RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 FBXW7Q969H0 707 aa17.09■□□□□ 0.33
MBD4-201ENST00000249910 ZSCAN10Q96SZ4 725 aaPredicted RBP17.09■□□□□ 0.33
MBD4-201ENST00000249910 DNAJC25Q9H1X3 360 aa17.09■□□□□ 0.33
MBD4-201ENST00000249910 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.09■□□□□ 0.33
MBD4-201ENST00000249910 C4AP0C0L4 1744 aa17.09■□□□□ 0.33
MBD4-201ENST00000249910 COL24A1Q17RW2 1714 aa17.09■□□□□ 0.33
MBD4-201ENST00000249910 BTBD18B2RXH4 712 aa17.09■□□□□ 0.33
MBD4-201ENST00000249910 LDHBP07195 334 aaKnown RBP17.09■□□□□ 0.33
MBD4-201ENST00000249910 NDUFA8P51970 172 aa17.09■□□□□ 0.33
MBD4-201ENST00000249910 CRY2Q49AN0 593 aa17.09■□□□□ 0.33
MBD4-201ENST00000249910 ENGASEQ8NFI3 743 aa17.09■□□□□ 0.33
MBD4-201ENST00000249910 CRNKL1Q9BZJ0 848 aaKnown RBP17.09■□□□□ 0.33
MBD4-201ENST00000249910 POLR3EQ9NVU0 708 aa17.09■□□□□ 0.33
MBD4-201ENST00000249910 MCM9Q9NXL9 1143 aa17.09■□□□□ 0.33
MBD4-201ENST00000249910 LEMD3Q9Y2U8 911 aa17.09■□□□□ 0.33
MBD4-201ENST00000249910 A0A1B0GUL6 1792 aa17.08■□□□□ 0.33
MBD4-201ENST00000249910 FMNL1O95466 1100 aaPredicted RBP17.08■□□□□ 0.33
MBD4-201ENST00000249910 PTMAP06454 111 aaKnown RBP17.08■□□□□ 0.33
MBD4-201ENST00000249910 UVSSAQ2YD98 709 aa17.08■□□□□ 0.33
MBD4-201ENST00000249910 SLC27A3Q5K4L6 730 aa17.08■□□□□ 0.33
MBD4-201ENST00000249910 ANO1Q5XXA6 986 aa17.08■□□□□ 0.33
MBD4-201ENST00000249910 ADALQ6DHV7 355 aa17.08■□□□□ 0.33
MBD4-201ENST00000249910 OLFM4Q6UX06 510 aa17.08■□□□□ 0.33
MBD4-201ENST00000249910 RBM43Q6ZSC3 357 aaKnown RBP17.08■□□□□ 0.33
MBD4-201ENST00000249910 TDRD7Q8NHU6 1098 aaKnown RBP17.08■□□□□ 0.33
MBD4-201ENST00000249910 ZNF830Q96NB3 372 aaPredicted RBP17.08■□□□□ 0.33
MBD4-201ENST00000249910 BAZ2BQ9UIF8 2168 aaKnown RBP17.08■□□□□ 0.32
MBD4-201ENST00000249910 TRIM29Q14134 588 aa17.08■□□□□ 0.32
MBD4-201ENST00000249910 IFIT1BQ5T764 474 aaKnown RBP17.08■□□□□ 0.32
MBD4-201ENST00000249910 SASS6Q6UVJ0 657 aa17.08■□□□□ 0.32
MBD4-201ENST00000249910 NBPF11Q86T75 865 aa17.08■□□□□ 0.32
MBD4-201ENST00000249910 TMTC2Q8N394 836 aa17.08■□□□□ 0.32
MBD4-201ENST00000249910 CRACR2BQ8N4Y2 399 aaPredicted RBP17.08■□□□□ 0.32
MBD4-201ENST00000249910 FAM200AQ8TCP9 573 aa17.08■□□□□ 0.32
MBD4-201ENST00000249910 POLRMTO00411 1230 aaKnown RBP17.07■□□□□ 0.32
MBD4-201ENST00000249910 KINO60870 393 aaKnown RBP17.07■□□□□ 0.32
MBD4-201ENST00000249910 WDHD1O75717 1129 aaPredicted RBP17.07■□□□□ 0.32
MBD4-201ENST00000249910 FAM160A1Q05DH4 1040 aa17.07■□□□□ 0.32
MBD4-201ENST00000249910 POLLQ9UGP5 575 aa17.07■□□□□ 0.32
MBD4-201ENST00000249910 MYH13Q9UKX3 1938 aa17.07■□□□□ 0.32
MBD4-201ENST00000249910 MSNP26038 577 aaKnown RBP17.07■□□□□ 0.32
MBD4-201ENST00000249910 IQCA1Q86XH1 822 aa17.07■□□□□ 0.32
MBD4-201ENST00000249910 SH3RF3Q8TEJ3 882 aaPredicted RBP17.07■□□□□ 0.32
MBD4-201ENST00000249910 MRPS27Q92552 414 aaKnown RBP17.07■□□□□ 0.32
MBD4-201ENST00000249910 CBX8Q9HC52 389 aa17.07■□□□□ 0.32
MBD4-201ENST00000249910 NR5A1Q13285 461 aa17.06■□□□□ 0.32
MBD4-201ENST00000249910 ZNF827Q17R98 1081 aa17.06■□□□□ 0.32
MBD4-201ENST00000249910 TRIM22Q8IYM9 498 aa17.06■□□□□ 0.32
MBD4-201ENST00000249910 KCNG4Q8TDN1 519 aa17.06■□□□□ 0.32
MBD4-201ENST00000249910 DYNLL2Q96FJ2 89 aa17.06■□□□□ 0.32
MBD4-201ENST00000249910 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.06■□□□□ 0.32
MBD4-201ENST00000249910 NOL7Q9UMY1 257 aaKnown RBP17.06■□□□□ 0.32
MBD4-201ENST00000249910 MYH2Q9UKX2 1941 aa17.06■□□□□ 0.32
MBD4-201ENST00000249910 PLEKHA8P1O95397 391 aa17.06■□□□□ 0.32
MBD4-201ENST00000249910 ZNF804AQ7Z570 1209 aa17.06■□□□□ 0.32
MBD4-201ENST00000249910 FMR1NBQ8N0W7 255 aaPredicted RBP17.06■□□□□ 0.32
MBD4-201ENST00000249910 CD209Q9NNX6 404 aa17.06■□□□□ 0.32
MBD4-201ENST00000249910 ATP8A2Q9NTI2 1148 aa17.06■□□□□ 0.32
MBD4-201ENST00000249910 PDS5AQ29RF7 1337 aaKnown RBP17.05■□□□□ 0.32
MBD4-201ENST00000249910 YEATS4O95619 227 aa17.05■□□□□ 0.32
MBD4-201ENST00000249910 U2AF2P26368 475 aaKnown RBP eCLIP17.05■□□□□ 0.326e-12■■■□□ 15.8
MBD4-201ENST00000249910 ZNF165P49910 485 aa17.05■□□□□ 0.32
MBD4-201ENST00000249910 AXDND1Q5T1B0 1012 aaPredicted RBP17.05■□□□□ 0.32
MBD4-201ENST00000249910 DIS3L2Q8IYB7 885 aaKnown RBP17.05■□□□□ 0.32
MBD4-201ENST00000249910 WDR66Q8TBY9 1149 aa17.05■□□□□ 0.32
MBD4-201ENST00000249910 TGFBRAP1Q8WUH2 860 aa17.05■□□□□ 0.32
MBD4-201ENST00000249910 PIBF1Q8WXW3 757 aa17.05■□□□□ 0.32
MBD4-201ENST00000249910 CLIC6Q96NY7 704 aa17.05■□□□□ 0.32
MBD4-201ENST00000249910 SDF4Q9BRK5 362 aa17.05■□□□□ 0.32
MBD4-201ENST00000249910 GGA1Q9UJY5 639 aa17.05■□□□□ 0.32
MBD4-201ENST00000249910 CHD4Q14839 1912 aa17.05■□□□□ 0.32
MBD4-201ENST00000249910 C6orf229H3BNL8 230 aa17.05■□□□□ 0.32
MBD4-201ENST00000249910 ATP2B1P20020 1258 aa17.05■□□□□ 0.32
MBD4-201ENST00000249910 USP5P45974 858 aa17.05■□□□□ 0.32
MBD4-201ENST00000249910 TROAPQ12815 778 aa17.05■□□□□ 0.32
MBD4-201ENST00000249910 OXER1Q8TDS5 423 aa17.05■□□□□ 0.32
MBD4-201ENST00000249910 SHISA4Q96DD7 197 aa17.05■□□□□ 0.32
MBD4-201ENST00000249910 RBM17Q96I25 401 aaKnown RBP17.05■□□□□ 0.32
MBD4-201ENST00000249910 CCDC196A0A1B0GTZ2 297 aa17.04■□□□□ 0.32
MBD4-201ENST00000249910 FGRP09769 529 aa17.04■□□□□ 0.32
MBD4-201ENST00000249910 SLC39A14Q15043 492 aa17.04■□□□□ 0.32
MBD4-201ENST00000249910 SPTY2D1Q68D10 685 aaPredicted RBP17.04■□□□□ 0.32
MBD4-201ENST00000249910 V9GY48 417 aaPredicted RBP17.04■□□□□ 0.32
MBD4-201ENST00000249910 TSPY2A6NKD2 308 aa17.04■□□□□ 0.32
MBD4-201ENST00000249910 MMP1P03956 469 aa17.04■□□□□ 0.32
MBD4-201ENST00000249910 SPECC1Q5M775 1068 aa17.04■□□□□ 0.32
MBD4-201ENST00000249910 C11orf57Q6ZUT1 292 aaPredicted RBP17.04■□□□□ 0.32
MBD4-201ENST00000249910 CATIPQ7Z7H3 387 aa17.04■□□□□ 0.32
MBD4-201ENST00000249910 SPC24Q8NBT2 197 aa17.04■□□□□ 0.32
MBD4-201ENST00000249910 SLC44A5Q8NCS7 719 aa17.04■□□□□ 0.32
MBD4-201ENST00000249910 VPS54Q9P1Q0 977 aa17.04■□□□□ 0.32
MBD4-201ENST00000249910 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.04■□□□□ 0.32
MBD4-201ENST00000249910 TIAM2Q8IVF5 1701 aa17.03■□□□□ 0.32
MBD4-201ENST00000249910 RIMBP2O15034 1052 aa17.03■□□□□ 0.32
MBD4-201ENST00000249910 APBA3O96018 575 aa17.03■□□□□ 0.32
MBD4-201ENST00000249910 HS1BP3Q53T59 392 aa17.03■□□□□ 0.32
MBD4-201ENST00000249910 MAPKAPK5Q8IW41 473 aa17.03■□□□□ 0.32
MBD4-201ENST00000249910 TBC1D16Q8TBP0 767 aa17.03■□□□□ 0.32
MBD4-201ENST00000249910 MAP3K14Q99558 947 aa17.03■□□□□ 0.32
MBD4-201ENST00000249910 TTC12Q9H892 705 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms