RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 DHX36Q9H2U1 1008 aaKnown RBP25.79■■□□□ 1.72
NEDD8-201ENST00000250495 AATFQ9NY61 560 aaKnown RBP eCLIP25.79■■□□□ 1.72
NEDD8-201ENST00000250495 PI4KBQ9UBF8 816 aa25.79■■□□□ 1.72
NEDD8-201ENST00000250495 HERC5Q9UII4 1024 aaKnown RBP25.79■■□□□ 1.72
NEDD8-201ENST00000250495 FAM196BA6NMK8 535 aa25.78■■□□□ 1.72
NEDD8-201ENST00000250495 MYCP01106 439 aaPredicted RBP25.78■■□□□ 1.72
NEDD8-201ENST00000250495 CENPFP49454 3210 aa25.77■■□□□ 1.72
NEDD8-201ENST00000250495 CAP2P40123 477 aa25.77■■□□□ 1.72
NEDD8-201ENST00000250495 SMCR8Q8TEV9 937 aaPredicted RBP25.77■■□□□ 1.72
NEDD8-201ENST00000250495 CCDC8Q9H0W5 538 aaPredicted RBP25.77■■□□□ 1.72
NEDD8-201ENST00000250495 DBNLQ9UJU6 430 aaKnown RBP25.77■■□□□ 1.72
NEDD8-201ENST00000250495 AGTPBP1Q9UPW5 1226 aa25.77■■□□□ 1.72
NEDD8-201ENST00000250495 MYPNQ86TC9 1320 aa25.77■■□□□ 1.72
NEDD8-201ENST00000250495 PHIPQ8WWQ0 1821 aa25.77■■□□□ 1.72
NEDD8-201ENST00000250495 MS4A1P11836 297 aa25.76■■□□□ 1.71
NEDD8-201ENST00000250495 GRK4P32298 578 aa25.76■■□□□ 1.71
NEDD8-201ENST00000250495 ZAP70P43403 619 aa25.76■■□□□ 1.71
NEDD8-201ENST00000250495 CCDC84Q86UT8 332 aaPredicted RBP25.76■■□□□ 1.71
NEDD8-201ENST00000250495 ZNF280CQ8ND82 737 aa25.76■■□□□ 1.71
NEDD8-201ENST00000250495 EAF2Q96CJ1 260 aaPredicted RBP25.76■■□□□ 1.71
NEDD8-201ENST00000250495 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.76■■□□□ 1.71
NEDD8-201ENST00000250495 PTPRFP10586 1907 aa25.76■■□□□ 1.71
NEDD8-201ENST00000250495 SPP2Q13103 211 aa25.75■■□□□ 1.71
NEDD8-201ENST00000250495 CEP85Q6P2H3 762 aa25.75■■□□□ 1.71
NEDD8-201ENST00000250495 FOXP4Q8IVH2 680 aaPredicted RBP25.75■■□□□ 1.71
NEDD8-201ENST00000250495 PROCA1Q8NCQ7 364 aaPredicted RBP25.75■■□□□ 1.71
NEDD8-201ENST00000250495 TGFBRAP1Q8WUH2 860 aa25.75■■□□□ 1.71
NEDD8-201ENST00000250495 GCC1Q96CN9 775 aa25.75■■□□□ 1.71
NEDD8-201ENST00000250495 PNMA3Q9UL41 463 aa25.75■■□□□ 1.71
NEDD8-201ENST00000250495 USP17L5A8MUK1 530 aa25.74■■□□□ 1.71
NEDD8-201ENST00000250495 ERC1Q8IUD2 1116 aa25.74■■□□□ 1.71
NEDD8-201ENST00000250495 AS3MTQ9HBK9 375 aa25.74■■□□□ 1.71
NEDD8-201ENST00000250495 PABPC4Q13310 644 aaKnown RBP eCLIP25.73■■□□□ 1.715e-9■■■■□ 19.8
NEDD8-201ENST00000250495 MAPKAPK5Q8IW41 473 aa25.73■■□□□ 1.71
NEDD8-201ENST00000250495 PANK1Q8TE04 598 aa25.73■■□□□ 1.71
NEDD8-201ENST00000250495 PIH1D3Q9NQM4 214 aaKnown RBP25.73■■□□□ 1.71
NEDD8-201ENST00000250495 UBXN2AP68543 259 aa25.72■■□□□ 1.71
NEDD8-201ENST00000250495 PRKCZQ05513 592 aa25.72■■□□□ 1.71
NEDD8-201ENST00000250495 ADGRA1Q86SQ6 560 aa25.72■■□□□ 1.71
NEDD8-201ENST00000250495 TLR7Q9NYK1 1049 aaKnown RBP25.72■■□□□ 1.71
NEDD8-201ENST00000250495 BIN2Q9UBW5 565 aaPredicted RBP25.72■■□□□ 1.71
NEDD8-201ENST00000250495 MGAMO43451 1857 aa25.72■■□□□ 1.71
NEDD8-201ENST00000250495 FLT1P17948 1338 aa25.71■■□□□ 1.71
NEDD8-201ENST00000250495 RRP1BQ14684 758 aaKnown RBP25.71■■□□□ 1.71
NEDD8-201ENST00000250495 MTFR1Q15390 333 aa25.71■■□□□ 1.71
NEDD8-201ENST00000250495 HSP90AB4PQ58FF6 505 aa25.71■■□□□ 1.71
NEDD8-201ENST00000250495 TREML2Q5T2D2 321 aa25.71■■□□□ 1.71
NEDD8-201ENST00000250495 CERS3Q8IU89 383 aa25.71■■□□□ 1.71
NEDD8-201ENST00000250495 NKX2-3Q8TAU0 364 aa25.71■■□□□ 1.71
NEDD8-201ENST00000250495 TRIM34Q9BYJ4 488 aa25.71■■□□□ 1.71
NEDD8-201ENST00000250495 MAST2Q6P0Q8 1798 aa25.71■■□□□ 1.71
NEDD8-201ENST00000250495 IDH1O75874 414 aaKnown RBP25.7■■□□□ 1.7
NEDD8-201ENST00000250495 CYP7A1P22680 504 aa25.7■■□□□ 1.7
NEDD8-201ENST00000250495 METTL16Q86W50 562 aaKnown RBP25.7■■□□□ 1.7
NEDD8-201ENST00000250495 CRACR2BQ8N4Y2 399 aaPredicted RBP25.7■■□□□ 1.7
NEDD8-201ENST00000250495 SLAIN1Q8ND83 568 aa25.7■■□□□ 1.7
NEDD8-201ENST00000250495 EXOC6BQ9Y2D4 811 aa25.7■■□□□ 1.7
NEDD8-201ENST00000250495 MYO5AQ9Y4I1 1855 aaKnown RBP25.7■■□□□ 1.7
NEDD8-201ENST00000250495 TNPO2O14787 897 aaKnown RBP25.69■■□□□ 1.7
NEDD8-201ENST00000250495 ASNSP08243 561 aa25.69■■□□□ 1.7
NEDD8-201ENST00000250495 HMGCS2P54868 508 aa25.69■■□□□ 1.7
NEDD8-201ENST00000250495 SH3D19Q5HYK7 790 aa25.69■■□□□ 1.7
NEDD8-201ENST00000250495 TMED8Q6PL24 325 aaPredicted RBP25.69■■□□□ 1.7
NEDD8-201ENST00000250495 ANKRD13CQ8N6S4 541 aa25.69■■□□□ 1.7
NEDD8-201ENST00000250495 WDR18Q9BV38 432 aa25.69■■□□□ 1.7
NEDD8-201ENST00000250495 GINM1Q9NU53 330 aa25.69■■□□□ 1.7
NEDD8-201ENST00000250495 PALD1Q9ULE6 856 aa25.69■■□□□ 1.7
NEDD8-201ENST00000250495 GABRQQ9UN88 632 aa25.69■■□□□ 1.7
NEDD8-201ENST00000250495 ATAD5Q96QE3 1844 aa25.68■■□□□ 1.7
NEDD8-201ENST00000250495 HLA-DOAP06340 250 aa25.68■■□□□ 1.7
NEDD8-201ENST00000250495 GCLCP48506 637 aaPredicted RBP25.68■■□□□ 1.7
NEDD8-201ENST00000250495 AACSQ86V21 672 aa25.68■■□□□ 1.7
NEDD8-201ENST00000250495 CCL5P13501 91 aa25.67■■□□□ 1.7
NEDD8-201ENST00000250495 FLT3LGP49771 235 aa25.67■■□□□ 1.7
NEDD8-201ENST00000250495 DYNLL1P63167 89 aaKnown RBP25.67■■□□□ 1.7
NEDD8-201ENST00000250495 MAP3K12Q12852 859 aa25.67■■□□□ 1.7
NEDD8-201ENST00000250495 FAM110CQ1W6H9 321 aa25.67■■□□□ 1.7
NEDD8-201ENST00000250495 COA7Q96BR5 231 aa25.67■■□□□ 1.7
NEDD8-201ENST00000250495 RNF208Q9H0X6 261 aa25.67■■□□□ 1.7
NEDD8-201ENST00000250495 ADCY3O60266 1144 aa25.66■■□□□ 1.7
NEDD8-201ENST00000250495 GJB1P08034 283 aa25.66■■□□□ 1.7
NEDD8-201ENST00000250495 BACE1P56817 501 aa25.66■■□□□ 1.7
NEDD8-201ENST00000250495 IRF5Q13568 498 aa25.66■■□□□ 1.7
NEDD8-201ENST00000250495 RPAP2Q8IXW5 612 aaPredicted RBP25.66■■□□□ 1.7
NEDD8-201ENST00000250495 MAGEB6Q8N7X4 407 aa25.66■■□□□ 1.7
NEDD8-201ENST00000250495 PXYLP1Q8TE99 480 aa25.66■■□□□ 1.7
NEDD8-201ENST00000250495 CDK5RAP2Q96SN8 1893 aa25.66■■□□□ 1.7
NEDD8-201ENST00000250495 GJA8P48165 433 aa25.65■■□□□ 1.7
NEDD8-201ENST00000250495 RHPN1Q8TCX5 695 aa25.65■■□□□ 1.7
NEDD8-201ENST00000250495 DNAJC18Q9H819 358 aa25.65■■□□□ 1.7
NEDD8-201ENST00000250495 TMOD4Q9NZQ9 345 aa25.65■■□□□ 1.7
NEDD8-201ENST00000250495 SAP30BPQ9UHR5 308 aaKnown RBP25.65■■□□□ 1.7
NEDD8-201ENST00000250495 BRCA2P51587 3418 aa25.65■■□□□ 1.7
NEDD8-201ENST00000250495 FOCADQ5VW36 1801 aa25.65■■□□□ 1.7
NEDD8-201ENST00000250495 MKI67P46013 3256 aaKnown RBP25.64■■□□□ 1.7
NEDD8-201ENST00000250495 C19orf81C9J6K1 198 aa25.64■■□□□ 1.7
NEDD8-201ENST00000250495 USP5P45974 858 aa25.64■■□□□ 1.7
NEDD8-201ENST00000250495 MIGA1Q8NAN2 632 aa25.64■■□□□ 1.7
NEDD8-201ENST00000250495 ASCC2Q9H1I8 757 aaPredicted RBP25.64■■□□□ 1.7
NEDD8-201ENST00000250495 ANTXR1Q9H6X2 564 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms