261415 TBC1D10CQ8IV04 446 aa21.99■■□□□ 1.11
COL4A3BP-201ENST00000261415 ZDHHC15Q96MV8 337 aa21.99■■□□□ 1.11
COL4A3BP-201ENST00000261415 TTC14Q96N46 770 aa21.99■■□□□ 1.11
COL4A3BP-201ENST00000261415 SERPINA10Q9UK55 444 aa21.99■■□□□ 1.11
COL4A3BP-201ENST00000261415 TEX11Q8IYF3 940 aa21.99■■□□□ 1.11
COL4A3BP-201ENST00000261415 MKRN1Q9UHC7 482 aaKnown RBP21.99■■□□□ 1.11
COL4A3BP-201ENST00000261415 ZBTB12Q9Y330 459 aaPredicted RBP21.99■■□□□ 1.11
COL4A3BP-201ENST00000261415 TGFBRAP1Q8WUH2 860 aa21.98■■□□□ 1.11
COL4A3BP-201ENST00000261415 TTC12Q9H892 705 aaPredicted RBP21.98■■□□□ 1.11
COL4A3BP-201ENST00000261415 RPS6KB1P23443 525 aa21.97■■□□□ 1.11
COL4A3BP-201ENST00000261415 APOBEC3HQ6NTF7 200 aaKnown RBP21.97■■□□□ 1.11
COL4A3BP-201ENST00000261415 KRT222Q8N1A0 295 aa21.97■■□□□ 1.11
COL4A3BP-201ENST00000261415 SECISBP2LQ93073 1101 aaKnown RBP21.97■■□□□ 1.11
COL4A3BP-201ENST00000261415 FZD9O00144 591 aa21.97■■□□□ 1.11
COL4A3BP-201ENST00000261415 CTDSPL2Q05D32 466 aa21.97■■□□□ 1.11
COL4A3BP-201ENST00000261415 PPARAQ07869 468 aa21.97■■□□□ 1.11
COL4A3BP-201ENST00000261415 CTR9Q6PD62 1173 aa21.97■■□□□ 1.11
COL4A3BP-201ENST00000261415 AGBL3Q8NEM8 1001 aa21.97■■□□□ 1.11
COL4A3BP-201ENST00000261415 KIAA1524Q8TCG1 905 aa21.97■■□□□ 1.11
COL4A3BP-201ENST00000261415 EFCC1Q9HA90 598 aa21.97■■□□□ 1.11
COL4A3BP-201ENST00000261415 PCDHAC2Q9Y5I4 1007 aa21.97■■□□□ 1.11
COL4A3BP-201ENST00000261415 MINDY4BA8MYZ0 360 aa21.96■■□□□ 1.11
COL4A3BP-201ENST00000261415 HMGB1P09429 215 aaKnown RBP21.96■■□□□ 1.11
COL4A3BP-201ENST00000261415 CAPN2P17655 700 aa21.96■■□□□ 1.11
COL4A3BP-201ENST00000261415 LMNB1P20700 586 aa21.96■■□□□ 1.11
COL4A3BP-201ENST00000261415 BRD2P25440 801 aaKnown RBP21.96■■□□□ 1.11
COL4A3BP-201ENST00000261415 RBM5P52756 815 aaKnown RBP eCLIP21.96■■□□□ 1.11
COL4A3BP-201ENST00000261415 NCBP1Q09161 790 aaKnown RBP21.96■■□□□ 1.11
COL4A3BP-201ENST00000261415 TNIP1Q15025 636 aa21.96■■□□□ 1.11
COL4A3BP-201ENST00000261415 PDRG1Q9NUG6 133 aa21.96■■□□□ 1.11
COL4A3BP-201ENST00000261415 ARPP21Q9UBL0 812 aaPredicted RBP21.96■■□□□ 1.11
COL4A3BP-201ENST00000261415 USP17L12C9JPN9 530 aa21.96■■□□□ 1.11
COL4A3BP-201ENST00000261415 USP17L21D6R901 530 aa21.96■■□□□ 1.11
COL4A3BP-201ENST00000261415 ANAPC4Q9UJX5 808 aa21.96■■□□□ 1.11
COL4A3BP-201ENST00000261415 CYP2D7A0A087X1C5 515 aa21.95■■□□□ 1.1
COL4A3BP-201ENST00000261415 CDC42EP5Q6NZY7 148 aa21.95■■□□□ 1.1
COL4A3BP-201ENST00000261415 MAPKAPK5Q8IW41 473 aa21.95■■□□□ 1.1
COL4A3BP-201ENST00000261415 TCEANC2Q96MN5 208 aa21.95■■□□□ 1.1
COL4A3BP-201ENST00000261415 TRIM34Q9BYJ4 488 aa21.95■■□□□ 1.1
COL4A3BP-201ENST00000261415 MCM9Q9NXL9 1143 aa21.95■■□□□ 1.1
COL4A3BP-201ENST00000261415 FLT1P17948 1338 aa21.95■■□□□ 1.1
COL4A3BP-201ENST00000261415 AK2P54819 239 aa21.95■■□□□ 1.1
COL4A3BP-201ENST00000261415 NCOA7Q8NI08 942 aa21.95■■□□□ 1.1
COL4A3BP-201ENST00000261415 USP40Q9NVE5 1235 aa21.95■■□□□ 1.1
COL4A3BP-201ENST00000261415 HDAC9Q9UKV0 1011 aa21.95■■□□□ 1.1
COL4A3BP-201ENST00000261415 SMIM22K7EJ46 135 aa21.94■■□□□ 1.1
COL4A3BP-201ENST00000261415 USP17L8P0C7I0 530 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms