RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 NEK4P51957 841 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 KLC1Q07866 573 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 MRPL28Q13084 256 aaKnown RBP7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 FLCNQ8NFG4 579 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 RSPH9Q9H1X1 276 aaPredicted RBP7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 SH2D4AQ9H788 454 aa7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 PUF60Q9UHX1 559 aaKnown RBP7.53□□□□□ -1.2
PDGFRA-201ENST00000257290 PRKAR2BP31323 418 aa7.52□□□□□ -1.2
PDGFRA-201ENST00000257290 THOC7Q6I9Y2 204 aaKnown RBP7.52□□□□□ -1.2
PDGFRA-201ENST00000257290 CWC27Q6UX04 472 aaKnown RBP7.52□□□□□ -1.2
PDGFRA-201ENST00000257290 NME8Q8N427 588 aa7.52□□□□□ -1.2
PDGFRA-201ENST00000257290 DRAXINQ8NBI3 349 aaPredicted RBP7.52□□□□□ -1.2
PDGFRA-201ENST00000257290 OPTNQ96CV9 577 aa7.52□□□□□ -1.2
PDGFRA-201ENST00000257290 RAB3IPQ96QF0 476 aaPredicted RBP7.52□□□□□ -1.2
PDGFRA-201ENST00000257290 KRT82Q9NSB4 513 aa7.52□□□□□ -1.2
PDGFRA-201ENST00000257290 TOP1P11387 765 aaKnown RBP7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 VDRP11473 427 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 UBE2HP62256 183 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 KAZNQ674X7 775 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 PARD3BQ8TEW8 1205 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 PPP1R9AQ9ULJ8 1098 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 BZW2Q9Y6E2 419 aaKnown RBP7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 ANKRD36BQ8N2N9 1353 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 CLASP1Q7Z460 1538 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 SMIM23A6NLE4 172 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 APOEP02649 317 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 SKIP12755 728 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 GSCP56915 257 aaPredicted RBP7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 PDE3AQ14432 1141 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 PHLDB3Q6NSJ2 640 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 SYNCQ9H7C4 482 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 DDX19AQ9NUU7 478 aaKnown RBP7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 EMC3Q9P0I2 261 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 SUCLA2Q9P2R7 463 aaPredicted RBP7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 TSPYL4Q9UJ04 414 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 PLXNC1O60486 1568 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 ARPC4-TTLL3A0A0A6YYG9 625 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 GIGYF1O75420 1035 aaPredicted RBP7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 STMN1P16949 149 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 TEKT4Q8WW24 435 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 PRPF31Q8WWY3 499 aaKnown RBP7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 RAPGEF4Q8WZA2 1011 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 NLRP2Q9NX02 1062 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 CTTNBP2NLQ9P2B4 639 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 TBC1D2BQ9UPU7 963 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 TMA7Q9Y2S6 64 aaKnown RBP7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 PLEKHG2Q9H7P9 1386 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 ASXL1Q8IXJ9 1541 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 TMEM232C9JQI7 657 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 GOLGA8KD6RF30 607 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 CHMP4BP1P59074 171 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 SKAP1Q86WV1 359 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 ARHGEF1Q92888 912 aaKnown RBP7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 MPHOSPH8Q99549 860 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 BCL2L13Q9BXK5 485 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 FAM129AQ9BZQ8 928 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 STK24Q9Y6E0 443 aa7.52□□□□□ -1.21
PDGFRA-201ENST00000257290 TUBA4AP68366 448 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 PCMTD1Q96MG8 357 aaPredicted RBP7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 STMN4Q9H169 189 aaPredicted RBP7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 CCDC68Q9H2F9 335 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 MGEA5O60502 916 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 OPHN1O60890 802 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 WAPLQ7Z5K2 1190 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 PDLIM2Q96JY6 352 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 R3HDM2Q9Y2K5 976 aaKnown RBP7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 CTIFO43310 598 aaKnown RBP7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 HSPA1AP0DMV8 641 aaKnown RBP7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 HSPA1BP0DMV9 641 aaKnown RBP7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 PLEKHO1Q53GL0 409 aaPredicted RBP7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 FAM186BQ8IYM0 893 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 RUFY2Q8WXA3 655 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 SIKE1Q9BRV8 207 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 SPTLC3Q9NUV7 552 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 ZNF232Q9UNY5 417 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 ELL2O00472 640 aaPredicted RBP7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 EVI5O60447 810 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 RHOXF2BP0C7M4 288 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 PAFAH1B1P43034 410 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 GUCY2FP51841 1108 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 AIMP1Q12904 312 aaKnown RBP7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 CEP78Q5JTW2 689 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 NBPF14Q5TI25 921 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 MAIP1Q8WWC4 291 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 RRP36Q96EU6 259 aaKnown RBP7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 OLFM3Q96PB7 478 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 CCT7Q99832 543 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 RHOXF2Q9BQY4 288 aa7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 FNBP4Q8N3X1 1017 aaPredicted RBP7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 HELBQ8NG08 1087 aaPredicted RBP7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 CACTINQ8WUQ7 758 aaKnown RBP7.51□□□□□ -1.21
PDGFRA-201ENST00000257290 POTEFA5A3E0 1075 aa7.5□□□□□ -1.21
PDGFRA-201ENST00000257290 MRPS35P82673 323 aaKnown RBP7.5□□□□□ -1.21
PDGFRA-201ENST00000257290 CEP70Q8NHQ1 597 aa7.5□□□□□ -1.21
PDGFRA-201ENST00000257290 OSBPL10Q9BXB5 764 aa7.5□□□□□ -1.21
PDGFRA-201ENST00000257290 ATP6V0A4Q9HBG4 840 aa7.5□□□□□ -1.21
PDGFRA-201ENST00000257290 HDAC6Q9UBN7 1215 aa7.5□□□□□ -1.21
PDGFRA-201ENST00000257290 TCEAL9Q9UHQ7 104 aa7.5□□□□□ -1.21
PDGFRA-201ENST00000257290 MLH3Q9UHC1 1453 aa7.5□□□□□ -1.21
PDGFRA-201ENST00000257290 WDR46O15213 610 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms