RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 KLHL40Q2TBA0 621 aa26.17■■□□□ 1.78
SIX3-201ENST00000260653 C12orf60Q5U649 245 aa26.17■■□□□ 1.78
SIX3-201ENST00000260653 TEX11Q8IYF3 940 aa26.17■■□□□ 1.78
SIX3-201ENST00000260653 TTF2Q9UNY4 1162 aaKnown RBP26.17■■□□□ 1.78
SIX3-201ENST00000260653 GOLGA8AA7E2F4 631 aa26.16■■□□□ 1.78
SIX3-201ENST00000260653 ECE2O60344 883 aa26.16■■□□□ 1.78
SIX3-201ENST00000260653 SLC3A2P08195 630 aaKnown RBP26.16■■□□□ 1.78
SIX3-201ENST00000260653 DPEP1P16444 411 aa26.16■■□□□ 1.78
SIX3-201ENST00000260653 NCLP19338 710 aaKnown RBP26.16■■□□□ 1.78
SIX3-201ENST00000260653 SEC23AQ15436 765 aa26.16■■□□□ 1.78
SIX3-201ENST00000260653 FAM173BQ6P4H8 233 aa26.16■■□□□ 1.78
SIX3-201ENST00000260653 TTLL6Q8N841 843 aa26.16■■□□□ 1.78
SIX3-201ENST00000260653 PLCG2P16885 1265 aa26.16■■□□□ 1.78
SIX3-201ENST00000260653 CC2D2BQ6DHV5 1058 aa26.16■■□□□ 1.78
SIX3-201ENST00000260653 SAP30BPQ9UHR5 308 aaKnown RBP26.16■■□□□ 1.78
SIX3-201ENST00000260653 KCNA3P22001 575 aa26.15■■□□□ 1.78
SIX3-201ENST00000260653 ENAHQ8N8S7 591 aaPredicted RBP26.15■■□□□ 1.78
SIX3-201ENST00000260653 ZSCAN10Q96SZ4 725 aaPredicted RBP26.15■■□□□ 1.78
SIX3-201ENST00000260653 FAM217BQ9NTX9 383 aaPredicted RBP26.15■■□□□ 1.78
SIX3-201ENST00000260653 ADAMTSL1Q8N6G6 1762 aa26.15■■□□□ 1.78
SIX3-201ENST00000260653 SCNN1DP51172 638 aa26.15■■□□□ 1.78
SIX3-201ENST00000260653 USP48Q86UV5 1035 aa26.15■■□□□ 1.78
SIX3-201ENST00000260653 GPT2Q8TD30 523 aa26.15■■□□□ 1.78
SIX3-201ENST00000260653 ORC3Q9UBD5 711 aaPredicted RBP26.15■■□□□ 1.78
SIX3-201ENST00000260653 PDE4BQ07343 736 aa26.14■■□□□ 1.78
SIX3-201ENST00000260653 DYNLL2Q96FJ2 89 aa26.14■■□□□ 1.78
SIX3-201ENST00000260653 DDX60LQ5H9U9 1706 aaKnown RBP26.14■■□□□ 1.78
SIX3-201ENST00000260653 KIF13BQ9NQT8 1826 aa26.14■■□□□ 1.78
SIX3-201ENST00000260653 FLT1P17948 1338 aa26.14■■□□□ 1.77
SIX3-201ENST00000260653 FIBPO43427 364 aa26.14■■□□□ 1.77
SIX3-201ENST00000260653 FAM47AQ5JRC9 791 aa26.14■■□□□ 1.77
SIX3-201ENST00000260653 TMTC2Q8N394 836 aa26.14■■□□□ 1.77
SIX3-201ENST00000260653 ROBO3Q96MS0 1386 aa26.13■■□□□ 1.77
SIX3-201ENST00000260653 KIAA2012Q0VF49 1180 aa26.13■■□□□ 1.77
SIX3-201ENST00000260653 SYNE3Q6ZMZ3 975 aa26.13■■□□□ 1.77
SIX3-201ENST00000260653 IQCA1Q86XH1 822 aa26.13■■□□□ 1.77
SIX3-201ENST00000260653 ATF5Q9Y2D1 282 aaPredicted RBP26.13■■□□□ 1.77
SIX3-201ENST00000260653 PLCD1P51178 756 aa26.13■■□□□ 1.77
SIX3-201ENST00000260653 AMOTL1Q8IY63 956 aa26.13■■□□□ 1.77
SIX3-201ENST00000260653 ZNF646O15015 1829 aaPredicted RBP26.12■■□□□ 1.77
SIX3-201ENST00000260653 GUCY1B3Q02153 619 aa26.12■■□□□ 1.77
SIX3-201ENST00000260653 RESTQ13127 1097 aa26.12■■□□□ 1.77
SIX3-201ENST00000260653 ZNF654Q8IZM8 581 aa26.12■■□□□ 1.77
SIX3-201ENST00000260653 TMEM87AQ8NBN3 555 aa26.12■■□□□ 1.77
SIX3-201ENST00000260653 NID2Q14112 1375 aa26.12■■□□□ 1.77
SIX3-201ENST00000260653 POLR3DP05423 398 aaPredicted RBP26.12■■□□□ 1.77
SIX3-201ENST00000260653 NTRK3Q16288 839 aa26.12■■□□□ 1.77
SIX3-201ENST00000260653 STRIP1Q5VSL9 837 aa26.12■■□□□ 1.77
SIX3-201ENST00000260653 FOCADQ5VW36 1801 aa26.12■■□□□ 1.77
SIX3-201ENST00000260653 NMT2O60551 498 aa26.11■■□□□ 1.77
SIX3-201ENST00000260653 PHKBQ93100 1093 aa26.11■■□□□ 1.77
SIX3-201ENST00000260653 MYH1P12882 1939 aa26.11■■□□□ 1.77
SIX3-201ENST00000260653 GADD45BO75293 160 aaPredicted RBP26.11■■□□□ 1.77
SIX3-201ENST00000260653 DACT2Q5SW24 774 aa26.11■■□□□ 1.77
SIX3-201ENST00000260653 PPIP5K2O43314 1243 aa26.1■■□□□ 1.77
SIX3-201ENST00000260653 CDKL5O76039 1030 aa26.1■■□□□ 1.77
SIX3-201ENST00000260653 CCDC93Q567U6 631 aa26.1■■□□□ 1.77
SIX3-201ENST00000260653 SUPT20HQ8NEM7 779 aa26.1■■□□□ 1.77
SIX3-201ENST00000260653 IFIT1BQ5T764 474 aaKnown RBP26.1■■□□□ 1.77
SIX3-201ENST00000260653 CPLX2Q6PUV4 134 aaKnown RBP26.1■■□□□ 1.77
SIX3-201ENST00000260653 SLC44A5Q8NCS7 719 aa26.1■■□□□ 1.77
SIX3-201ENST00000260653 NUP133Q8WUM0 1156 aa26.1■■□□□ 1.77
SIX3-201ENST00000260653 TSPY2A6NKD2 308 aa26.09■■□□□ 1.77
SIX3-201ENST00000260653 OTUD7BQ6GQQ9 843 aa26.09■■□□□ 1.77
SIX3-201ENST00000260653 KIAA0825Q8IV33 1275 aa26.09■■□□□ 1.77
SIX3-201ENST00000260653 RTN1Q16799 776 aa26.09■■□□□ 1.77
SIX3-201ENST00000260653 CAVIN1Q6NZI2 390 aaKnown RBP26.09■■□□□ 1.77
SIX3-201ENST00000260653 TEKT1Q969V4 418 aa26.09■■□□□ 1.77
SIX3-201ENST00000260653 USP17L3A6NCW0 530 aa26.08■■□□□ 1.77
SIX3-201ENST00000260653 USP17L4A6NCW7 530 aa26.08■■□□□ 1.77
SIX3-201ENST00000260653 USP17L1Q7RTZ2 530 aa26.08■■□□□ 1.77
SIX3-201ENST00000260653 C8orf76Q96K31 380 aa26.08■■□□□ 1.77
SIX3-201ENST00000260653 AIFM3Q96NN9 605 aa26.08■■□□□ 1.77
SIX3-201ENST00000260653 MTFR1LQ9H019 292 aa26.08■■□□□ 1.77
SIX3-201ENST00000260653 GJB4Q9NTQ9 266 aa26.08■■□□□ 1.77
SIX3-201ENST00000260653 ECM29Q5VYK3 1845 aa26.08■■□□□ 1.77
SIX3-201ENST00000260653 KRT85P78386 507 aa26.08■■□□□ 1.76
SIX3-201ENST00000260653 HHIPL2Q6UWX4 724 aa26.08■■□□□ 1.76
SIX3-201ENST00000260653 ZSCAN16Q9H4T2 348 aaPredicted RBP26.08■■□□□ 1.76
SIX3-201ENST00000260653 RCAN1P53805 252 aa26.07■■□□□ 1.76
SIX3-201ENST00000260653 PICALMQ13492 652 aa26.07■■□□□ 1.76
SIX3-201ENST00000260653 R3HDM1Q15032 1099 aaKnown RBP26.07■■□□□ 1.76
SIX3-201ENST00000260653 MKNK2Q9HBH9 465 aa26.07■■□□□ 1.76
SIX3-201ENST00000260653 FKBP1AP62942 108 aaKnown RBP26.07■■□□□ 1.76
SIX3-201ENST00000260653 RTKN2Q8IZC4 609 aa26.07■■□□□ 1.76
SIX3-201ENST00000260653 FANCBQ8NB91 859 aa26.07■■□□□ 1.76
SIX3-201ENST00000260653 YDJCA8MPS7 323 aa26.06■■□□□ 1.76
SIX3-201ENST00000260653 IARSP41252 1262 aaKnown RBP26.06■■□□□ 1.76
SIX3-201ENST00000260653 CRKP46108 304 aa26.06■■□□□ 1.76
SIX3-201ENST00000260653 APOBEC3HQ6NTF7 200 aaKnown RBP26.06■■□□□ 1.76
SIX3-201ENST00000260653 WDHD1O75717 1129 aaPredicted RBP26.06■■□□□ 1.76
SIX3-201ENST00000260653 MBD3O95983 291 aa26.06■■□□□ 1.76
SIX3-201ENST00000260653 POLD1P28340 1107 aa26.06■■□□□ 1.76
SIX3-201ENST00000260653 TFAP4Q01664 338 aa26.06■■□□□ 1.76
SIX3-201ENST00000260653 FBXO18Q8NFZ0 1043 aa26.06■■□□□ 1.76
SIX3-201ENST00000260653 DDX4Q9NQI0 724 aaKnown RBP26.06■■□□□ 1.76
SIX3-201ENST00000260653 USP40Q9NVE5 1235 aa26.06■■□□□ 1.76
SIX3-201ENST00000260653 RBM27Q9P2N5 1060 aaKnown RBP26.06■■□□□ 1.76
SIX3-201ENST00000260653 UBE2Q2LH0YL09 131 aa26.05■■□□□ 1.76
SIX3-201ENST00000260653 IFNAR1P17181 557 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms