RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 TXLNGQ9NUQ3 528 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 HYOU1Q9Y4L1 999 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 SLC12A7Q9Y666 1083 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 UBXN1Q04323 297 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 ANKRD27Q96NW4 1050 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 CCDC68Q9H2F9 335 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 HOMER2Q9NSB8 354 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 CASP8Q14790 479 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 TAF11Q15544 211 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 EMBQ6PCB8 327 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 TRMT2AQ8IZ69 625 aaKnown RBP9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 HAUS1Q96CS2 278 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 CALML4Q96GE6 196 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 TCP11L1Q9NUJ3 509 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 EXOC1Q9NV70 894 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 SEPT11Q9NVA2 429 aaKnown RBP9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 CHCHD3Q9NX63 227 aaKnown RBP9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 TRIM35Q9UPQ4 493 aa9.3□□□□□ -0.92
SNCAIP-201ENST00000261367 TTC36A6NLP5 189 aa9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 SLC30A9Q6PML9 568 aa9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 KRI1Q8N9T8 703 aaKnown RBP9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 RAB3IL1Q8TBN0 382 aa9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 RRP36Q96EU6 259 aaKnown RBP9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 FAM114A2Q9NRY5 505 aa9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 TPX2Q9ULW0 747 aaKnown RBP9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 ATP2A2P16615 1042 aaKnown RBP9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 LRMPQ12912 555 aa9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 PARP9Q8IXQ6 854 aa9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 PRM3Q9NNZ6 103 aa9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 PAIP2BQ9ULR5 123 aaKnown RBP9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 SPG7Q9UQ90 795 aa9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 IQSEC2Q5JU85 1478 aa9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 DIP2BQ9P265 1576 aa9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 FERP16591 822 aa9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 HOXA7P31268 230 aaPredicted RBP9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 PLEKHO1Q53GL0 409 aaPredicted RBP9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 SYCE1Q8N0S2 351 aa9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 RHPN1Q8TCX5 695 aa9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 CCDC97Q96F63 343 aaPredicted RBP9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 CCDC169A6NNP5 214 aa9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 CEP85Q6P2H3 762 aa9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 TBC1D5Q92609 795 aa9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 PPP1R9AQ9ULJ8 1098 aa9.29□□□□□ -0.92
SNCAIP-201ENST00000261367 A0A1W2PQ27 194 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 A0A1W2PQ64 194 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 A0A1W2PQD8 194 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 ZNF213O14771 459 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 ZBTB7BO15156 539 aaPredicted RBP9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 METAP2P50579 478 aaKnown RBP eCLIP9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 ADALQ6DHV7 355 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 STXBP4Q6ZWJ1 553 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 TBC1D22AQ8WUA7 517 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 ARHGAP31Q2M1Z3 1444 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 RIMBP3CA6NJZ7 1639 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 RIMBP3BA6NNM3 1639 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 ST5P78524 1137 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 IFT88Q13099 833 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 GLE1Q53GS7 698 aaKnown RBP9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 CREB3L3Q68CJ9 461 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 NECAB1Q8N987 351 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 NECTIN2Q92692 538 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 RUNDC3BQ96NL0 473 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 CD163L1Q9NR16 1453 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 KIAA1468Q9P260 1216 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 RIMBP3Q9UFD9 1639 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 CSB-PGBD3P0DP91 1061 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 CUL3Q13618 768 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 VPS52Q8N1B4 723 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 FNBP4Q8N3X1 1017 aaPredicted RBP9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 C3orf20Q8ND61 904 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 CACTINQ8WUQ7 758 aaKnown RBP9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 CABP2Q9NPB3 220 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 KLC4Q9NSK0 619 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 ZRANB1Q9UGI0 708 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 ANKRD26Q9UPS8 1709 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 NRXN3Q9Y4C0 1643 aa9.28□□□□□ -0.92
SNCAIP-201ENST00000261367 SEC31AO94979 1220 aaKnown RBP9.27□□□□□ -0.92
SNCAIP-201ENST00000261367 RPS6KB1P23443 525 aa9.27□□□□□ -0.92
SNCAIP-201ENST00000261367 ISM2Q6H9L7 571 aa9.27□□□□□ -0.92
SNCAIP-201ENST00000261367 ST13P4Q8IZP2 240 aaPredicted RBP9.27□□□□□ -0.92
SNCAIP-201ENST00000261367 PPP1R14CQ8TAE6 165 aa9.27□□□□□ -0.92
SNCAIP-201ENST00000261367 ARHGEF2Q92974 986 aaKnown RBP9.27□□□□□ -0.92
SNCAIP-201ENST00000261367 BSDC1Q9NW68 430 aaPredicted RBP9.27□□□□□ -0.92
SNCAIP-201ENST00000261367 KIF13AQ9H1H9 1805 aa9.27□□□□□ -0.93
SNCAIP-201ENST00000261367 STMN1P16949 149 aa9.27□□□□□ -0.93
SNCAIP-201ENST00000261367 EIF3BP55884 814 aaKnown RBP9.27□□□□□ -0.93
SNCAIP-201ENST00000261367 SDCCAG8Q86SQ7 713 aaPredicted RBP9.27□□□□□ -0.93
SNCAIP-201ENST00000261367 OSBPL5Q9H0X9 879 aaPredicted RBP9.27□□□□□ -0.93
SNCAIP-201ENST00000261367 KCNK9Q9NPC2 374 aa9.27□□□□□ -0.93
SNCAIP-201ENST00000261367 PPANQ9NQ55 473 aaKnown RBP9.27□□□□□ -0.93
SNCAIP-201ENST00000261367 RAPGEF3O95398 923 aa9.27□□□□□ -0.93
SNCAIP-201ENST00000261367 CLTAP09496 248 aa9.27□□□□□ -0.93
SNCAIP-201ENST00000261367 TROVE2P10155 538 aaKnown RBP eCLIP9.27□□□□□ -0.93
SNCAIP-201ENST00000261367 DEUP1Q05D60 604 aa9.27□□□□□ -0.93
SNCAIP-201ENST00000261367 CSRNP2Q9H175 543 aa9.27□□□□□ -0.93
SNCAIP-201ENST00000261367 ANGPTL2Q9UKU9 493 aa9.27□□□□□ -0.93
SNCAIP-201ENST00000261367 PTPRMP28827 1452 aa9.27□□□□□ -0.93
SNCAIP-201ENST00000261367 NLRP1Q9C000 1473 aa9.27□□□□□ -0.93
SNCAIP-201ENST00000261367 DENND2CQ68D51 928 aa9.27□□□□□ -0.93
SNCAIP-201ENST00000261367 POLR3DP05423 398 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms