RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 C11orf57Q6ZUT1 292 aaPredicted RBP4.77□□□□□ -1.65
UBE4A-201ENST00000252108 FOXP4Q8IVH2 680 aaPredicted RBP4.77□□□□□ -1.65
UBE4A-201ENST00000252108 ZFYP08048 801 aaPredicted RBP4.77□□□□□ -1.65
UBE4A-201ENST00000252108 SLC3A2P08195 630 aaKnown RBP4.77□□□□□ -1.65
UBE4A-201ENST00000252108 ADRA2BP18089 450 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 KIF23Q02241 960 aaPredicted RBP4.77□□□□□ -1.65
UBE4A-201ENST00000252108 C3orf67Q6ZVT6 689 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 SH3RF1Q7Z6J0 888 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 FBXO18Q8NFZ0 1043 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 MPHOSPH8Q99549 860 aa4.77□□□□□ -1.65
UBE4A-201ENST00000252108 OSBPL5Q9H0X9 879 aaPredicted RBP4.77□□□□□ -1.65
UBE4A-201ENST00000252108 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.77□□□□□ -1.65
UBE4A-201ENST00000252108 MYH8P13535 1937 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 CDC27P30260 824 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 LIFRP42702 1097 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 SLC35G1Q2M3R5 365 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 TTC5Q8N0Z6 440 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 FSIP1Q8NA03 581 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 TEX13AQ9BXU3 409 aaPredicted RBP4.76□□□□□ -1.65
UBE4A-201ENST00000252108 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.76□□□□□ -1.655e-6■■□□□ 11.5
UBE4A-201ENST00000252108 SIL1Q9H173 461 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 CNTNAP4Q9C0A0 1308 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 CCDC69A6NI79 296 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 A6NNZ2 444 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 GSG1L2A8MUP6 293 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 CASQ1P31415 396 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 AIMP1Q12904 312 aaKnown RBP4.76□□□□□ -1.65
UBE4A-201ENST00000252108 TUBB8Q3ZCM7 444 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 CCDC93Q567U6 631 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 PTPDC1A2A3K4 754 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 TOP1P11387 765 aaKnown RBP4.76□□□□□ -1.65
UBE4A-201ENST00000252108 ZAP70P43403 619 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 TBX2Q13207 712 aaPredicted RBP4.76□□□□□ -1.65
UBE4A-201ENST00000252108 PLCD3Q8N3E9 789 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 CEP112Q8N8E3 955 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 PRDM10Q9NQV6 1147 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 ONECUT3O60422 494 aaPredicted RBP4.76□□□□□ -1.65
UBE4A-201ENST00000252108 YEATS4O95619 227 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 AKAP17AQ02040 695 aaKnown RBP4.76□□□□□ -1.65
UBE4A-201ENST00000252108 PPFIBP1Q86W92 1011 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 ARFGAP3Q9NP61 516 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 ZHX1Q9UKY1 873 aaPredicted RBP4.76□□□□□ -1.65
UBE4A-201ENST00000252108 RAD21O60216 631 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 BMP15O95972 392 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 PBX1P40424 430 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 SART3Q15020 963 aaKnown RBP4.76□□□□□ -1.65
UBE4A-201ENST00000252108 SF3B3Q15393 1217 aaKnown RBP4.76□□□□□ -1.65
UBE4A-201ENST00000252108 PKN1Q16512 942 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 IMMTQ16891 758 aaKnown RBP4.76□□□□□ -1.65
UBE4A-201ENST00000252108 CKAP2LQ8IYA6 745 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 STAG1Q8WVM7 1258 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 BRMS1Q9HCU9 246 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 PCDHA7Q9UN72 937 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 SCN9AQ15858 1988 aa4.76□□□□□ -1.65
UBE4A-201ENST00000252108 ZNF18P17022 549 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 ARID5BQ14865 1188 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 CAMK4Q16566 473 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 CT47A1Q5JQC4 288 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-201ENST00000252108 STK11IPQ8N1F8 1099 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 ZNF830Q96NB3 372 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-201ENST00000252108 UBXN6Q9BZV1 441 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 DNAI1Q9UI46 699 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 AKAP2Q9Y2D5 859 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 UBE2Q2LH0YL09 131 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 EDIL3O43854 480 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 SUSD4Q5VX71 490 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 ADALQ6DHV7 355 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 DDX54Q8TDD1 881 aaKnown RBP4.75□□□□□ -1.65
UBE4A-201ENST00000252108 C8orf76Q96K31 380 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 SEC31BQ9NQW1 1179 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 DDX41Q9UJV9 622 aaKnown RBP4.75□□□□□ -1.65
UBE4A-201ENST00000252108 SMIM22K7EJ46 135 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 KIF5CO60282 957 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 CDR1P51861 262 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 APOBRQ0VD83 1088 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 RASGRF1Q13972 1273 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 CCDC158Q5M9N0 1113 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 SHC4Q6S5L8 630 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 C15orf52Q6ZUT6 534 aaKnown RBP4.75□□□□□ -1.65
UBE4A-201ENST00000252108 CTAGE1Q96RT6 745 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 DNAJC25Q9H1X3 360 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 WWC3Q9ULE0 1092 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 SLX4Q8IY92 1834 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 PHLPP2Q6ZVD8 1323 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 GOLIM4O00461 696 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 CCDC102BQ68D86 513 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 EHBP1Q8NDI1 1231 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 GOLGA1Q92805 767 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 IQSEC3Q9UPP2 1182 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-201ENST00000252108 MROH5Q6ZUA9 1318 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 ERICH2A1L162 156 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 ADAMTS3O15072 1205 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 MYCNP04198 464 aaPredicted RBP4.75□□□□□ -1.65
UBE4A-201ENST00000252108 FERMT3Q86UX7 667 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 LRRC8AQ8IWT6 810 aa4.75□□□□□ -1.65
UBE4A-201ENST00000252108 WTIPA6NIX2 430 aaPredicted RBP4.74□□□□□ -1.65
UBE4A-201ENST00000252108 WNT7AO00755 349 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 IGSF3O75054 1194 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 PHKA1P46020 1223 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 SPAG1Q07617 926 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms