RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ADD1P35611 737 aaKnown RBP22.13■■□□□ 1.13
TRIM47-201ENST00000254816 C12orf60Q5U649 245 aa22.13■■□□□ 1.13
TRIM47-201ENST00000254816 DYNLL2Q96FJ2 89 aa22.13■■□□□ 1.13
TRIM47-201ENST00000254816 UBAC1Q9BSL1 405 aa22.13■■□□□ 1.13
TRIM47-201ENST00000254816 SUGT1Q9Y2Z0 365 aa22.13■■□□□ 1.13
TRIM47-201ENST00000254816 ERICH2A1L162 156 aa22.12■■□□□ 1.13
TRIM47-201ENST00000254816 ZBTB43O43298 467 aa22.12■■□□□ 1.13
TRIM47-201ENST00000254816 NCLP19338 710 aaKnown RBP22.12■■□□□ 1.13
TRIM47-201ENST00000254816 KIAA2012Q0VF49 1180 aa22.12■■□□□ 1.13
TRIM47-201ENST00000254816 SART3Q15020 963 aaKnown RBP22.12■■□□□ 1.13
TRIM47-201ENST00000254816 MTFR1LQ9H019 292 aa22.12■■□□□ 1.13
TRIM47-201ENST00000254816 ECM29Q5VYK3 1845 aa22.12■■□□□ 1.13
TRIM47-201ENST00000254816 TNKSO95271 1327 aa22.12■■□□□ 1.13
TRIM47-201ENST00000254816 PPIP5K2O43314 1243 aa22.11■■□□□ 1.13
TRIM47-201ENST00000254816 FDPSP14324 419 aaKnown RBP22.11■■□□□ 1.13
TRIM47-201ENST00000254816 CDC27P30260 824 aa22.11■■□□□ 1.13
TRIM47-201ENST00000254816 HMGN5P82970 282 aaKnown RBP22.11■■□□□ 1.13
TRIM47-201ENST00000254816 FAM47AQ5JRC9 791 aa22.11■■□□□ 1.13
TRIM47-201ENST00000254816 SLC12A7Q9Y666 1083 aa22.11■■□□□ 1.13
TRIM47-201ENST00000254816 PLCD1P51178 756 aa22.11■■□□□ 1.13
TRIM47-201ENST00000254816 CCDC93Q567U6 631 aa22.11■■□□□ 1.13
TRIM47-201ENST00000254816 PPP1R1BQ9UD71 204 aaPredicted RBP22.11■■□□□ 1.13
TRIM47-201ENST00000254816 FLT1P17948 1338 aa22.11■■□□□ 1.13
TRIM47-201ENST00000254816 CPLX1O14810 134 aa22.1■■□□□ 1.13
TRIM47-201ENST00000254816 SLC3A2P08195 630 aaKnown RBP22.1■■□□□ 1.13
TRIM47-201ENST00000254816 POLD1P28340 1107 aa22.1■■□□□ 1.13
TRIM47-201ENST00000254816 KIAA0825Q8IV33 1275 aa22.1■■□□□ 1.13
TRIM47-201ENST00000254816 CNPY2Q9Y2B0 182 aa22.1■■□□□ 1.13
TRIM47-201ENST00000254816 GOLGA8AA7E2F4 631 aa22.1■■□□□ 1.13
TRIM47-201ENST00000254816 DHX16O60231 1041 aaKnown RBP22.1■■□□□ 1.13
TRIM47-201ENST00000254816 POLR3DP05423 398 aaPredicted RBP22.1■■□□□ 1.13
TRIM47-201ENST00000254816 PLCG2P16885 1265 aa22.1■■□□□ 1.13
TRIM47-201ENST00000254816 SEC23AQ15436 765 aa22.1■■□□□ 1.13
TRIM47-201ENST00000254816 DACT2Q5SW24 774 aa22.1■■□□□ 1.13
TRIM47-201ENST00000254816 SUPT20HQ8NEM7 779 aa22.1■■□□□ 1.13
TRIM47-201ENST00000254816 UPF1Q92900 1129 aaKnown RBP eCLIP22.1■■□□□ 1.13
TRIM47-201ENST00000254816 ZSCAN10Q96SZ4 725 aaPredicted RBP22.1■■□□□ 1.13
TRIM47-201ENST00000254816 PSDA5PKW4 1024 aaPredicted RBP22.09■■□□□ 1.13
TRIM47-201ENST00000254816 H3BQV1 296 aa22.09■■□□□ 1.13
TRIM47-201ENST00000254816 ORC4O43929 436 aa22.09■■□□□ 1.13
TRIM47-201ENST00000254816 NMT2O60551 498 aa22.09■■□□□ 1.13
TRIM47-201ENST00000254816 PCP11498 1178 aaKnown RBP22.09■■□□□ 1.13
TRIM47-201ENST00000254816 PDE4BQ07343 736 aa22.09■■□□□ 1.13
TRIM47-201ENST00000254816 IFFO2Q5TF58 517 aa22.09■■□□□ 1.13
TRIM47-201ENST00000254816 STRIP1Q5VSL9 837 aa22.09■■□□□ 1.13
TRIM47-201ENST00000254816 FAM173BQ6P4H8 233 aa22.09■■□□□ 1.13
TRIM47-201ENST00000254816 CERS3Q8IU89 383 aa22.09■■□□□ 1.13
TRIM47-201ENST00000254816 YDJCA8MPS7 323 aa22.09■■□□□ 1.13
TRIM47-201ENST00000254816 PICALMQ13492 652 aa22.09■■□□□ 1.13
TRIM47-201ENST00000254816 KLHL34Q8N239 644 aa22.09■■□□□ 1.13
TRIM47-201ENST00000254816 ENAHQ8N8S7 591 aaPredicted RBP22.09■■□□□ 1.13
TRIM47-201ENST00000254816 CHMP4CQ96CF2 233 aa22.09■■□□□ 1.13
TRIM47-201ENST00000254816 FAM217BQ9NTX9 383 aaPredicted RBP22.09■■□□□ 1.13
TRIM47-201ENST00000254816 ISY1Q9ULR0 285 aaKnown RBP22.09■■□□□ 1.13
TRIM47-201ENST00000254816 PCDHAC2Q9Y5I4 1007 aa22.09■■□□□ 1.13
TRIM47-201ENST00000254816 BRCA1P38398 1863 aaKnown RBP22.08■■□□□ 1.13
TRIM47-201ENST00000254816 USP17L3A6NCW0 530 aa22.08■■□□□ 1.13
TRIM47-201ENST00000254816 USP17L4A6NCW7 530 aa22.08■■□□□ 1.13
TRIM47-201ENST00000254816 DNM1Q05193 864 aaKnown RBP22.08■■□□□ 1.13
TRIM47-201ENST00000254816 CAVIN1Q6NZI2 390 aaKnown RBP22.08■■□□□ 1.13
TRIM47-201ENST00000254816 USP17L1Q7RTZ2 530 aa22.08■■□□□ 1.13
TRIM47-201ENST00000254816 AMOTL1Q8IY63 956 aa22.08■■□□□ 1.13
TRIM47-201ENST00000254816 FAM43AQ8N2R8 423 aa22.08■■□□□ 1.13
TRIM47-201ENST00000254816 SLC44A5Q8NCS7 719 aa22.08■■□□□ 1.13
TRIM47-201ENST00000254816 PSME4Q14997 1843 aa22.08■■□□□ 1.13
TRIM47-201ENST00000254816 GUCY1B3Q02153 619 aa22.08■■□□□ 1.12
TRIM47-201ENST00000254816 SYNE3Q6ZMZ3 975 aa22.08■■□□□ 1.12
TRIM47-201ENST00000254816 MTA3Q9BTC8 594 aa22.08■■□□□ 1.12
TRIM47-201ENST00000254816 ZNF277Q9NRM2 450 aaPredicted RBP22.08■■□□□ 1.12
TRIM47-201ENST00000254816 MYH15Q9Y2K3 1946 aa22.08■■□□□ 1.12
TRIM47-201ENST00000254816 IQCA1Q86XH1 822 aa22.07■■□□□ 1.12
TRIM47-201ENST00000254816 RTKN2Q8IZC4 609 aa22.07■■□□□ 1.12
TRIM47-201ENST00000254816 PHKBQ93100 1093 aa22.07■■□□□ 1.12
TRIM47-201ENST00000254816 TEKT1Q969V4 418 aa22.07■■□□□ 1.12
TRIM47-201ENST00000254816 ORC3Q9UBD5 711 aaPredicted RBP22.07■■□□□ 1.12
TRIM47-201ENST00000254816 CRKP46108 304 aa22.06■■□□□ 1.12
TRIM47-201ENST00000254816 ZNF654Q8IZM8 581 aa22.06■■□□□ 1.12
TRIM47-201ENST00000254816 NUP133Q8WUM0 1156 aa22.06■■□□□ 1.12
TRIM47-201ENST00000254816 USP40Q9NVE5 1235 aa22.06■■□□□ 1.12
TRIM47-201ENST00000254816 PIM2Q9P1W9 311 aa22.06■■□□□ 1.12
TRIM47-201ENST00000254816 ATP6V1DQ9Y5K8 247 aa22.06■■□□□ 1.12
TRIM47-201ENST00000254816 COL4A5P29400 1685 aa22.06■■□□□ 1.12
TRIM47-201ENST00000254816 ROBO3Q96MS0 1386 aa22.06■■□□□ 1.12
TRIM47-201ENST00000254816 TSPY2A6NKD2 308 aa22.06■■□□□ 1.12
TRIM47-201ENST00000254816 PDIA4P13667 645 aaKnown RBP22.06■■□□□ 1.12
TRIM47-201ENST00000254816 TGFB2P61812 414 aa22.06■■□□□ 1.12
TRIM47-201ENST00000254816 USP48Q86UV5 1035 aa22.06■■□□□ 1.12
TRIM47-201ENST00000254816 TAOK2Q9UL54 1235 aa22.06■■□□□ 1.12
TRIM47-201ENST00000254816 IFIT1BQ5T764 474 aaKnown RBP22.05■■□□□ 1.12
TRIM47-201ENST00000254816 APOBEC3HQ6NTF7 200 aaKnown RBP22.05■■□□□ 1.12
TRIM47-201ENST00000254816 HHIPL2Q6UWX4 724 aa22.05■■□□□ 1.12
TRIM47-201ENST00000254816 TMTC2Q8N394 836 aa22.05■■□□□ 1.12
TRIM47-201ENST00000254816 GPT2Q8TD30 523 aa22.05■■□□□ 1.12
TRIM47-201ENST00000254816 DDX4Q9NQI0 724 aaKnown RBP22.05■■□□□ 1.12
TRIM47-201ENST00000254816 KIF3AQ9Y496 699 aa22.05■■□□□ 1.12
TRIM47-201ENST00000254816 NTRK3Q16288 839 aa22.05■■□□□ 1.12
TRIM47-201ENST00000254816 OTUD7BQ6GQQ9 843 aa22.05■■□□□ 1.12
TRIM47-201ENST00000254816 PSMD1Q99460 953 aa22.05■■□□□ 1.12
TRIM47-201ENST00000254816 MKNK2Q9HBH9 465 aa22.05■■□□□ 1.12
TRIM47-201ENST00000254816 GJB4Q9NTQ9 266 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms