RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 ZNF654Q8IZM8 581 aa16.93■□□□□ 0.3
TRAFD1-201ENST00000257604 CBX8Q9HC52 389 aa16.93■□□□□ 0.3
TRAFD1-201ENST00000257604 CNTNAP4Q9C0A0 1308 aa16.93■□□□□ 0.3
TRAFD1-201ENST00000257604 PRR5LQ6MZQ0 368 aa16.92■□□□□ 0.3
TRAFD1-201ENST00000257604 TGFBRAP1Q8WUH2 860 aa16.92■□□□□ 0.3
TRAFD1-201ENST00000257604 BBXQ8WY36 941 aaPredicted RBP16.92■□□□□ 0.3
TRAFD1-201ENST00000257604 TMEM87BQ96K49 555 aa16.92■□□□□ 0.3
TRAFD1-201ENST00000257604 DDX19AQ9NUU7 478 aaKnown RBP16.92■□□□□ 0.3
TRAFD1-201ENST00000257604 V9GY48 417 aaPredicted RBP16.92■□□□□ 0.3
TRAFD1-201ENST00000257604 G3V3G9 751 aa16.92■□□□□ 0.3
TRAFD1-201ENST00000257604 GOLGA6L19H0YKK7 550 aa16.92■□□□□ 0.3
TRAFD1-201ENST00000257604 CDKL5O76039 1030 aa16.92■□□□□ 0.3
TRAFD1-201ENST00000257604 KIF23Q02241 960 aaPredicted RBP16.92■□□□□ 0.3
TRAFD1-201ENST00000257604 DCAF8Q5TAQ9 597 aa16.92■□□□□ 0.3
TRAFD1-201ENST00000257604 CERKQ8TCT0 537 aa16.92■□□□□ 0.3
TRAFD1-201ENST00000257604 NSUN4Q96CB9 384 aaKnown RBP16.92■□□□□ 0.3
TRAFD1-201ENST00000257604 CLSTN2Q9H4D0 955 aa16.92■□□□□ 0.3
TRAFD1-201ENST00000257604 STX8Q9UNK0 236 aa16.92■□□□□ 0.3
TRAFD1-201ENST00000257604 CNNM2Q9H8M5 875 aa16.91■□□□□ 0.3
TRAFD1-201ENST00000257604 LDHBP07195 334 aaKnown RBP16.91■□□□□ 0.3
TRAFD1-201ENST00000257604 GNAT2P19087 354 aa16.91■□□□□ 0.3
TRAFD1-201ENST00000257604 PICALMQ13492 652 aa16.91■□□□□ 0.3
TRAFD1-201ENST00000257604 PLEKHA8P1O95397 391 aa16.91■□□□□ 0.3
TRAFD1-201ENST00000257604 ZSCAN20P17040 1043 aaPredicted RBP16.91■□□□□ 0.3
TRAFD1-201ENST00000257604 SAFBQ15424 915 aaKnown RBP eCLIP16.91■□□□□ 0.3
TRAFD1-201ENST00000257604 C11orf57Q6ZUT1 292 aaPredicted RBP16.91■□□□□ 0.3
TRAFD1-201ENST00000257604 IQCA1Q86XH1 822 aa16.91■□□□□ 0.3
TRAFD1-201ENST00000257604 RNF41Q9H4P4 317 aaPredicted RBP16.91■□□□□ 0.3
TRAFD1-201ENST00000257604 MKNK2Q9HBH9 465 aa16.91■□□□□ 0.3
TRAFD1-201ENST00000257604 SALL1Q9NSC2 1324 aa16.91■□□□□ 0.3
TRAFD1-201ENST00000257604 ANO1Q5XXA6 986 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 CTR9Q6PD62 1173 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 DIS3L2Q8IYB7 885 aaKnown RBP16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 OXER1Q8TDS5 423 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 MRPS27Q92552 414 aaKnown RBP16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 RIOK1Q9BRS2 568 aaKnown RBP16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 CRNKL1Q9BZJ0 848 aaKnown RBP16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 CPVLQ9H3G5 476 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 FAM217BQ9NTX9 383 aaPredicted RBP16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 RCOR1Q9UKL0 485 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 AKAP11Q9UKA4 1901 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 FAM205CA6NFA0 338 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 PTPN21Q16825 1174 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 CCDC186Q7Z3E2 898 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 KRT27Q7Z3Y8 459 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 PDCL2Q8N4E4 241 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 FANCBQ8NB91 859 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 KIAA1524Q8TCG1 905 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 MXD3Q9BW11 206 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 ANKRD2Q9GZV1 360 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 CABP5Q9NP86 173 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 ELP1O95163 1332 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 SPEF2Q9C093 1822 aa16.9■□□□□ 0.3
TRAFD1-201ENST00000257604 GPSM2P81274 684 aa16.89■□□□□ 0.3
TRAFD1-201ENST00000257604 DOK7Q18PE1 504 aa16.89■□□□□ 0.3
TRAFD1-201ENST00000257604 LINC00301Q8NCQ3 95 aa16.89■□□□□ 0.3
TRAFD1-201ENST00000257604 FAM200AQ8TCP9 573 aa16.89■□□□□ 0.3
TRAFD1-201ENST00000257604 ENAHQ8N8S7 591 aaPredicted RBP16.89■□□□□ 0.29
TRAFD1-201ENST00000257604 SH3RF3Q8TEJ3 882 aaPredicted RBP16.89■□□□□ 0.29
TRAFD1-201ENST00000257604 ZBTB9Q96C00 473 aa16.89■□□□□ 0.29
TRAFD1-201ENST00000257604 FUCA2Q9BTY2 467 aa16.89■□□□□ 0.29
TRAFD1-201ENST00000257604 MYH3P11055 1940 aa16.89■□□□□ 0.29
TRAFD1-201ENST00000257604 COL1A1P02452 1464 aaPredicted RBP16.89■□□□□ 0.29
TRAFD1-201ENST00000257604 TM4SF1P30408 202 aa16.89■□□□□ 0.29
TRAFD1-201ENST00000257604 ST5P78524 1137 aa16.89■□□□□ 0.29
TRAFD1-201ENST00000257604 FBXO33Q7Z6M2 555 aa16.89■□□□□ 0.29
TRAFD1-201ENST00000257604 ZNF622Q969S3 477 aaKnown RBP eCLIP16.89■□□□□ 0.292e-7■■□□□ 11.8
TRAFD1-201ENST00000257604 WDHD1O75717 1129 aaPredicted RBP16.88■□□□□ 0.29
TRAFD1-201ENST00000257604 APBA3O96018 575 aa16.88■□□□□ 0.29
TRAFD1-201ENST00000257604 GYS1P13807 737 aa16.88■□□□□ 0.29
TRAFD1-201ENST00000257604 EIF6P56537 245 aaKnown RBP16.88■□□□□ 0.29
TRAFD1-201ENST00000257604 RASGRP2Q7LDG7 609 aa16.88■□□□□ 0.29
TRAFD1-201ENST00000257604 NOL10Q9BSC4 688 aaKnown RBP16.88■□□□□ 0.29
TRAFD1-201ENST00000257604 DCP1AQ9NPI6 582 aaPredicted RBP16.88■□□□□ 0.29
TRAFD1-201ENST00000257604 SPTLC3Q9NUV7 552 aa16.88■□□□□ 0.29
TRAFD1-201ENST00000257604 RC3H1Q5TC82 1133 aaKnown RBP16.88■□□□□ 0.29
TRAFD1-201ENST00000257604 FILIP1Q7Z7B0 1213 aa16.88■□□□□ 0.29
TRAFD1-201ENST00000257604 CATIPQ7Z7H3 387 aa16.88■□□□□ 0.29
TRAFD1-201ENST00000257604 VAT1LQ9HCJ6 419 aa16.88■□□□□ 0.29
TRAFD1-201ENST00000257604 USP17L3A6NCW0 530 aa16.87■□□□□ 0.29
TRAFD1-201ENST00000257604 USP17L4A6NCW7 530 aa16.87■□□□□ 0.29
TRAFD1-201ENST00000257604 USP17L1Q7RTZ2 530 aa16.87■□□□□ 0.29
TRAFD1-201ENST00000257604 PLCD3Q8N3E9 789 aa16.87■□□□□ 0.29
TRAFD1-201ENST00000257604 STAG1Q8WVM7 1258 aa16.87■□□□□ 0.29
TRAFD1-201ENST00000257604 ZSCAN10Q96SZ4 725 aaPredicted RBP16.87■□□□□ 0.29
TRAFD1-201ENST00000257604 GOLGA8HP0CJ92 632 aa16.87■□□□□ 0.29
TRAFD1-201ENST00000257604 GTF2IP78347 998 aa16.87■□□□□ 0.29
TRAFD1-201ENST00000257604 FAM160A1Q05DH4 1040 aa16.87■□□□□ 0.29
TRAFD1-201ENST00000257604 GRAPQ13588 217 aa16.87■□□□□ 0.29
TRAFD1-201ENST00000257604 ARID5BQ14865 1188 aa16.87■□□□□ 0.29
TRAFD1-201ENST00000257604 GRAPLQ8TC17 118 aaPredicted RBP16.87■□□□□ 0.29
TRAFD1-201ENST00000257604 SLURP2P0DP57 97 aa16.87■□□□□ 0.29
TRAFD1-201ENST00000257604 TFAP4Q01664 338 aa16.87■□□□□ 0.29
TRAFD1-201ENST00000257604 ATP2B2Q01814 1243 aa16.87■□□□□ 0.29
TRAFD1-201ENST00000257604 SLC10A5Q5PT55 438 aa16.87■□□□□ 0.29
TRAFD1-201ENST00000257604 AOPEPQ8N6M6 819 aa16.87■□□□□ 0.29
TRAFD1-201ENST00000257604 LAMA4Q16363 1823 aa16.86■□□□□ 0.29
TRAFD1-201ENST00000257604 VEGFAP15692 232 aaPredicted RBP16.86■□□□□ 0.29
TRAFD1-201ENST00000257604 SCNN1DP51172 638 aa16.86■□□□□ 0.29
TRAFD1-201ENST00000257604 GRIN1Q05586 938 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms