RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 PSMA7O14818 248 aa15.2■□□□□ 0.02
PRPF38A-201ENST00000257181 ARHGEF16Q5VV41 709 aa15.2■□□□□ 0.02
PRPF38A-201ENST00000257181 SLFN12Q8IYM2 578 aa15.2■□□□□ 0.02
PRPF38A-201ENST00000257181 ARMT1Q9H993 441 aa15.2■□□□□ 0.02
PRPF38A-201ENST00000257181 KDM4FA0A1W2PPD8 638 aa15.2■□□□□ 0.02
PRPF38A-201ENST00000257181 ASNSP08243 561 aa15.2■□□□□ 0.02
PRPF38A-201ENST00000257181 ATF7P17544 494 aaPredicted RBP15.2■□□□□ 0.02
PRPF38A-201ENST00000257181 LIG1P18858 919 aa15.2■□□□□ 0.02
PRPF38A-201ENST00000257181 TRIM6Q9C030 488 aaPredicted RBP15.2■□□□□ 0.02
PRPF38A-201ENST00000257181 MLXIPQ9HAP2 919 aa15.2■□□□□ 0.02
PRPF38A-201ENST00000257181 MRE11P49959 708 aa15.2■□□□□ 0.02
PRPF38A-201ENST00000257181 KIAA0825Q8IV33 1275 aa15.2■□□□□ 0.02
PRPF38A-201ENST00000257181 ANGEL1Q9UNK9 670 aaKnown RBP15.2■□□□□ 0.02
PRPF38A-201ENST00000257181 PRPF40AO75400 957 aaKnown RBP15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 UBXN2AP68543 259 aa15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 NONOQ15233 471 aaKnown RBP eCLIP15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 BEND3Q5T5X7 828 aa15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 ANKRD35Q8N283 1001 aa15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 TSPYL6Q8N831 410 aa15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 QRICH2Q9H0J4 1663 aa15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 GNAT1P11488 350 aa15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 MTIF2P46199 727 aaKnown RBP15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 DOK7Q18PE1 504 aa15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 NT5C3AQ9H0P0 336 aa15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 MAPKAPK5Q8IW41 473 aa15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 ZBTB8OSQ8IWT0 167 aa15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 LRRIQ1Q96JM4 1722 aa15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 TAF5LO75529 589 aa15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 GBP2P32456 591 aaPredicted RBP15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 PPARAQ07869 468 aa15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 MFSD14CQ5VZR4 134 aa15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 TBC1D9Q6ZT07 1266 aa15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 ZNF532Q9HCE3 1301 aa15.19■□□□□ 0.02
PRPF38A-201ENST00000257181 CCT2P78371 535 aaKnown RBP15.18■□□□□ 0.02
PRPF38A-201ENST00000257181 Q6ZUG5 572 aa15.18■□□□□ 0.02
PRPF38A-201ENST00000257181 HOXC10Q9NYD6 342 aa15.18■□□□□ 0.02
PRPF38A-201ENST00000257181 ZNF215Q9UL58 517 aaPredicted RBP15.18■□□□□ 0.02
PRPF38A-201ENST00000257181 ZNRF3Q9ULT6 936 aa15.18■□□□□ 0.02
PRPF38A-201ENST00000257181 RRAGBQ5VZM2 374 aa15.18■□□□□ 0.02
PRPF38A-201ENST00000257181 FILIP1Q7Z7B0 1213 aa15.18■□□□□ 0.02
PRPF38A-201ENST00000257181 SSH3Q8TE77 659 aa15.18■□□□□ 0.02
PRPF38A-201ENST00000257181 CSRNP1Q96S65 589 aa15.18■□□□□ 0.02
PRPF38A-201ENST00000257181 GPCPD1Q9NPB8 672 aa15.18■□□□□ 0.02
PRPF38A-201ENST00000257181 AKNAD1Q5T1N1 836 aa15.18■□□□□ 0.02
PRPF38A-201ENST00000257181 GIMAP6Q6P9H5 292 aa15.18■□□□□ 0.02
PRPF38A-201ENST00000257181 ZBTB7AO95365 584 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 CYP19A1P11511 503 aaPredicted RBP15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 CREB3L3Q68CJ9 461 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 RCSD1Q6JBY9 416 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 ZBTB7BO15156 539 aaPredicted RBP15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 USP17L2Q6R6M4 530 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 NSMFQ6X4W1 530 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 DBNDD2Q9BQY9 259 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 PAGR1Q9BTK6 254 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 BACH2Q9BYV9 841 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 SYNCQ9H7C4 482 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 WWC3Q9ULE0 1092 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 SSX2IPQ9Y2D8 614 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 ABCC4O15439 1325 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 GJB2P29033 226 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 NCAPG2Q86XI2 1143 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 SMC5Q8IY18 1101 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 ARHGEF35A5YM69 484 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 NOP2P46087 812 aaKnown RBP15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 R3HDM1Q15032 1099 aaKnown RBP15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 CCDC183Q5T5S1 534 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 RETREG2Q8NC44 543 aa15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 ARHGEF1Q92888 912 aaKnown RBP15.17■□□□□ 0.02
PRPF38A-201ENST00000257181 NEMFO60524 1076 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 TRIM28Q13263 835 aaKnown RBP15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 KIAA1328Q86T90 577 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 EHBP1Q8NDI1 1231 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 RBM46Q8TBY0 533 aaKnown RBP15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 CD2APQ9Y5K6 639 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 TCP10Q12799 353 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 FBXO11Q86XK2 927 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 NOX5Q96PH1 765 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 PPP2R3BQ9Y5P8 575 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 ITSN1Q15811 1721 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 ARHGAP23Q9P227 1491 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 SV2BQ7L1I2 683 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 CALUO43852 315 aaPredicted RBP15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 FLOT1O75955 427 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 PPP2R5AQ15172 486 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 WDR44Q5JSH3 913 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 FAM193BQ96PV7 902 aaPredicted RBP15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 ZSCAN12O43309 604 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 MCM3P25205 808 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 ACTN2P35609 894 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 SSR1P43307 286 aaKnown RBP15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 RUFY3Q7L099 469 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 GOLGA5Q8TBA6 731 aa15.16■□□□□ 0.02
PRPF38A-201ENST00000257181 MST1RQ04912 1400 aa15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 LMNB1P20700 586 aa15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 SEPT7Q16181 437 aaKnown RBP15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 SPOUT1Q5T280 376 aaKnown RBP15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 HAUS7Q99871 368 aa15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 ADPGKQ9BRR6 497 aa15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 TTLL1O95922 423 aa15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 PRKG1Q13976 671 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms